Mercurial > repos > devteam > remove_beginning
view remove_beginning.xml @ 1:bb66956af1eb
Added quotes and brackets to appropriate command arguments
author | greg <greg@bx.psu.edu> |
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date | Mon, 01 Apr 2013 14:32:35 -0400 |
parents | d9b82504a321 |
children | cb8b79d32fa2 |
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<tool id="Remove beginning1" name="Remove beginning"> <description>of a file</description> <command interpreter="perl">remove_beginning.pl "${input}" "${num_lines}" "${out_file1}"</command> <inputs> <param name="num_lines" size="5" type="integer" value="1" label="Remove first" help="lines"/> <param format="txt" name="input" type="data" label="from"/> </inputs> <outputs> <data format="input" name="out_file1" metadata_source="input"/> </outputs> <tests> <test> <param name="num_lines" value="5"/> <param name="input" value="1.bed"/> <output name="out_file1" file="eq-removebeginning.dat"/> </test> </tests> <help> **What it does** This tool removes a specified number of lines from the beginning of a dataset. ----- **Example** Input File:: chr7 56632 56652 D17003_CTCF_R6 310 + chr7 56736 56756 D17003_CTCF_R7 354 + chr7 56761 56781 D17003_CTCF_R4 220 + chr7 56772 56792 D17003_CTCF_R7 372 + chr7 56775 56795 D17003_CTCF_R4 207 + After removing the first 3 lines the dataset will look like this:: chr7 56772 56792 D17003_CTCF_R7 372 + chr7 56775 56795 D17003_CTCF_R4 207 + </help> </tool>