Mercurial > repos > devteam > samtools_flagstat

annotate test-data/samtools_flagstat_out1.txt @ 6:22970df7a40e draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_flagstat commit 558d30ff047fe2f62658e8b57e27ebe8db77ede1"
author iuc
date Fri, 06 Sep 2019 11:22:29 -0400
parents cc61ade70eb8
children fe34990e5ce7
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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2
0072bf593791 Uploaded
devteam
parents: 0
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1 200 + 0 in total (QC-passed reads + QC-failed reads)
0072bf593791 Uploaded
devteam
parents: 0
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2 0 + 0 secondary
0072bf593791 Uploaded
devteam
parents: 0
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3 0 + 0 supplementary
0
13c4ad597626 Uploaded tool tarball.
devteam
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4 0 + 0 duplicates
3
cc61ade70eb8 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_flagstat commit 411130b45dc30f7f24f41cdeec5e148c5d8faf40
iuc
parents: 2
diff changeset
5 25 + 0 mapped (12.50% : N/A)
2
0072bf593791 Uploaded
devteam
parents: 0
diff changeset
6 200 + 0 paired in sequencing
0072bf593791 Uploaded
devteam
parents: 0
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7 100 + 0 read1
0072bf593791 Uploaded
devteam
parents: 0
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8 100 + 0 read2
3
cc61ade70eb8 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_flagstat commit 411130b45dc30f7f24f41cdeec5e148c5d8faf40
iuc
parents: 2
diff changeset
9 0 + 0 properly paired (0.00% : N/A)
0
13c4ad597626 Uploaded tool tarball.
devteam
parents:
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10 0 + 0 with itself and mate mapped
3
cc61ade70eb8 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_flagstat commit 411130b45dc30f7f24f41cdeec5e148c5d8faf40
iuc
parents: 2
diff changeset
11 25 + 0 singletons (12.50% : N/A)
0
13c4ad597626 Uploaded tool tarball.
devteam
parents:
diff changeset
12 0 + 0 with mate mapped to a different chr
13c4ad597626 Uploaded tool tarball.
devteam
parents:
diff changeset
13 0 + 0 with mate mapped to a different chr (mapQ>=5)