Mercurial > repos > devteam > samtools_mpileup

comparison samtools_mpileup.xml @ 12:329deb17a9f7 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_mpileup commit c5ded4208dd70e88596ddc725795a2401773f02d"
author iuc
date Sat, 27 Nov 2021 12:32:35 +0000
parents 111f83918fe6
children 9da0311ab1dd
comparison
equal deleted inserted replaced
11:111f83918fe6 12:329deb17a9f7
11 #set $input_bams = $input 11 #set $input_bams = $input
12 @PREPARE_IDX_MULTIPLE@ 12 @PREPARE_IDX_MULTIPLE@
13 @PREPARE_FASTA_IDX@ 13 @PREPARE_FASTA_IDX@
14 14
15 samtools mpileup 15 samtools mpileup
16 -f '$reffa' 16 -f "\$reffa"
17 #for $i in range(len( $input_bams )): 17 #for $i in range(len( $input_bams )):
18 '${i}' 18 '${i}'
19 #end for 19 #end for
20 20
21 #if str( $advanced_options.advanced_options_selector ) == "advanced": 21 #if str( $advanced_options.advanced_options_selector ) == "advanced":