Mercurial > repos > devteam > samtools_flagstat
annotate test-data/samtools_flagstat_out1.txt @ 2:0072bf593791 draft
Uploaded
author | devteam |
---|---|
date | Tue, 21 Apr 2015 15:56:53 -0400 |
parents | 13c4ad597626 |
children | cc61ade70eb8 |
rev | line source |
---|---|
2 | 1 200 + 0 in total (QC-passed reads + QC-failed reads) |
2 0 + 0 secondary | |
3 0 + 0 supplementary | |
0 | 4 0 + 0 duplicates |
2 | 5 25 + 0 mapped (12.50%:nan%) |
6 200 + 0 paired in sequencing | |
7 100 + 0 read1 | |
8 100 + 0 read2 | |
9 0 + 0 properly paired (0.00%:nan%) | |
0 | 10 0 + 0 with itself and mate mapped |
2 | 11 25 + 0 singletons (12.50%:nan%) |
0 | 12 0 + 0 with mate mapped to a different chr |
13 0 + 0 with mate mapped to a different chr (mapQ>=5) |