Mercurial > repos > devteam > samtools_stats
diff test-data/samtools_stats_out1.tab @ 2:24c5d43cb545 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 411130b45dc30f7f24f41cdeec5e148c5d8faf40
author | iuc |
---|---|
date | Tue, 09 May 2017 11:19:01 -0400 |
parents | 0d71d9467847 |
children | 95a7ddf617e7 |
line wrap: on
line diff
--- a/test-data/samtools_stats_out1.tab Wed Nov 11 12:55:15 2015 -0500 +++ b/test-data/samtools_stats_out1.tab Tue May 09 11:19:01 2017 -0400 @@ -1,5 +1,6 @@ -# This file was produced by samtools stats (1.2+htslib-1.2.1) and can be plotted using plot-bamstats -# The command line was: stats --coverage 1,1000,1 --GC-depth 20000.0 --insert-size 8000 --most-inserts 0.99 --trim-quality 0 --ref-seq /Users/anton/galaxy-git/database/files/000/dataset_9.dat /Users/anton/galaxy-git/database/files/000/dataset_10.dat +# This file was produced by samtools stats (1.3.1+htslib-1.3.1) and can be plotted using plot-bamstats +# This file contains statistics for all reads. +# The command line was: stats --coverage 1,1000,1 --GC-depth 20000.0 --insert-size 8000 --most-inserts 0.99 --trim-quality 0 --ref-seq /tmp/tmpO1aTrb/files/000/dataset_2.dat /tmp/tmpO1aTrb/files/000/dataset_1.dat # CHK, Checksum [2]Read Names [3]Sequences [4]Qualities # CHK, CRC32 of reads which passed filtering followed by addition (32bit overflow) CHK 1bd20fd8 58ad2167 29883386 @@ -836,258 +837,258 @@ GCL 52.01 1 GCL 52.51 0 GCL 53.02 1 -# ACGT content per cycle. Use `grep ^GCC | cut -f 2-` to extract this part. The columns are: cycle, and A,C,G,T counts [%] -GCC 1 21.50 29.50 33.50 15.50 -GCC 2 30.00 16.00 11.00 43.00 -GCC 3 33.00 25.00 9.00 33.00 -GCC 4 17.00 29.00 13.00 41.00 -GCC 5 37.00 22.00 12.00 29.00 -GCC 6 36.00 26.00 17.00 21.00 -GCC 7 29.50 13.50 31.50 25.50 -GCC 8 50.50 14.50 19.50 15.50 -GCC 9 17.00 33.00 18.00 32.00 -GCC 10 37.00 14.00 21.00 28.00 -GCC 11 20.50 14.50 29.50 35.50 -GCC 12 30.00 24.00 22.00 24.00 -GCC 13 27.00 15.00 21.00 37.00 -GCC 14 24.00 22.00 26.00 28.00 -GCC 15 25.50 20.50 24.50 29.50 -GCC 16 31.00 15.00 20.00 34.00 -GCC 17 28.00 25.00 14.00 33.00 -GCC 18 30.50 28.50 19.50 21.50 -GCC 19 29.00 26.00 21.00 24.00 -GCC 20 22.50 23.50 17.50 36.50 -GCC 21 35.50 17.50 19.50 27.50 -GCC 22 37.50 28.50 15.50 18.50 -GCC 23 31.00 19.00 13.00 37.00 -GCC 24 37.00 12.00 22.00 29.00 -GCC 25 35.50 22.50 17.50 24.50 -GCC 26 33.50 18.50 15.50 32.50 -GCC 27 34.50 14.50 25.50 25.50 -GCC 28 31.00 14.00 24.00 31.00 -GCC 29 30.00 27.00 24.00 19.00 -GCC 30 31.00 20.00 14.00 35.00 -GCC 31 33.50 29.50 13.50 23.50 -GCC 32 42.50 20.50 19.50 17.50 -GCC 33 25.50 23.50 14.50 36.50 -GCC 34 39.50 16.50 20.50 23.50 -GCC 35 32.50 23.50 21.50 22.50 -GCC 36 42.00 25.00 16.00 17.00 -GCC 37 38.00 17.00 19.00 26.00 -GCC 38 24.00 26.00 25.00 25.00 -GCC 39 22.50 41.50 18.50 17.50 -GCC 40 32.00 16.00 21.00 31.00 -GCC 41 33.00 28.00 19.00 20.00 -GCC 42 30.50 25.50 19.50 24.50 -GCC 43 35.00 29.00 15.00 21.00 -GCC 44 20.00 27.00 22.00 31.00 -GCC 45 40.50 21.50 21.50 16.50 -GCC 46 26.50 20.50 22.50 30.50 -GCC 47 38.50 29.50 16.50 15.50 -GCC 48 27.50 24.50 17.50 30.50 -GCC 49 28.50 32.50 10.50 28.50 -GCC 50 46.50 20.50 9.50 23.50 -GCC 51 34.50 28.50 13.50 23.50 -GCC 52 41.50 23.50 20.50 14.50 -GCC 53 20.00 28.00 26.00 26.00 -GCC 54 31.50 18.50 24.50 25.50 -GCC 55 30.50 22.50 16.50 30.50 -GCC 56 33.50 22.50 13.50 30.50 -GCC 57 23.00 24.00 23.00 30.00 -GCC 58 25.00 37.00 19.00 19.00 -GCC 59 34.00 23.00 24.00 19.00 -GCC 60 29.00 28.00 17.00 26.00 -GCC 61 25.50 23.50 24.50 26.50 -GCC 62 31.50 22.50 16.50 29.50 -GCC 63 27.50 28.50 25.50 18.50 -GCC 64 33.50 21.50 25.50 19.50 -GCC 65 35.50 19.50 18.50 26.50 -GCC 66 34.00 25.00 15.00 26.00 -GCC 67 37.00 23.00 19.00 21.00 -GCC 68 36.50 29.50 13.50 20.50 -GCC 69 38.50 19.50 20.50 21.50 -GCC 70 38.50 16.50 18.50 26.50 -GCC 71 25.50 38.50 21.50 14.50 -GCC 72 29.00 29.00 25.00 17.00 -GCC 73 32.50 20.50 21.50 25.50 -GCC 74 28.50 32.50 12.50 26.50 -GCC 75 41.50 12.50 18.50 27.50 -GCC 76 24.50 29.50 23.50 22.50 -GCC 77 36.00 21.00 18.00 25.00 -GCC 78 27.00 34.00 22.00 17.00 -GCC 79 21.50 26.50 25.50 26.50 -GCC 80 34.00 19.00 28.00 19.00 -GCC 81 17.00 26.00 26.00 31.00 -GCC 82 31.00 30.00 23.00 16.00 -GCC 83 31.50 26.50 12.50 29.50 -GCC 84 19.00 41.00 21.00 19.00 -GCC 85 37.50 24.50 16.50 21.50 -GCC 86 15.00 48.00 15.00 22.00 -GCC 87 41.00 16.00 18.00 25.00 -GCC 88 23.50 27.50 27.50 21.50 -GCC 89 26.50 27.50 26.50 19.50 -GCC 90 18.50 23.50 24.50 33.50 -GCC 91 27.00 32.00 22.00 19.00 -GCC 92 23.50 17.50 27.50 31.50 -GCC 93 25.50 37.50 15.50 21.50 -GCC 94 27.00 17.00 24.00 32.00 -GCC 95 26.50 37.50 14.50 21.50 -GCC 96 29.50 25.50 16.50 28.50 -GCC 97 29.00 31.00 21.00 19.00 -GCC 98 18.00 33.00 22.00 27.00 -GCC 99 24.50 33.50 24.50 17.50 -GCC 100 24.50 16.50 24.50 34.50 -GCC 101 25.00 40.00 19.00 16.00 -GCC 102 17.50 17.50 32.50 32.50 -GCC 103 31.00 26.00 16.00 27.00 -GCC 104 26.50 29.50 20.50 23.50 -GCC 105 34.00 33.00 21.00 12.00 -GCC 106 23.00 31.00 26.00 20.00 -GCC 107 17.50 35.50 23.50 23.50 -GCC 108 24.50 30.50 23.50 21.50 -GCC 109 17.00 31.00 22.00 30.00 -GCC 110 16.00 35.00 24.00 25.00 -GCC 111 24.00 32.00 23.00 21.00 -GCC 112 37.00 28.00 16.00 19.00 -GCC 113 19.50 22.50 32.50 25.50 -GCC 114 17.00 31.00 35.00 17.00 -GCC 115 29.50 24.50 23.50 22.50 -GCC 116 22.00 30.00 34.00 14.00 -GCC 117 27.00 23.00 19.00 31.00 -GCC 118 25.50 14.50 34.50 25.50 -GCC 119 22.50 34.50 20.50 22.50 -GCC 120 17.50 24.50 26.50 31.50 -GCC 121 27.50 33.50 22.50 16.50 -GCC 122 17.00 23.00 25.00 35.00 -GCC 123 23.50 46.50 11.50 18.50 -GCC 124 9.00 32.00 34.00 25.00 -GCC 125 24.00 27.00 19.00 30.00 -GCC 126 26.00 17.00 28.00 29.00 -GCC 127 26.50 16.50 21.50 35.50 -GCC 128 18.00 34.00 31.00 17.00 -GCC 129 25.50 25.50 27.50 21.50 -GCC 130 25.00 20.00 22.00 33.00 -GCC 131 17.50 39.50 24.50 18.50 -GCC 132 21.00 28.00 23.00 28.00 -GCC 133 13.50 31.50 35.50 19.50 -GCC 134 24.50 19.50 30.50 25.50 -GCC 135 16.50 23.50 30.50 29.50 -GCC 136 28.00 32.00 15.00 25.00 -GCC 137 22.50 21.50 30.50 25.50 -GCC 138 14.50 34.50 24.50 26.50 -GCC 139 20.50 29.50 24.50 25.50 -GCC 140 17.00 23.00 30.00 30.00 -GCC 141 20.50 23.50 25.50 30.50 -GCC 142 18.00 29.00 38.00 15.00 -GCC 143 22.00 24.00 27.00 27.00 -GCC 144 21.50 30.50 26.50 21.50 -GCC 145 22.00 21.00 29.00 28.00 -GCC 146 25.00 16.00 39.00 20.00 -GCC 147 26.50 22.50 30.50 20.50 -GCC 148 12.50 28.50 36.50 22.50 -GCC 149 26.50 23.50 23.50 26.50 -GCC 150 14.00 29.00 24.00 33.00 -GCC 151 19.50 30.50 32.50 17.50 -GCC 152 18.50 17.50 29.50 34.50 -GCC 153 22.50 22.50 31.50 23.50 -GCC 154 22.00 21.00 29.00 28.00 -GCC 155 21.00 26.00 19.00 34.00 -GCC 156 14.50 23.50 35.50 26.50 -GCC 157 22.00 31.00 23.00 24.00 -GCC 158 22.50 29.50 24.50 23.50 -GCC 159 17.50 12.50 46.50 23.50 -GCC 160 24.50 26.50 26.50 22.50 -GCC 161 13.00 23.00 45.00 19.00 -GCC 162 31.50 16.50 22.50 29.50 -GCC 163 19.50 21.50 35.50 23.50 -GCC 164 29.00 18.00 21.00 32.00 -GCC 165 14.50 17.50 35.50 32.50 -GCC 166 17.50 37.50 28.50 16.50 -GCC 167 16.50 21.50 31.50 30.50 -GCC 168 14.00 25.00 30.00 31.00 -GCC 169 18.50 20.50 23.50 37.50 -GCC 170 19.00 23.00 28.00 30.00 -GCC 171 20.00 28.00 33.00 19.00 -GCC 172 19.00 20.00 32.00 29.00 -GCC 173 24.50 16.50 33.50 25.50 -GCC 174 17.50 23.50 33.50 25.50 -GCC 175 33.50 17.50 35.50 13.50 -GCC 176 16.50 32.50 28.50 22.50 -GCC 177 19.00 22.00 27.00 32.00 -GCC 178 16.00 26.00 30.00 28.00 -GCC 179 18.00 18.00 22.00 42.00 -GCC 180 21.00 22.00 34.00 23.00 -GCC 181 20.50 19.50 35.50 24.50 -GCC 182 32.50 18.50 22.50 26.50 -GCC 183 24.50 13.50 28.50 33.50 -GCC 184 15.00 29.00 30.00 26.00 -GCC 185 15.00 32.00 33.00 20.00 -GCC 186 22.50 23.50 34.50 19.50 -GCC 187 19.00 14.00 40.00 27.00 -GCC 188 27.50 21.50 27.50 23.50 -GCC 189 17.00 22.00 34.00 27.00 -GCC 190 23.00 30.00 23.00 24.00 -GCC 191 25.00 22.00 28.00 25.00 -GCC 192 34.50 24.50 13.50 27.50 -GCC 193 18.50 25.50 25.50 30.50 -GCC 194 18.50 33.50 24.50 23.50 -GCC 195 16.00 26.00 23.00 35.00 -GCC 196 21.50 25.50 24.50 28.50 -GCC 197 20.00 21.00 23.00 36.00 -GCC 198 17.00 21.00 37.00 25.00 -GCC 199 20.50 18.50 25.50 35.50 -GCC 200 21.00 29.00 21.00 29.00 -GCC 201 27.00 21.00 23.00 29.00 -GCC 202 21.50 24.50 19.50 34.50 -GCC 203 21.50 24.50 26.50 27.50 -GCC 204 27.00 29.00 24.00 20.00 -GCC 205 19.50 21.50 22.50 36.50 -GCC 206 26.50 24.50 21.50 27.50 -GCC 207 22.50 21.50 19.50 36.50 -GCC 208 14.00 35.00 29.00 22.00 -GCC 209 16.00 23.00 12.00 49.00 -GCC 210 18.50 19.50 40.50 21.50 -GCC 211 26.00 20.00 22.00 32.00 -GCC 212 21.00 31.00 18.00 30.00 -GCC 213 24.00 15.00 31.00 30.00 -GCC 214 17.50 24.50 25.50 32.50 -GCC 215 26.00 24.00 23.00 27.00 -GCC 216 21.50 17.50 25.50 35.50 -GCC 217 26.00 29.00 17.00 28.00 -GCC 218 20.00 27.00 21.00 32.00 -GCC 219 17.00 21.00 21.00 41.00 -GCC 220 25.50 23.50 23.50 27.50 -GCC 221 21.50 23.50 20.50 34.50 -GCC 222 21.50 21.50 18.50 38.50 -GCC 223 20.00 27.00 28.00 25.00 -GCC 224 22.50 22.50 24.50 30.50 -GCC 225 14.50 35.50 30.50 19.50 -GCC 226 20.00 23.00 26.00 31.00 -GCC 227 20.50 24.50 23.50 31.50 -GCC 228 33.00 19.00 26.00 22.00 -GCC 229 22.50 24.50 18.50 34.50 -GCC 230 21.00 32.00 16.00 31.00 -GCC 231 23.00 28.00 30.00 19.00 -GCC 232 23.50 21.50 12.50 42.50 -GCC 233 21.00 27.00 25.00 27.00 -GCC 234 16.50 27.50 22.50 33.50 -GCC 235 20.00 15.00 28.00 37.00 -GCC 236 28.00 23.00 21.00 28.00 -GCC 237 20.50 19.50 22.50 37.50 -GCC 238 21.50 29.50 24.50 24.50 -GCC 239 20.00 8.00 17.00 55.00 -GCC 240 28.00 24.00 16.00 32.00 -GCC 241 22.50 22.50 16.50 38.50 -GCC 242 29.00 25.00 13.00 33.00 -GCC 243 22.50 15.50 23.50 38.50 -GCC 244 20.50 23.50 16.50 39.50 -GCC 245 28.00 23.00 19.00 30.00 -GCC 246 21.00 29.00 25.00 25.00 -GCC 247 32.00 14.00 13.00 41.00 -GCC 248 18.00 18.00 25.00 39.00 -GCC 249 25.00 23.00 21.00 31.00 -GCC 250 27.50 22.50 17.50 32.50 -GCC 251 13.50 20.50 36.50 29.50 +# ACGT content per cycle. Use `grep ^GCC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%] +GCC 1 21.94 30.10 34.18 13.78 2.04 0.00 +GCC 2 30.00 16.00 11.00 43.00 0.00 0.00 +GCC 3 33.00 25.00 9.00 33.00 0.00 0.00 +GCC 4 17.00 29.00 13.00 41.00 0.00 0.00 +GCC 5 37.00 22.00 12.00 29.00 0.00 0.00 +GCC 6 36.00 26.00 17.00 21.00 0.00 0.00 +GCC 7 29.50 13.50 31.50 25.50 0.00 0.00 +GCC 8 50.50 14.50 19.50 15.50 0.00 0.00 +GCC 9 17.00 33.00 18.00 32.00 0.00 0.00 +GCC 10 37.00 14.00 21.00 28.00 0.00 0.00 +GCC 11 20.50 14.50 29.50 35.50 0.00 0.00 +GCC 12 30.00 24.00 22.00 24.00 0.00 0.00 +GCC 13 27.00 15.00 21.00 37.00 0.00 0.00 +GCC 14 24.24 22.22 26.26 27.27 1.01 0.00 +GCC 15 25.50 20.50 24.50 29.50 0.00 0.00 +GCC 16 31.00 15.00 20.00 34.00 0.00 0.00 +GCC 17 28.00 25.00 14.00 33.00 0.00 0.00 +GCC 18 30.50 28.50 19.50 21.50 0.00 0.00 +GCC 19 29.00 26.00 21.00 24.00 0.00 0.00 +GCC 20 22.50 23.50 17.50 36.50 0.00 0.00 +GCC 21 35.50 17.50 19.50 27.50 0.00 0.00 +GCC 22 37.50 28.50 15.50 18.50 0.00 0.00 +GCC 23 31.31 19.19 13.13 36.36 1.01 0.00 +GCC 24 37.00 12.00 22.00 29.00 0.00 0.00 +GCC 25 35.50 22.50 17.50 24.50 0.00 0.00 +GCC 26 33.50 18.50 15.50 32.50 0.00 0.00 +GCC 27 34.50 14.50 25.50 25.50 0.00 0.00 +GCC 28 31.00 14.00 24.00 31.00 0.00 0.00 +GCC 29 30.00 27.00 24.00 19.00 0.00 0.00 +GCC 30 31.00 20.00 14.00 35.00 0.00 0.00 +GCC 31 33.50 29.50 13.50 23.50 0.00 0.00 +GCC 32 42.50 20.50 19.50 17.50 0.00 0.00 +GCC 33 25.50 23.50 14.50 36.50 0.00 0.00 +GCC 34 39.50 16.50 20.50 23.50 0.00 0.00 +GCC 35 32.50 23.50 21.50 22.50 0.00 0.00 +GCC 36 42.00 25.00 16.00 17.00 0.00 0.00 +GCC 37 38.00 17.00 19.00 26.00 0.00 0.00 +GCC 38 24.00 26.00 25.00 25.00 0.00 0.00 +GCC 39 22.50 41.50 18.50 17.50 0.00 0.00 +GCC 40 32.00 16.00 21.00 31.00 0.00 0.00 +GCC 41 33.00 28.00 19.00 20.00 0.00 0.00 +GCC 42 30.50 25.50 19.50 24.50 0.00 0.00 +GCC 43 35.00 29.00 15.00 21.00 0.00 0.00 +GCC 44 20.00 27.00 22.00 31.00 0.00 0.00 +GCC 45 40.50 21.50 21.50 16.50 0.00 0.00 +GCC 46 26.50 20.50 22.50 30.50 0.00 0.00 +GCC 47 38.50 29.50 16.50 15.50 0.00 0.00 +GCC 48 27.50 24.50 17.50 30.50 0.00 0.00 +GCC 49 28.50 32.50 10.50 28.50 0.00 0.00 +GCC 50 46.50 20.50 9.50 23.50 0.00 0.00 +GCC 51 34.50 28.50 13.50 23.50 0.00 0.00 +GCC 52 41.50 23.50 20.50 14.50 0.00 0.00 +GCC 53 20.00 28.00 26.00 26.00 0.00 0.00 +GCC 54 31.50 18.50 24.50 25.50 0.00 0.00 +GCC 55 30.50 22.50 16.50 30.50 0.00 0.00 +GCC 56 33.50 22.50 13.50 30.50 0.00 0.00 +GCC 57 23.00 24.00 23.00 30.00 0.00 0.00 +GCC 58 25.00 37.00 19.00 19.00 0.00 0.00 +GCC 59 34.00 23.00 24.00 19.00 0.00 0.00 +GCC 60 29.00 28.00 17.00 26.00 0.00 0.00 +GCC 61 25.50 23.50 24.50 26.50 0.00 0.00 +GCC 62 31.50 22.50 16.50 29.50 0.00 0.00 +GCC 63 27.50 28.50 25.50 18.50 0.00 0.00 +GCC 64 33.50 21.50 25.50 19.50 0.00 0.00 +GCC 65 35.50 19.50 18.50 26.50 0.00 0.00 +GCC 66 34.00 25.00 15.00 26.00 0.00 0.00 +GCC 67 37.00 23.00 19.00 21.00 0.00 0.00 +GCC 68 36.50 29.50 13.50 20.50 0.00 0.00 +GCC 69 38.50 19.50 20.50 21.50 0.00 0.00 +GCC 70 38.50 16.50 18.50 26.50 0.00 0.00 +GCC 71 25.50 38.50 21.50 14.50 0.00 0.00 +GCC 72 29.00 29.00 25.00 17.00 0.00 0.00 +GCC 73 32.50 20.50 21.50 25.50 0.00 0.00 +GCC 74 28.50 32.50 12.50 26.50 0.00 0.00 +GCC 75 41.50 12.50 18.50 27.50 0.00 0.00 +GCC 76 24.50 29.50 23.50 22.50 0.00 0.00 +GCC 77 36.00 21.00 18.00 25.00 0.00 0.00 +GCC 78 27.00 34.00 22.00 17.00 0.00 0.00 +GCC 79 21.50 26.50 25.50 26.50 0.00 0.00 +GCC 80 34.00 19.00 28.00 19.00 0.00 0.00 +GCC 81 17.00 26.00 26.00 31.00 0.00 0.00 +GCC 82 31.00 30.00 23.00 16.00 0.00 0.00 +GCC 83 31.50 26.50 12.50 29.50 0.00 0.00 +GCC 84 19.00 41.00 21.00 19.00 0.00 0.00 +GCC 85 37.50 24.50 16.50 21.50 0.00 0.00 +GCC 86 15.00 48.00 15.00 22.00 0.00 0.00 +GCC 87 41.00 16.00 18.00 25.00 0.00 0.00 +GCC 88 23.50 27.50 27.50 21.50 0.00 0.00 +GCC 89 26.50 27.50 26.50 19.50 0.00 0.00 +GCC 90 18.50 23.50 24.50 33.50 0.00 0.00 +GCC 91 27.00 32.00 22.00 19.00 0.00 0.00 +GCC 92 23.50 17.50 27.50 31.50 0.00 0.00 +GCC 93 25.50 37.50 15.50 21.50 0.00 0.00 +GCC 94 27.00 17.00 24.00 32.00 0.00 0.00 +GCC 95 26.77 37.88 14.65 20.71 1.01 0.00 +GCC 96 29.50 25.50 16.50 28.50 0.00 0.00 +GCC 97 29.00 31.00 21.00 19.00 0.00 0.00 +GCC 98 18.18 33.33 22.22 26.26 1.01 0.00 +GCC 99 24.50 33.50 24.50 17.50 0.00 0.00 +GCC 100 24.50 16.50 24.50 34.50 0.00 0.00 +GCC 101 25.00 40.00 19.00 16.00 0.00 0.00 +GCC 102 17.50 17.50 32.50 32.50 0.00 0.00 +GCC 103 31.00 26.00 16.00 27.00 0.00 0.00 +GCC 104 26.50 29.50 20.50 23.50 0.00 0.00 +GCC 105 34.00 33.00 21.00 12.00 0.00 0.00 +GCC 106 23.00 31.00 26.00 20.00 0.00 0.00 +GCC 107 17.68 35.86 23.74 22.73 1.01 0.00 +GCC 108 24.75 30.81 23.74 20.71 1.01 0.00 +GCC 109 17.00 31.00 22.00 30.00 0.00 0.00 +GCC 110 16.16 35.35 24.24 24.24 1.01 0.00 +GCC 111 24.24 32.32 23.23 20.20 1.01 0.00 +GCC 112 37.37 28.28 16.16 18.18 1.01 0.00 +GCC 113 19.70 22.73 32.83 24.75 1.01 0.00 +GCC 114 17.00 31.00 35.00 17.00 0.00 0.00 +GCC 115 29.50 24.50 23.50 22.50 0.00 0.00 +GCC 116 22.00 30.00 34.00 14.00 0.00 0.00 +GCC 117 27.00 23.00 19.00 31.00 0.00 0.00 +GCC 118 25.50 14.50 34.50 25.50 0.00 0.00 +GCC 119 22.50 34.50 20.50 22.50 0.00 0.00 +GCC 120 17.50 24.50 26.50 31.50 0.00 0.00 +GCC 121 27.78 33.84 22.73 15.66 1.01 0.00 +GCC 122 17.00 23.00 25.00 35.00 0.00 0.00 +GCC 123 23.50 46.50 11.50 18.50 0.00 0.00 +GCC 124 9.00 32.00 34.00 25.00 0.00 0.00 +GCC 125 24.00 27.00 19.00 30.00 0.00 0.00 +GCC 126 26.00 17.00 28.00 29.00 0.00 0.00 +GCC 127 26.50 16.50 21.50 35.50 0.00 0.00 +GCC 128 18.00 34.00 31.00 17.00 0.00 0.00 +GCC 129 25.50 25.50 27.50 21.50 0.00 0.00 +GCC 130 25.00 20.00 22.00 33.00 0.00 0.00 +GCC 131 17.50 39.50 24.50 18.50 0.00 0.00 +GCC 132 21.00 28.00 23.00 28.00 0.00 0.00 +GCC 133 13.50 31.50 35.50 19.50 0.00 0.00 +GCC 134 24.50 19.50 30.50 25.50 0.00 0.00 +GCC 135 16.50 23.50 30.50 29.50 0.00 0.00 +GCC 136 28.00 32.00 15.00 25.00 0.00 0.00 +GCC 137 22.50 21.50 30.50 25.50 0.00 0.00 +GCC 138 14.50 34.50 24.50 26.50 0.00 0.00 +GCC 139 20.50 29.50 24.50 25.50 0.00 0.00 +GCC 140 17.00 23.00 30.00 30.00 0.00 0.00 +GCC 141 20.50 23.50 25.50 30.50 0.00 0.00 +GCC 142 18.00 29.00 38.00 15.00 0.00 0.00 +GCC 143 22.00 24.00 27.00 27.00 0.00 0.00 +GCC 144 21.50 30.50 26.50 21.50 0.00 0.00 +GCC 145 22.00 21.00 29.00 28.00 0.00 0.00 +GCC 146 25.00 16.00 39.00 20.00 0.00 0.00 +GCC 147 26.50 22.50 30.50 20.50 0.00 0.00 +GCC 148 12.50 28.50 36.50 22.50 0.00 0.00 +GCC 149 26.50 23.50 23.50 26.50 0.00 0.00 +GCC 150 14.00 29.00 24.00 33.00 0.00 0.00 +GCC 151 19.50 30.50 32.50 17.50 0.00 0.00 +GCC 152 18.50 17.50 29.50 34.50 0.00 0.00 +GCC 153 22.50 22.50 31.50 23.50 0.00 0.00 +GCC 154 22.00 21.00 29.00 28.00 0.00 0.00 +GCC 155 21.00 26.00 19.00 34.00 0.00 0.00 +GCC 156 14.50 23.50 35.50 26.50 0.00 0.00 +GCC 157 22.00 31.00 23.00 24.00 0.00 0.00 +GCC 158 22.50 29.50 24.50 23.50 0.00 0.00 +GCC 159 17.50 12.50 46.50 23.50 0.00 0.00 +GCC 160 24.50 26.50 26.50 22.50 0.00 0.00 +GCC 161 13.00 23.00 45.00 19.00 0.00 0.00 +GCC 162 31.50 16.50 22.50 29.50 0.00 0.00 +GCC 163 19.50 21.50 35.50 23.50 0.00 0.00 +GCC 164 29.00 18.00 21.00 32.00 0.00 0.00 +GCC 165 14.50 17.50 35.50 32.50 0.00 0.00 +GCC 166 17.50 37.50 28.50 16.50 0.00 0.00 +GCC 167 16.50 21.50 31.50 30.50 0.00 0.00 +GCC 168 14.00 25.00 30.00 31.00 0.00 0.00 +GCC 169 18.50 20.50 23.50 37.50 0.00 0.00 +GCC 170 19.00 23.00 28.00 30.00 0.00 0.00 +GCC 171 20.00 28.00 33.00 19.00 0.00 0.00 +GCC 172 19.00 20.00 32.00 29.00 0.00 0.00 +GCC 173 24.50 16.50 33.50 25.50 0.00 0.00 +GCC 174 17.50 23.50 33.50 25.50 0.00 0.00 +GCC 175 33.50 17.50 35.50 13.50 0.00 0.00 +GCC 176 16.50 32.50 28.50 22.50 0.00 0.00 +GCC 177 19.00 22.00 27.00 32.00 0.00 0.00 +GCC 178 16.00 26.00 30.00 28.00 0.00 0.00 +GCC 179 18.00 18.00 22.00 42.00 0.00 0.00 +GCC 180 21.00 22.00 34.00 23.00 0.00 0.00 +GCC 181 20.50 19.50 35.50 24.50 0.00 0.00 +GCC 182 32.50 18.50 22.50 26.50 0.00 0.00 +GCC 183 24.50 13.50 28.50 33.50 0.00 0.00 +GCC 184 15.00 29.00 30.00 26.00 0.00 0.00 +GCC 185 15.00 32.00 33.00 20.00 0.00 0.00 +GCC 186 22.50 23.50 34.50 19.50 0.00 0.00 +GCC 187 19.00 14.00 40.00 27.00 0.00 0.00 +GCC 188 27.50 21.50 27.50 23.50 0.00 0.00 +GCC 189 17.00 22.00 34.00 27.00 0.00 0.00 +GCC 190 23.00 30.00 23.00 24.00 0.00 0.00 +GCC 191 25.00 22.00 28.00 25.00 0.00 0.00 +GCC 192 34.50 24.50 13.50 27.50 0.00 0.00 +GCC 193 18.50 25.50 25.50 30.50 0.00 0.00 +GCC 194 18.50 33.50 24.50 23.50 0.00 0.00 +GCC 195 16.00 26.00 23.00 35.00 0.00 0.00 +GCC 196 21.50 25.50 24.50 28.50 0.00 0.00 +GCC 197 20.00 21.00 23.00 36.00 0.00 0.00 +GCC 198 17.00 21.00 37.00 25.00 0.00 0.00 +GCC 199 20.50 18.50 25.50 35.50 0.00 0.00 +GCC 200 21.00 29.00 21.00 29.00 0.00 0.00 +GCC 201 27.00 21.00 23.00 29.00 0.00 0.00 +GCC 202 21.50 24.50 19.50 34.50 0.00 0.00 +GCC 203 21.50 24.50 26.50 27.50 0.00 0.00 +GCC 204 27.00 29.00 24.00 20.00 0.00 0.00 +GCC 205 19.50 21.50 22.50 36.50 0.00 0.00 +GCC 206 26.50 24.50 21.50 27.50 0.00 0.00 +GCC 207 22.50 21.50 19.50 36.50 0.00 0.00 +GCC 208 14.00 35.00 29.00 22.00 0.00 0.00 +GCC 209 16.00 23.00 12.00 49.00 0.00 0.00 +GCC 210 18.50 19.50 40.50 21.50 0.00 0.00 +GCC 211 26.00 20.00 22.00 32.00 0.00 0.00 +GCC 212 21.00 31.00 18.00 30.00 0.00 0.00 +GCC 213 24.00 15.00 31.00 30.00 0.00 0.00 +GCC 214 17.50 24.50 25.50 32.50 0.00 0.00 +GCC 215 26.00 24.00 23.00 27.00 0.00 0.00 +GCC 216 21.50 17.50 25.50 35.50 0.00 0.00 +GCC 217 26.00 29.00 17.00 28.00 0.00 0.00 +GCC 218 20.00 27.00 21.00 32.00 0.00 0.00 +GCC 219 17.00 21.00 21.00 41.00 0.00 0.00 +GCC 220 25.50 23.50 23.50 27.50 0.00 0.00 +GCC 221 21.50 23.50 20.50 34.50 0.00 0.00 +GCC 222 21.50 21.50 18.50 38.50 0.00 0.00 +GCC 223 20.00 27.00 28.00 25.00 0.00 0.00 +GCC 224 22.50 22.50 24.50 30.50 0.00 0.00 +GCC 225 14.50 35.50 30.50 19.50 0.00 0.00 +GCC 226 20.00 23.00 26.00 31.00 0.00 0.00 +GCC 227 20.50 24.50 23.50 31.50 0.00 0.00 +GCC 228 33.00 19.00 26.00 22.00 0.00 0.00 +GCC 229 22.50 24.50 18.50 34.50 0.00 0.00 +GCC 230 21.00 32.00 16.00 31.00 0.00 0.00 +GCC 231 23.00 28.00 30.00 19.00 0.00 0.00 +GCC 232 23.50 21.50 12.50 42.50 0.00 0.00 +GCC 233 21.00 27.00 25.00 27.00 0.00 0.00 +GCC 234 16.50 27.50 22.50 33.50 0.00 0.00 +GCC 235 20.00 15.00 28.00 37.00 0.00 0.00 +GCC 236 28.00 23.00 21.00 28.00 0.00 0.00 +GCC 237 20.50 19.50 22.50 37.50 0.00 0.00 +GCC 238 21.50 29.50 24.50 24.50 0.00 0.00 +GCC 239 20.00 8.00 17.00 55.00 0.00 0.00 +GCC 240 28.00 24.00 16.00 32.00 0.00 0.00 +GCC 241 22.50 22.50 16.50 38.50 0.00 0.00 +GCC 242 29.00 25.00 13.00 33.00 0.00 0.00 +GCC 243 22.50 15.50 23.50 38.50 0.00 0.00 +GCC 244 20.50 23.50 16.50 39.50 0.00 0.00 +GCC 245 28.00 23.00 19.00 30.00 0.00 0.00 +GCC 246 21.00 29.00 25.00 25.00 0.00 0.00 +GCC 247 32.00 14.00 13.00 41.00 0.00 0.00 +GCC 248 18.00 18.00 25.00 39.00 0.00 0.00 +GCC 249 25.00 23.00 21.00 31.00 0.00 0.00 +GCC 250 27.50 22.50 17.50 32.50 0.00 0.00 +GCC 251 13.50 20.50 36.50 29.50 0.00 0.00 # Insert sizes. Use `grep ^IS | cut -f 2-` to extract this part. The columns are: insert size, pairs total, inward oriented pairs, outward oriented pairs, other pairs # Read lengths. Use `grep ^RL | cut -f 2-` to extract this part. The columns are: read length, count RL 251 200