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comparison picard_CollectRnaSeqMetrics.xml @ 32:f9242e01365a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 285fab1660daa944d6833ae1e059b30cb1e88309
author iuc
date Mon, 25 Sep 2023 08:32:17 +0000
parents a1f0b3f4b781
children 3f254c5ced1d
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31:585027e65f3b 32:f9242e01365a
55 METRIC_ACCUMULATION_LEVEL="${metric_accumulation_level}" 55 METRIC_ACCUMULATION_LEVEL="${metric_accumulation_level}"
56 INPUT='$escaped_element_identifier' 56 INPUT='$escaped_element_identifier'
57 OUTPUT="${outFile}" 57 OUTPUT="${outFile}"
58 REFERENCE_SEQUENCE="${reference_fasta_filename}" 58 REFERENCE_SEQUENCE="${reference_fasta_filename}"
59 ASSUME_SORTED="${assume_sorted}" 59 ASSUME_SORTED="${assume_sorted}"
60 @TMPDIR_OPTION@
61 VALIDATION_STRINGENCY=${validation_stringency} 60 VALIDATION_STRINGENCY=${validation_stringency}
62 61
63 ]]></command> 62 ]]></command>
64 63
65 <inputs> 64 <inputs>