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comparison picard_ValidateSamFile.xml @ 32:f9242e01365a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/picard commit 285fab1660daa944d6833ae1e059b30cb1e88309
author iuc
date Mon, 25 Sep 2023 08:32:17 +0000
parents b502c227b5e6
children 3f254c5ced1d
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31:585027e65f3b 32:f9242e01365a
47 IS_BISULFITE_SEQUENCED="${is_bisulfite_sequenced}" 47 IS_BISULFITE_SEQUENCED="${is_bisulfite_sequenced}"
48 VALIDATE_INDEX="${validate_index}" 48 VALIDATE_INDEX="${validate_index}"
49 MAX_OPEN_TEMP_FILES=`ulimit -Sn` 49 MAX_OPEN_TEMP_FILES=`ulimit -Sn`
50 50
51 VERBOSITY=ERROR 51 VERBOSITY=ERROR
52 @TMPDIR_OPTION@
53 QUIET=true 52 QUIET=true
54 53
55 ]]></command> 54 ]]></command>
56 <inputs> 55 <inputs>
57 <param format="sam,bam" name="inputFile" type="data" label="SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset." /> 56 <param format="sam,bam" name="inputFile" type="data" label="SAM/BAM dataset or dataset collection" help="If empty, upload or import a SAM/BAM dataset." />