Mercurial > repos > devteam > samtools_flagstat

diff test-data/samtools_flagstat_out1.txt @ 7:fe34990e5ce7 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_flagstat commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
author iuc
date Tue, 28 Sep 2021 16:13:41 +0000
parents cc61ade70eb8
children
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--- a/test-data/samtools_flagstat_out1.txt	Fri Sep 06 11:22:29 2019 -0400
+++ b/test-data/samtools_flagstat_out1.txt	Tue Sep 28 16:13:41 2021 +0000
@@ -1,8 +1,11 @@
 200 + 0 in total (QC-passed reads + QC-failed reads)
+200 + 0 primary
 0 + 0 secondary
 0 + 0 supplementary
 0 + 0 duplicates
+0 + 0 primary duplicates
 25 + 0 mapped (12.50% : N/A)
+25 + 0 primary mapped (12.50% : N/A)
 200 + 0 paired in sequencing
 100 + 0 read1
 100 + 0 read2