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comparison picard_CollectWgsMetrics.xml @ 32:f9242e01365a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 285fab1660daa944d6833ae1e059b30cb1e88309
author iuc
date Mon, 25 Sep 2023 08:32:17 +0000
parents 2a17c789e0a5
children 3f254c5ced1d
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31:585027e65f3b 32:f9242e01365a
24 COVERAGE_CAP="${coverage_cap}" 24 COVERAGE_CAP="${coverage_cap}"
25 25
26 VALIDATION_STRINGENCY="${validation_stringency}" 26 VALIDATION_STRINGENCY="${validation_stringency}"
27 QUIET=true 27 QUIET=true
28 VERBOSITY=ERROR 28 VERBOSITY=ERROR
29 @TMPDIR_OPTION@
30 29
31 ]]></command> 30 ]]></command>
32 <inputs> 31 <inputs>
33 <param format="sam,bam" name="inputFile" type="data" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset"/> 32 <param format="sam,bam" name="inputFile" type="data" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset"/>
34 <conditional name="reference_source"> 33 <conditional name="reference_source">