Mercurial > repos > devteam > quality_filter

comparison quality_filter.xml @ 1:64f5401327e8 draft

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Uploaded tool definition that does not fail on stderr output.
author devteam
date Thu, 30 Oct 2014 15:40:05 -0400
parents 8d65bbc52dfe
children 6c6f15373f96
comparison
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0:8d65bbc52dfe 1:64f5401327e8
20 #else 20 #else
21 ${mask_region.length} 21 ${mask_region.length}
22 #end if 22 #end if
23 ${GALAXY_DATA_INDEX_DIR}/quality_scores.loc 23 ${GALAXY_DATA_INDEX_DIR}/quality_scores.loc
24 </command> 24 </command>
25 <stdio>
26 <exit_code range="1:" level="fatal" description="Error" />
27 </stdio>
25 <inputs> 28 <inputs>
26 <param format="maf" name="input" type="data" label="Select data"/> 29 <param format="maf" name="input" type="data" label="Select data"/>
27 <param name="primary_species" type="select" label="Use quality scores of" display="checkboxes" multiple="true"> 30 <param name="primary_species" type="select" label="Use quality scores of" display="checkboxes" multiple="true">
28 <options> 31 <options>
29 <filter type="data_meta" ref="input" key="species" /> 32 <filter type="data_meta" ref="input" key="species" />