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comparison picard_SortSam.xml @ 32:f9242e01365a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 285fab1660daa944d6833ae1e059b30cb1e88309
author iuc
date Mon, 25 Sep 2023 08:32:17 +0000
parents 2a17c789e0a5
children 3f254c5ced1d
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31:585027e65f3b 32:f9242e01365a
19 INPUT='$escaped_element_identifier' 19 INPUT='$escaped_element_identifier'
20 OUTPUT='${output}' 20 OUTPUT='${output}'
21 SORT_ORDER="${sort_order}" 21 SORT_ORDER="${sort_order}"
22 QUIET=true 22 QUIET=true
23 VERBOSITY=ERROR 23 VERBOSITY=ERROR
24 @TMPDIR_OPTION@
25 VALIDATION_STRINGENCY=${validation_stringency} 24 VALIDATION_STRINGENCY=${validation_stringency}
26 ]]></command> 25 ]]></command>
27 26
28 <inputs> 27 <inputs>
29 <param name="inputFile" type="data" format="sam,bam" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset"/> 28 <param name="inputFile" type="data" format="sam,bam" label="Select SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset"/>