--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/picard_output_gc_summary_alignment_stats.txt	Tue Oct 23 13:14:29 2012 -0400
@@ -0,0 +1,102 @@
+## net.sf.picard.metrics.StringHeader
+# net.sf.picard.analysis.CollectGcBiasMetrics REFERENCE_SEQUENCE=testdata/picard/reference/Homo_sapiens_assembly18.trimmed.nodict.fasta INPUT=testdata/picard/sam/summary_alignment_stats_test.sam OUTPUT=output_test_gc_nodict/test_nodic_ref_gc_summary_alignment_stats_test.txt CHART_OUTPUT=output_test_gc_nodict/test_nodic_ref_gc_summary_alignment_stats_test.pdf    WINDOW_SIZE=100 MINIMUM_GENOME_FRACTION=1.0E-5 TMP_DIR=/tmp/raphael VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
+## net.sf.picard.metrics.StringHeader
+# Started on: Tue Oct 26 13:54:53 EDT 2010
+
+## METRICS CLASS	net.sf.picard.analysis.GcBiasDetailMetrics
+GC	WINDOWS	READ_STARTS	MEAN_BASE_QUALITY	NORMALIZED_COVERAGE	ERROR_BAR_WIDTH
+6	3	0	0	0	0
+7	7	0	0	0	0
+8	6	0	0	0	0
+9	45	0	0	0	0
+10	54	0	0	0	0
+11	83	0	0	0	0
+12	110	0	0	0	0
+13	83	0	0	0	0
+14	130	0	0	0	0
+15	178	0	0	0	0
+16	276	0	0	0	0
+17	352	0	0	0	0
+18	519	0	0	0	0
+19	658	0	0	0	0
+20	1073	0	0	0	0
+21	1543	0	0	0	0
+22	2024	0	0	0	0
+23	2631	0	0	0	0
+24	3758	0	0	0	0
+25	5087	0	0	0	0
+26	6543	0	0	0	0
+27	8020	0	0	0	0
+28	10251	0	0	0	0
+29	12241	0	0	0	0
+30	14189	0	0	0	0
+31	16295	0	0	0	0
+32	17995	0	0	0	0
+33	20131	0	0	0	0
+34	22194	0	0	0	0
+35	23848	0	0	0	0
+36	25355	0	0	0	0
+37	27310	0	0	0	0
+38	28274	0	0	0	0
+39	28818	0	0	0	0
+40	28806	0	0	0	0
+41	29651	0	0	0	0
+42	30773	0	0	0	0
+43	31217	0	0	0	0
+44	31743	0	0	0	0
+45	32727	0	0	0	0
+46	34084	0	0	0	0
+47	35307	0	0	0	0
+48	36752	0	0	0	0
+49	36917	0	0	0	0
+50	36561	0	0	0	0
+51	36399	0	0	0	0
+52	35677	0	0	0	0
+53	34354	1	1	29.352448	29.352448
+54	32401	0	0	0	0
+55	30417	0	0	0	0
+56	28588	0	0	0	0
+57	27083	0	0	0	0
+58	24090	0	0	0	0
+59	20995	0	0	0	0
+60	17702	0	0	0	0
+61	14252	0	0	0	0
+62	11595	0	0	0	0
+63	9077	0	0	0	0
+64	6863	0	0	0	0
+65	5394	0	0	0	0
+66	4304	0	0	0	0
+67	3551	0	0	0	0
+68	2776	0	0	0	0
+69	2321	0	0	0	0
+70	1999	0	0	0	0
+71	1777	0	0	0	0
+72	1444	0	0	0	0
+73	1367	0	0	0	0
+74	1182	0	0	0	0
+75	975	0	0	0	0
+76	807	0	0	0	0
+77	852	0	0	0	0
+78	867	0	0	0	0
+79	925	0	0	0	0
+80	786	0	0	0	0
+81	762	0	0	0	0
+82	578	0	0	0	0
+83	475	0	0	0	0
+84	391	0	0	0	0
+85	219	0	0	0	0
+86	184	0	0	0	0
+87	75	0	0	0	0
+88	36	0	0	0	0
+89	37	0	0	0	0
+90	24	0	0	0	0
+91	40	0	0	0	0
+92	33	0	0	0	0
+93	11	0	0	0	0
+94	24	0	0	0	0
+95	12	0	0	0	0
+96	11	0	0	0	0
+97	11	0	0	0	0
+98	9	0	0	0	0
+
+