Mercurial > repos > devteam > samtools_stats
view test-data/samtools_stats_out1.tab @ 12:541082d03bef draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_stats commit 9c5a35ce695c3d134e41d8695487edd5f71ea33c
| author | iuc |
|---|---|
| date | Sun, 08 Sep 2024 03:27:04 +0000 |
| parents | e28839a4b932 |
| children |
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# This file was produced by samtools stats (1.20+htslib-1.20) and can be plotted using plot-bamstats # This file contains statistics for all reads. # The command line was: stats --ref-seq reference.fa -@ 0 infile # CHK, Checksum [2]Read Names [3]Sequences [4]Qualities # CHK, CRC32 of reads which passed filtering followed by addition (32bit overflow) CHK 1bd20fd8 58ad2167 29883386 # Summary Numbers. Use `grep ^SN | cut -f 2-` to extract this part. SN raw total sequences: 200 # excluding supplementary and secondary reads SN filtered sequences: 0 SN sequences: 200 SN is sorted: 1 SN 1st fragments: 100 SN last fragments: 100 SN reads mapped: 25 SN reads mapped and paired: 0 # paired-end technology bit set + both mates mapped SN reads unmapped: 175 SN reads properly paired: 0 # proper-pair bit set SN reads paired: 200 # paired-end technology bit set SN reads duplicated: 0 # PCR or optical duplicate bit set SN reads MQ0: 6 # mapped and MQ=0 SN reads QC failed: 0 SN non-primary alignments: 0 SN supplementary alignments: 0 SN total length: 50200 # ignores clipping SN total first fragment length: 25100 # ignores clipping SN total last fragment length: 25100 # ignores clipping SN bases mapped: 6275 # ignores clipping SN bases mapped (cigar): 6275 # more accurate SN bases trimmed: 0 SN bases duplicated: 0 SN mismatches: 591 # from NM fields SN error rate: 9.418327e-02 # mismatches / bases mapped (cigar) SN average length: 251 SN average first fragment length: 251 SN average last fragment length: 251 SN maximum length: 251 SN maximum first fragment length: 251 SN maximum last fragment length: 251 SN average quality: 34.7 SN insert size average: 0.0 SN insert size standard deviation: 0.0 SN inward oriented pairs: 0 SN outward oriented pairs: 0 SN pairs with other orientation: 0 SN pairs on different chromosomes: 0 SN percentage of properly paired reads (%): 0.0 # First Fragment Qualities. Use `grep ^FFQ | cut -f 2-` to extract this part. # Columns correspond to qualities and rows to cycles. First column is the cycle number. FFQ 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 3 2 0 20 38 32 1 0 0 0 0 0 0 FFQ 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 3 0 0 18 36 36 6 0 0 0 0 0 0 FFQ 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 14 31 46 5 0 0 0 0 0 0 FFQ 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 8 36 42 11 0 0 0 0 0 0 FFQ 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 12 35 43 6 0 0 0 0 0 0 FFQ 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 7 8 0 0 81 0 0 0 0 FFQ 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 13 1 0 76 0 0 0 0 FFQ 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 11 15 4 0 69 0 0 0 0 FFQ 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 6 20 3 0 68 0 0 0 0 FFQ 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 11 5 0 75 0 0 0 0 FFQ 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 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0 0 0 0 0 1 2 0 1 1 0 0 0 0 0 0 0 1 0 2 2 1 0 2 1 1 3 11 3 2 34 14 18 0 0 FFQ 162 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 0 0 1 3 1 0 0 0 3 3 4 9 4 6 36 12 14 0 0 FFQ 163 0 0 0 0 0 0 0 0 0 0 0 0 2 1 4 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 1 1 3 1 6 5 3 38 17 14 0 0 FFQ 164 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 1 0 1 2 0 0 1 1 3 1 9 5 4 39 16 13 0 0 FFQ 165 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 2 5 0 6 8 2 39 15 15 0 0 FFQ 166 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 3 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 3 3 3 0 6 43 13 22 0 0 FFQ 167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 3 1 0 0 0 0 0 0 0 0 3 2 0 0 0 2 0 0 4 5 3 10 36 13 16 0 0 FFQ 168 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 1 0 0 0 0 0 0 0 0 0 2 1 1 0 1 2 1 3 3 10 2 4 37 11 16 0 0 FFQ 169 0 0 0 0 0 0 0 0 0 0 0 0 6 6 3 1 1 0 0 0 0 0 0 0 0 4 3 0 1 0 2 3 3 4 3 0 2 35 9 14 0 0 FFQ 170 0 0 0 0 0 0 0 0 0 0 0 0 2 6 1 0 0 0 0 0 0 0 0 0 0 5 5 0 0 2 1 2 2 6 5 3 3 39 8 10 0 0 FFQ 171 0 0 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 3 3 2 5 8 5 7 36 10 11 0 0 FFQ 172 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 1 0 0 0 0 0 0 0 0 0 0 3 1 0 0 3 0 3 4 5 6 4 32 15 12 0 0 FFQ 173 0 0 0 0 0 0 0 0 0 0 0 0 4 1 1 0 0 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 6 4 4 5 4 37 18 11 0 0 FFQ 174 0 0 0 0 0 0 0 0 0 0 0 0 4 2 1 1 0 0 0 0 0 0 0 0 1 1 2 1 0 0 0 3 3 4 7 3 5 36 12 14 0 0 FFQ 175 0 0 0 0 0 0 0 0 0 0 0 0 4 2 0 2 0 0 0 0 0 0 0 0 0 2 2 1 0 0 3 3 6 3 10 3 4 30 13 12 0 0 FFQ 176 0 0 0 0 0 0 0 0 0 0 0 0 3 1 1 5 0 0 0 0 0 0 0 0 0 1 4 1 1 3 2 1 2 3 4 3 2 42 7 14 0 0 FFQ 177 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 4 0 0 0 0 0 0 0 0 1 2 2 0 0 1 2 1 1 5 5 7 3 33 11 14 0 0 FFQ 178 0 0 0 0 0 0 0 0 0 0 0 0 1 3 1 3 0 0 0 0 0 0 0 0 1 3 1 0 0 0 0 0 3 6 9 2 8 39 10 10 0 0 FFQ 179 0 0 0 0 0 0 0 0 0 0 0 0 2 4 2 3 0 0 0 0 0 0 0 0 1 1 2 0 0 0 1 1 1 7 8 2 6 36 10 13 0 0 FFQ 180 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 3 0 0 0 0 0 0 0 0 3 1 1 0 0 0 3 0 4 3 4 2 8 41 13 6 0 0 FFQ 181 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 2 0 0 0 0 0 0 0 0 1 1 2 0 0 0 2 1 6 10 5 5 4 39 10 8 0 0 FFQ 182 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 0 0 0 0 0 0 5 1 2 0 0 0 2 1 2 5 4 2 3 46 19 3 0 0 FFQ 183 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 3 0 0 0 0 0 0 0 0 1 0 0 1 0 2 1 0 1 8 6 4 7 43 14 4 0 0 FFQ 184 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 4 0 0 0 0 0 0 0 0 2 1 1 0 1 0 0 3 3 4 6 3 5 55 8 2 0 0 FFQ 185 0 0 0 0 0 0 0 0 0 0 0 0 3 2 1 3 0 0 0 0 0 0 0 0 0 1 2 0 1 1 1 1 2 7 2 4 8 47 9 5 0 0 FFQ 186 0 0 0 0 0 0 0 0 0 0 0 0 1 1 4 6 0 0 0 0 0 0 0 0 2 0 5 0 0 0 1 1 3 11 5 5 4 37 11 3 0 0 FFQ 187 0 0 0 0 0 0 0 0 0 0 0 0 4 1 3 3 0 0 0 0 0 0 0 0 5 1 1 0 2 0 1 1 6 10 3 2 3 41 10 3 0 0 FFQ 188 0 0 0 0 0 0 0 0 0 0 0 0 0 5 1 3 0 0 0 0 0 0 0 0 2 4 7 0 1 0 3 2 7 7 6 3 4 34 9 2 0 0 FFQ 189 0 0 0 0 0 0 0 0 0 0 0 0 3 4 3 4 0 0 0 0 0 0 0 0 4 0 5 2 0 0 5 0 6 8 3 8 8 30 6 1 0 0 FFQ 190 0 0 0 0 0 0 0 0 0 0 0 0 5 5 3 6 0 0 0 0 0 0 0 0 2 1 3 0 1 0 2 2 7 11 1 8 3 34 6 0 0 0 FFQ 191 0 0 0 0 0 0 0 0 0 0 0 0 5 7 2 4 0 0 0 0 0 0 0 0 3 0 3 0 0 0 1 0 4 5 9 6 12 33 6 0 0 0 FFQ 192 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 6 0 0 0 0 0 0 0 0 3 3 6 0 1 0 0 1 5 9 4 4 5 38 7 0 0 0 FFQ 193 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 7 0 0 0 0 0 0 0 0 4 3 3 0 0 0 0 0 5 10 4 2 11 43 4 0 0 0 FFQ 194 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 6 0 0 0 0 0 0 0 0 5 1 8 0 1 0 1 0 4 8 2 7 3 43 8 0 0 0 FFQ 195 0 0 0 0 0 0 0 0 0 0 0 0 4 1 2 8 0 0 0 0 0 0 0 0 0 0 4 0 1 0 3 0 2 13 1 4 8 39 10 0 0 0 FFQ 196 0 0 0 0 0 0 0 0 0 0 0 0 1 6 1 3 0 0 0 0 0 0 0 0 1 1 3 0 2 0 1 1 4 11 2 1 9 43 10 0 0 0 FFQ 197 0 0 0 0 0 0 0 0 0 0 0 0 2 0 2 10 0 0 0 0 0 0 0 0 3 0 1 0 0 0 2 1 6 10 2 0 4 47 10 0 0 0 FFQ 198 0 0 0 0 0 0 0 0 0 0 0 0 2 4 4 7 0 0 0 0 0 0 0 0 1 0 5 1 2 1 0 0 1 7 4 2 4 47 8 0 0 0 FFQ 199 0 0 0 0 0 0 0 0 0 0 0 0 1 4 5 6 0 0 0 0 0 0 0 0 3 2 7 0 0 0 1 0 3 7 3 3 7 39 9 0 0 0 FFQ 200 0 0 0 0 0 0 0 0 0 0 0 0 0 5 2 8 0 0 0 0 0 0 0 0 5 1 1 0 1 0 2 0 5 12 5 5 3 40 5 0 0 0 FFQ 201 0 0 0 0 0 0 0 0 0 0 0 0 2 1 6 7 0 0 0 0 0 0 0 0 5 0 4 0 0 0 1 1 7 8 1 0 4 47 6 0 0 0 FFQ 202 0 0 0 0 0 0 0 0 0 0 0 0 6 7 3 8 0 0 0 0 0 0 0 0 3 3 1 0 0 0 1 0 4 12 2 3 2 34 11 0 0 0 FFQ 203 0 0 0 0 0 0 0 0 0 0 0 0 8 5 2 5 0 0 0 0 0 0 0 0 2 0 4 0 1 0 1 1 4 9 7 2 2 37 10 0 0 0 FFQ 204 0 0 0 0 0 0 0 0 0 0 0 0 2 5 1 6 0 0 0 0 0 0 0 0 4 3 5 0 0 0 0 0 5 11 3 3 5 41 6 0 0 0 FFQ 205 0 0 0 0 0 0 0 0 0 0 0 0 5 11 1 5 0 0 0 0 0 0 0 0 3 0 3 0 0 0 2 0 4 18 2 4 4 33 5 0 0 0 FFQ 206 0 0 0 0 0 0 0 0 0 0 0 0 3 7 2 5 0 0 0 0 0 0 0 0 4 5 7 0 0 0 0 0 2 13 0 3 4 37 8 0 0 0 FFQ 207 0 0 0 0 0 0 0 0 0 0 0 0 1 6 5 6 0 0 0 0 0 0 0 0 4 2 4 0 2 0 4 1 3 10 4 2 3 36 7 0 0 0 FFQ 208 0 0 0 0 0 0 0 0 0 0 0 0 1 4 3 4 0 0 0 0 0 0 0 0 6 4 4 0 0 0 1 0 9 11 2 5 3 36 7 0 0 0 FFQ 209 0 0 0 0 0 0 0 0 0 0 0 0 2 7 4 8 0 0 0 0 0 0 0 0 3 2 4 0 0 0 3 0 8 14 2 1 2 33 7 0 0 0 FFQ 210 0 0 0 0 0 0 0 0 0 0 0 0 1 5 6 7 0 0 0 0 0 0 0 0 4 3 3 0 0 0 3 0 6 6 0 3 5 43 5 0 0 0 FFQ 211 0 0 0 0 0 0 0 0 0 0 0 0 2 5 6 4 0 0 0 0 0 0 0 0 6 3 5 0 0 0 0 2 5 11 4 3 3 35 6 0 0 0 FFQ 212 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 7 0 0 0 0 0 0 0 0 3 4 8 0 0 0 0 0 5 17 1 1 4 35 6 0 0 0 FFQ 213 0 0 0 0 0 0 0 0 0 0 0 0 6 6 10 5 0 0 0 0 0 0 0 0 5 3 1 0 0 0 0 1 4 7 1 5 2 43 1 0 0 0 FFQ 214 0 0 0 0 0 0 0 0 0 0 0 0 4 9 4 10 0 0 0 0 0 0 0 0 4 1 6 0 2 0 1 1 3 9 0 2 3 39 2 0 0 0 FFQ 215 0 0 0 0 0 0 0 0 0 0 0 0 5 6 5 6 0 0 0 0 0 0 0 0 5 5 8 0 0 0 1 2 5 12 0 0 4 34 2 0 0 0 FFQ 216 0 0 0 0 0 0 0 0 0 0 0 0 3 3 6 5 0 0 0 0 0 0 0 0 3 6 5 1 3 0 1 0 5 15 1 3 2 37 1 0 0 0 FFQ 217 0 0 0 0 0 0 0 0 0 0 0 0 3 7 6 4 0 0 0 0 0 0 0 0 4 1 2 0 0 1 1 0 10 15 1 3 2 39 1 0 0 0 FFQ 218 0 0 0 0 0 0 0 0 0 0 0 0 2 4 7 2 0 0 0 0 0 0 0 0 6 4 10 0 0 0 1 0 3 13 1 5 3 35 4 0 0 0 FFQ 219 0 0 0 0 0 0 0 0 0 0 0 0 2 5 4 4 0 0 0 0 0 0 0 0 5 1 5 0 0 1 0 0 4 13 1 6 3 45 1 0 0 0 FFQ 220 0 0 0 0 0 0 0 0 0 0 0 0 2 4 9 4 0 0 0 0 0 0 0 0 4 2 2 0 0 0 0 2 5 14 1 1 2 47 1 0 0 0 FFQ 221 0 0 0 0 0 0 0 0 0 0 0 0 3 4 6 4 0 0 0 0 0 0 0 0 1 4 6 0 0 0 0 0 2 10 1 3 3 53 0 0 0 0 FFQ 222 0 0 0 0 0 0 0 0 0 0 0 0 3 5 8 6 0 0 0 0 0 0 0 0 5 2 6 0 0 0 0 0 2 6 1 3 4 49 0 0 0 0 FFQ 223 0 0 0 0 0 0 0 0 0 0 0 0 5 8 6 8 0 0 0 0 0 0 0 0 3 3 5 1 1 0 1 0 0 13 1 0 2 43 0 0 0 0 FFQ 224 0 0 0 0 0 0 0 0 0 0 0 0 2 9 11 6 0 0 0 0 0 0 0 0 4 3 3 0 0 0 0 1 2 15 1 0 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7 0 0 0 0 0 0 0 0 5 1 4 0 0 0 2 1 5 7 0 0 4 37 0 0 0 0 FFQ 236 0 0 0 0 0 0 0 0 0 0 0 0 7 8 15 6 0 0 0 0 0 0 0 0 7 3 5 1 0 0 0 1 6 8 0 1 1 31 0 0 0 0 FFQ 237 0 0 0 0 0 0 0 0 0 0 0 0 2 9 13 6 0 0 0 0 0 0 0 0 6 4 7 1 0 0 0 1 3 12 0 1 1 34 0 0 0 0 FFQ 238 0 0 0 0 0 0 0 0 0 0 0 0 2 10 16 6 0 0 0 0 0 0 0 0 9 2 3 0 0 0 0 0 5 9 0 2 3 33 0 0 0 0 FFQ 239 0 0 0 0 0 0 0 0 0 0 0 0 4 5 17 9 0 0 0 0 0 0 0 0 7 3 1 0 0 0 1 1 2 15 0 1 3 31 0 0 0 0 FFQ 240 0 0 0 0 0 0 0 0 0 0 0 0 0 10 19 6 0 0 0 0 0 0 0 0 6 4 4 0 0 1 3 0 2 13 0 1 1 30 0 0 0 0 FFQ 241 0 0 0 0 0 0 0 0 0 0 0 0 1 4 23 9 0 0 0 0 0 0 0 0 7 5 8 1 0 0 2 1 1 8 0 1 3 26 0 0 0 0 FFQ 242 0 0 0 0 0 0 0 0 0 0 0 0 3 10 19 10 0 0 0 0 0 0 0 0 2 5 4 1 0 0 0 1 2 10 0 0 2 31 0 0 0 0 FFQ 243 0 0 0 0 0 0 0 0 0 0 0 0 2 2 17 14 0 0 0 0 0 0 0 0 6 5 5 0 0 0 0 0 6 13 0 2 3 25 0 0 0 0 FFQ 244 0 0 0 0 0 0 0 0 0 0 0 0 1 3 18 11 0 0 0 0 0 0 0 0 6 5 5 1 0 0 1 0 2 12 0 5 1 29 0 0 0 0 FFQ 245 0 0 0 0 0 0 0 0 0 0 0 0 1 8 14 11 0 0 0 0 0 0 0 0 8 5 3 1 0 0 1 0 1 15 1 1 3 27 0 0 0 0 FFQ 246 0 0 0 0 0 0 0 0 0 0 0 0 4 6 15 12 0 0 0 0 0 0 0 0 5 2 8 1 0 1 1 0 1 13 0 2 1 28 0 0 0 0 FFQ 247 0 0 0 0 0 0 0 0 0 0 0 0 8 3 16 14 0 0 0 0 0 0 0 0 10 4 6 0 0 0 0 0 2 15 1 2 2 17 0 0 0 0 FFQ 248 0 0 0 0 0 0 0 0 0 0 0 0 5 6 21 8 0 0 0 0 0 0 0 0 7 8 6 2 0 0 0 1 1 14 0 2 2 17 0 0 0 0 FFQ 249 0 0 0 0 0 0 0 0 0 0 0 0 5 6 20 8 0 0 0 0 0 0 0 0 5 7 10 0 1 0 0 0 1 15 0 2 0 20 0 0 0 0 FFQ 250 0 0 0 0 0 0 0 0 0 0 0 0 2 10 15 10 0 0 0 0 0 0 0 0 9 5 8 1 0 0 0 2 6 10 0 0 2 20 0 0 0 0 FFQ 251 0 0 0 0 0 0 0 0 0 0 0 0 7 20 21 17 0 0 0 0 0 0 0 0 7 7 6 0 0 0 0 1 2 4 0 0 0 8 0 0 0 0 # Last Fragment Qualities. Use `grep ^LFQ | cut -f 2-` to extract this part. # Columns correspond to qualities and rows to cycles. First column is the cycle number. LFQ 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 3 2 0 20 38 32 1 0 0 0 0 0 0 LFQ 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 3 0 0 18 36 36 6 0 0 0 0 0 0 LFQ 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 14 31 46 5 0 0 0 0 0 0 LFQ 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 8 36 42 11 0 0 0 0 0 0 LFQ 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 12 35 43 6 0 0 0 0 0 0 LFQ 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 7 8 0 0 81 0 0 0 0 LFQ 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 13 1 0 76 0 0 0 0 LFQ 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 11 15 4 0 69 0 0 0 0 LFQ 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 6 20 3 0 68 0 0 0 0 LFQ 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 11 5 0 75 0 0 0 0 LFQ 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 6 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Use `grep ^MPC | cut -f 2-` to extract this part. # Columns correspond to qualities, rows to cycles. 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0 0 0 0 MPC 186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 190 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 192 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 230 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 MPC 233 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 MPC 234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 MPC 235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 MPC 237 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 MPC 238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 MPC 240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 MPC 243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 MPC 247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 MPC 248 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 3 2 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 2 0 0 0 3 0 0 0 MPC 249 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2 0 5 0 0 0 0 0 0 2 0 0 0 0 0 0 0 MPC 250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 2 0 0 0 2 0 0 0 MPC 251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 2 2 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 3 0 0 0 MPC 252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 # GC Content of first fragments. Use `grep ^GCF | cut -f 2-` to extract this part. GCF 21.86 0 GCF 44.22 2 GCF 44.97 8 GCF 45.48 4 GCF 45.98 3 GCF 46.48 5 GCF 46.98 2 GCF 47.49 3 GCF 47.99 12 GCF 48.49 13 GCF 48.99 9 GCF 49.50 2 GCF 50.25 3 GCF 51.01 6 GCF 51.51 4 GCF 52.01 1 GCF 52.51 0 GCF 53.02 1 # GC Content of last fragments. Use `grep ^GCL | cut -f 2-` to extract this part. GCL 21.86 0 GCL 44.22 2 GCL 44.97 8 GCL 45.48 4 GCL 45.98 3 GCL 46.48 5 GCL 46.98 2 GCL 47.49 3 GCL 47.99 12 GCL 48.49 13 GCL 48.99 9 GCL 49.50 2 GCL 50.25 3 GCL 51.01 6 GCL 51.51 4 GCL 52.01 1 GCL 52.51 0 GCL 53.02 1 # ACGT content per cycle. Use `grep ^GCC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%] GCC 1 21.94 30.10 34.18 13.78 2.04 0.00 GCC 2 30.00 16.00 11.00 43.00 0.00 0.00 GCC 3 33.00 25.00 9.00 33.00 0.00 0.00 GCC 4 17.00 29.00 13.00 41.00 0.00 0.00 GCC 5 37.00 22.00 12.00 29.00 0.00 0.00 GCC 6 36.00 26.00 17.00 21.00 0.00 0.00 GCC 7 29.50 13.50 31.50 25.50 0.00 0.00 GCC 8 50.50 14.50 19.50 15.50 0.00 0.00 GCC 9 17.00 33.00 18.00 32.00 0.00 0.00 GCC 10 37.00 14.00 21.00 28.00 0.00 0.00 GCC 11 20.50 14.50 29.50 35.50 0.00 0.00 GCC 12 30.00 24.00 22.00 24.00 0.00 0.00 GCC 13 27.00 15.00 21.00 37.00 0.00 0.00 GCC 14 24.24 22.22 26.26 27.27 1.01 0.00 GCC 15 25.50 20.50 24.50 29.50 0.00 0.00 GCC 16 31.00 15.00 20.00 34.00 0.00 0.00 GCC 17 28.00 25.00 14.00 33.00 0.00 0.00 GCC 18 30.50 28.50 19.50 21.50 0.00 0.00 GCC 19 29.00 26.00 21.00 24.00 0.00 0.00 GCC 20 22.50 23.50 17.50 36.50 0.00 0.00 GCC 21 35.50 17.50 19.50 27.50 0.00 0.00 GCC 22 37.50 28.50 15.50 18.50 0.00 0.00 GCC 23 31.31 19.19 13.13 36.36 1.01 0.00 GCC 24 37.00 12.00 22.00 29.00 0.00 0.00 GCC 25 35.50 22.50 17.50 24.50 0.00 0.00 GCC 26 33.50 18.50 15.50 32.50 0.00 0.00 GCC 27 34.50 14.50 25.50 25.50 0.00 0.00 GCC 28 31.00 14.00 24.00 31.00 0.00 0.00 GCC 29 30.00 27.00 24.00 19.00 0.00 0.00 GCC 30 31.00 20.00 14.00 35.00 0.00 0.00 GCC 31 33.50 29.50 13.50 23.50 0.00 0.00 GCC 32 42.50 20.50 19.50 17.50 0.00 0.00 GCC 33 25.50 23.50 14.50 36.50 0.00 0.00 GCC 34 39.50 16.50 20.50 23.50 0.00 0.00 GCC 35 32.50 23.50 21.50 22.50 0.00 0.00 GCC 36 42.00 25.00 16.00 17.00 0.00 0.00 GCC 37 38.00 17.00 19.00 26.00 0.00 0.00 GCC 38 24.00 26.00 25.00 25.00 0.00 0.00 GCC 39 22.50 41.50 18.50 17.50 0.00 0.00 GCC 40 32.00 16.00 21.00 31.00 0.00 0.00 GCC 41 33.00 28.00 19.00 20.00 0.00 0.00 GCC 42 30.50 25.50 19.50 24.50 0.00 0.00 GCC 43 35.00 29.00 15.00 21.00 0.00 0.00 GCC 44 20.00 27.00 22.00 31.00 0.00 0.00 GCC 45 40.50 21.50 21.50 16.50 0.00 0.00 GCC 46 26.50 20.50 22.50 30.50 0.00 0.00 GCC 47 38.50 29.50 16.50 15.50 0.00 0.00 GCC 48 27.50 24.50 17.50 30.50 0.00 0.00 GCC 49 28.50 32.50 10.50 28.50 0.00 0.00 GCC 50 46.50 20.50 9.50 23.50 0.00 0.00 GCC 51 34.50 28.50 13.50 23.50 0.00 0.00 GCC 52 41.50 23.50 20.50 14.50 0.00 0.00 GCC 53 20.00 28.00 26.00 26.00 0.00 0.00 GCC 54 31.50 18.50 24.50 25.50 0.00 0.00 GCC 55 30.50 22.50 16.50 30.50 0.00 0.00 GCC 56 33.50 22.50 13.50 30.50 0.00 0.00 GCC 57 23.00 24.00 23.00 30.00 0.00 0.00 GCC 58 25.00 37.00 19.00 19.00 0.00 0.00 GCC 59 34.00 23.00 24.00 19.00 0.00 0.00 GCC 60 29.00 28.00 17.00 26.00 0.00 0.00 GCC 61 25.50 23.50 24.50 26.50 0.00 0.00 GCC 62 31.50 22.50 16.50 29.50 0.00 0.00 GCC 63 27.50 28.50 25.50 18.50 0.00 0.00 GCC 64 33.50 21.50 25.50 19.50 0.00 0.00 GCC 65 35.50 19.50 18.50 26.50 0.00 0.00 GCC 66 34.00 25.00 15.00 26.00 0.00 0.00 GCC 67 37.00 23.00 19.00 21.00 0.00 0.00 GCC 68 36.50 29.50 13.50 20.50 0.00 0.00 GCC 69 38.50 19.50 20.50 21.50 0.00 0.00 GCC 70 38.50 16.50 18.50 26.50 0.00 0.00 GCC 71 25.50 38.50 21.50 14.50 0.00 0.00 GCC 72 29.00 29.00 25.00 17.00 0.00 0.00 GCC 73 32.50 20.50 21.50 25.50 0.00 0.00 GCC 74 28.50 32.50 12.50 26.50 0.00 0.00 GCC 75 41.50 12.50 18.50 27.50 0.00 0.00 GCC 76 24.50 29.50 23.50 22.50 0.00 0.00 GCC 77 36.00 21.00 18.00 25.00 0.00 0.00 GCC 78 27.00 34.00 22.00 17.00 0.00 0.00 GCC 79 21.50 26.50 25.50 26.50 0.00 0.00 GCC 80 34.00 19.00 28.00 19.00 0.00 0.00 GCC 81 17.00 26.00 26.00 31.00 0.00 0.00 GCC 82 31.00 30.00 23.00 16.00 0.00 0.00 GCC 83 31.50 26.50 12.50 29.50 0.00 0.00 GCC 84 19.00 41.00 21.00 19.00 0.00 0.00 GCC 85 37.50 24.50 16.50 21.50 0.00 0.00 GCC 86 15.00 48.00 15.00 22.00 0.00 0.00 GCC 87 41.00 16.00 18.00 25.00 0.00 0.00 GCC 88 23.50 27.50 27.50 21.50 0.00 0.00 GCC 89 26.50 27.50 26.50 19.50 0.00 0.00 GCC 90 18.50 23.50 24.50 33.50 0.00 0.00 GCC 91 27.00 32.00 22.00 19.00 0.00 0.00 GCC 92 23.50 17.50 27.50 31.50 0.00 0.00 GCC 93 25.50 37.50 15.50 21.50 0.00 0.00 GCC 94 27.00 17.00 24.00 32.00 0.00 0.00 GCC 95 26.77 37.88 14.65 20.71 1.01 0.00 GCC 96 29.50 25.50 16.50 28.50 0.00 0.00 GCC 97 29.00 31.00 21.00 19.00 0.00 0.00 GCC 98 18.18 33.33 22.22 26.26 1.01 0.00 GCC 99 24.50 33.50 24.50 17.50 0.00 0.00 GCC 100 24.50 16.50 24.50 34.50 0.00 0.00 GCC 101 25.00 40.00 19.00 16.00 0.00 0.00 GCC 102 17.50 17.50 32.50 32.50 0.00 0.00 GCC 103 31.00 26.00 16.00 27.00 0.00 0.00 GCC 104 26.50 29.50 20.50 23.50 0.00 0.00 GCC 105 34.00 33.00 21.00 12.00 0.00 0.00 GCC 106 23.00 31.00 26.00 20.00 0.00 0.00 GCC 107 17.68 35.86 23.74 22.73 1.01 0.00 GCC 108 24.75 30.81 23.74 20.71 1.01 0.00 GCC 109 17.00 31.00 22.00 30.00 0.00 0.00 GCC 110 16.16 35.35 24.24 24.24 1.01 0.00 GCC 111 24.24 32.32 23.23 20.20 1.01 0.00 GCC 112 37.37 28.28 16.16 18.18 1.01 0.00 GCC 113 19.70 22.73 32.83 24.75 1.01 0.00 GCC 114 17.00 31.00 35.00 17.00 0.00 0.00 GCC 115 29.50 24.50 23.50 22.50 0.00 0.00 GCC 116 22.00 30.00 34.00 14.00 0.00 0.00 GCC 117 27.00 23.00 19.00 31.00 0.00 0.00 GCC 118 25.50 14.50 34.50 25.50 0.00 0.00 GCC 119 22.50 34.50 20.50 22.50 0.00 0.00 GCC 120 17.50 24.50 26.50 31.50 0.00 0.00 GCC 121 27.78 33.84 22.73 15.66 1.01 0.00 GCC 122 17.00 23.00 25.00 35.00 0.00 0.00 GCC 123 23.50 46.50 11.50 18.50 0.00 0.00 GCC 124 9.00 32.00 34.00 25.00 0.00 0.00 GCC 125 24.00 27.00 19.00 30.00 0.00 0.00 GCC 126 26.00 17.00 28.00 29.00 0.00 0.00 GCC 127 26.50 16.50 21.50 35.50 0.00 0.00 GCC 128 18.00 34.00 31.00 17.00 0.00 0.00 GCC 129 25.50 25.50 27.50 21.50 0.00 0.00 GCC 130 25.00 20.00 22.00 33.00 0.00 0.00 GCC 131 17.50 39.50 24.50 18.50 0.00 0.00 GCC 132 21.00 28.00 23.00 28.00 0.00 0.00 GCC 133 13.50 31.50 35.50 19.50 0.00 0.00 GCC 134 24.50 19.50 30.50 25.50 0.00 0.00 GCC 135 16.50 23.50 30.50 29.50 0.00 0.00 GCC 136 28.00 32.00 15.00 25.00 0.00 0.00 GCC 137 22.50 21.50 30.50 25.50 0.00 0.00 GCC 138 14.50 34.50 24.50 26.50 0.00 0.00 GCC 139 20.50 29.50 24.50 25.50 0.00 0.00 GCC 140 17.00 23.00 30.00 30.00 0.00 0.00 GCC 141 20.50 23.50 25.50 30.50 0.00 0.00 GCC 142 18.00 29.00 38.00 15.00 0.00 0.00 GCC 143 22.00 24.00 27.00 27.00 0.00 0.00 GCC 144 21.50 30.50 26.50 21.50 0.00 0.00 GCC 145 22.00 21.00 29.00 28.00 0.00 0.00 GCC 146 25.00 16.00 39.00 20.00 0.00 0.00 GCC 147 26.50 22.50 30.50 20.50 0.00 0.00 GCC 148 12.50 28.50 36.50 22.50 0.00 0.00 GCC 149 26.50 23.50 23.50 26.50 0.00 0.00 GCC 150 14.00 29.00 24.00 33.00 0.00 0.00 GCC 151 19.50 30.50 32.50 17.50 0.00 0.00 GCC 152 18.50 17.50 29.50 34.50 0.00 0.00 GCC 153 22.50 22.50 31.50 23.50 0.00 0.00 GCC 154 22.00 21.00 29.00 28.00 0.00 0.00 GCC 155 21.00 26.00 19.00 34.00 0.00 0.00 GCC 156 14.50 23.50 35.50 26.50 0.00 0.00 GCC 157 22.00 31.00 23.00 24.00 0.00 0.00 GCC 158 22.50 29.50 24.50 23.50 0.00 0.00 GCC 159 17.50 12.50 46.50 23.50 0.00 0.00 GCC 160 24.50 26.50 26.50 22.50 0.00 0.00 GCC 161 13.00 23.00 45.00 19.00 0.00 0.00 GCC 162 31.50 16.50 22.50 29.50 0.00 0.00 GCC 163 19.50 21.50 35.50 23.50 0.00 0.00 GCC 164 29.00 18.00 21.00 32.00 0.00 0.00 GCC 165 14.50 17.50 35.50 32.50 0.00 0.00 GCC 166 17.50 37.50 28.50 16.50 0.00 0.00 GCC 167 16.50 21.50 31.50 30.50 0.00 0.00 GCC 168 14.00 25.00 30.00 31.00 0.00 0.00 GCC 169 18.50 20.50 23.50 37.50 0.00 0.00 GCC 170 19.00 23.00 28.00 30.00 0.00 0.00 GCC 171 20.00 28.00 33.00 19.00 0.00 0.00 GCC 172 19.00 20.00 32.00 29.00 0.00 0.00 GCC 173 24.50 16.50 33.50 25.50 0.00 0.00 GCC 174 17.50 23.50 33.50 25.50 0.00 0.00 GCC 175 33.50 17.50 35.50 13.50 0.00 0.00 GCC 176 16.50 32.50 28.50 22.50 0.00 0.00 GCC 177 19.00 22.00 27.00 32.00 0.00 0.00 GCC 178 16.00 26.00 30.00 28.00 0.00 0.00 GCC 179 18.00 18.00 22.00 42.00 0.00 0.00 GCC 180 21.00 22.00 34.00 23.00 0.00 0.00 GCC 181 20.50 19.50 35.50 24.50 0.00 0.00 GCC 182 32.50 18.50 22.50 26.50 0.00 0.00 GCC 183 24.50 13.50 28.50 33.50 0.00 0.00 GCC 184 15.00 29.00 30.00 26.00 0.00 0.00 GCC 185 15.00 32.00 33.00 20.00 0.00 0.00 GCC 186 22.50 23.50 34.50 19.50 0.00 0.00 GCC 187 19.00 14.00 40.00 27.00 0.00 0.00 GCC 188 27.50 21.50 27.50 23.50 0.00 0.00 GCC 189 17.00 22.00 34.00 27.00 0.00 0.00 GCC 190 23.00 30.00 23.00 24.00 0.00 0.00 GCC 191 25.00 22.00 28.00 25.00 0.00 0.00 GCC 192 34.50 24.50 13.50 27.50 0.00 0.00 GCC 193 18.50 25.50 25.50 30.50 0.00 0.00 GCC 194 18.50 33.50 24.50 23.50 0.00 0.00 GCC 195 16.00 26.00 23.00 35.00 0.00 0.00 GCC 196 21.50 25.50 24.50 28.50 0.00 0.00 GCC 197 20.00 21.00 23.00 36.00 0.00 0.00 GCC 198 17.00 21.00 37.00 25.00 0.00 0.00 GCC 199 20.50 18.50 25.50 35.50 0.00 0.00 GCC 200 21.00 29.00 21.00 29.00 0.00 0.00 GCC 201 27.00 21.00 23.00 29.00 0.00 0.00 GCC 202 21.50 24.50 19.50 34.50 0.00 0.00 GCC 203 21.50 24.50 26.50 27.50 0.00 0.00 GCC 204 27.00 29.00 24.00 20.00 0.00 0.00 GCC 205 19.50 21.50 22.50 36.50 0.00 0.00 GCC 206 26.50 24.50 21.50 27.50 0.00 0.00 GCC 207 22.50 21.50 19.50 36.50 0.00 0.00 GCC 208 14.00 35.00 29.00 22.00 0.00 0.00 GCC 209 16.00 23.00 12.00 49.00 0.00 0.00 GCC 210 18.50 19.50 40.50 21.50 0.00 0.00 GCC 211 26.00 20.00 22.00 32.00 0.00 0.00 GCC 212 21.00 31.00 18.00 30.00 0.00 0.00 GCC 213 24.00 15.00 31.00 30.00 0.00 0.00 GCC 214 17.50 24.50 25.50 32.50 0.00 0.00 GCC 215 26.00 24.00 23.00 27.00 0.00 0.00 GCC 216 21.50 17.50 25.50 35.50 0.00 0.00 GCC 217 26.00 29.00 17.00 28.00 0.00 0.00 GCC 218 20.00 27.00 21.00 32.00 0.00 0.00 GCC 219 17.00 21.00 21.00 41.00 0.00 0.00 GCC 220 25.50 23.50 23.50 27.50 0.00 0.00 GCC 221 21.50 23.50 20.50 34.50 0.00 0.00 GCC 222 21.50 21.50 18.50 38.50 0.00 0.00 GCC 223 20.00 27.00 28.00 25.00 0.00 0.00 GCC 224 22.50 22.50 24.50 30.50 0.00 0.00 GCC 225 14.50 35.50 30.50 19.50 0.00 0.00 GCC 226 20.00 23.00 26.00 31.00 0.00 0.00 GCC 227 20.50 24.50 23.50 31.50 0.00 0.00 GCC 228 33.00 19.00 26.00 22.00 0.00 0.00 GCC 229 22.50 24.50 18.50 34.50 0.00 0.00 GCC 230 21.00 32.00 16.00 31.00 0.00 0.00 GCC 231 23.00 28.00 30.00 19.00 0.00 0.00 GCC 232 23.50 21.50 12.50 42.50 0.00 0.00 GCC 233 21.00 27.00 25.00 27.00 0.00 0.00 GCC 234 16.50 27.50 22.50 33.50 0.00 0.00 GCC 235 20.00 15.00 28.00 37.00 0.00 0.00 GCC 236 28.00 23.00 21.00 28.00 0.00 0.00 GCC 237 20.50 19.50 22.50 37.50 0.00 0.00 GCC 238 21.50 29.50 24.50 24.50 0.00 0.00 GCC 239 20.00 8.00 17.00 55.00 0.00 0.00 GCC 240 28.00 24.00 16.00 32.00 0.00 0.00 GCC 241 22.50 22.50 16.50 38.50 0.00 0.00 GCC 242 29.00 25.00 13.00 33.00 0.00 0.00 GCC 243 22.50 15.50 23.50 38.50 0.00 0.00 GCC 244 20.50 23.50 16.50 39.50 0.00 0.00 GCC 245 28.00 23.00 19.00 30.00 0.00 0.00 GCC 246 21.00 29.00 25.00 25.00 0.00 0.00 GCC 247 32.00 14.00 13.00 41.00 0.00 0.00 GCC 248 18.00 18.00 25.00 39.00 0.00 0.00 GCC 249 25.00 23.00 21.00 31.00 0.00 0.00 GCC 250 27.50 22.50 17.50 32.50 0.00 0.00 GCC 251 13.50 20.50 36.50 29.50 0.00 0.00 # ACGT content per cycle, read oriented. Use `grep ^GCT | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%] GCT 1 22.45 32.65 31.63 13.27 GCT 2 26.00 17.00 10.00 47.00 GCT 3 34.00 25.00 9.00 32.00 GCT 4 13.00 32.00 10.00 45.00 GCT 5 37.00 24.00 10.00 29.00 GCT 6 44.00 26.00 17.00 13.00 GCT 7 28.00 13.00 32.00 27.00 GCT 8 49.00 16.00 18.00 17.00 GCT 9 19.00 35.00 16.00 30.00 GCT 10 35.00 13.00 22.00 30.00 GCT 11 18.00 15.00 29.00 38.00 GCT 12 28.00 24.00 22.00 26.00 GCT 13 29.00 17.00 19.00 35.00 GCT 14 21.21 24.24 24.24 30.30 GCT 15 23.00 20.00 25.00 32.00 GCT 16 35.00 15.00 20.00 30.00 GCT 17 29.00 26.00 13.00 32.00 GCT 18 31.00 30.00 18.00 21.00 GCT 19 30.00 26.00 21.00 23.00 GCT 20 23.00 21.00 20.00 36.00 GCT 21 36.00 18.00 19.00 27.00 GCT 22 39.00 31.00 13.00 17.00 GCT 23 30.30 21.21 11.11 37.37 GCT 24 36.00 14.00 20.00 30.00 GCT 25 38.00 23.00 17.00 22.00 GCT 26 36.00 21.00 13.00 30.00 GCT 27 32.00 18.00 22.00 28.00 GCT 28 30.00 13.00 25.00 32.00 GCT 29 30.00 28.00 23.00 19.00 GCT 30 34.00 21.00 13.00 32.00 GCT 31 33.00 29.00 14.00 24.00 GCT 32 38.00 20.00 20.00 22.00 GCT 33 27.00 23.00 15.00 35.00 GCT 34 43.00 17.00 20.00 20.00 GCT 35 35.00 23.00 22.00 20.00 GCT 36 41.00 25.00 16.00 18.00 GCT 37 38.00 18.00 18.00 26.00 GCT 38 23.00 26.00 25.00 26.00 GCT 39 22.00 41.00 19.00 18.00 GCT 40 29.00 14.00 23.00 34.00 GCT 41 29.00 27.00 20.00 24.00 GCT 42 29.00 27.00 18.00 26.00 GCT 43 38.00 28.00 16.00 18.00 GCT 44 21.00 26.00 23.00 30.00 GCT 45 38.00 25.00 18.00 19.00 GCT 46 27.00 21.00 22.00 30.00 GCT 47 40.00 28.00 18.00 14.00 GCT 48 25.00 22.00 20.00 33.00 GCT 49 26.00 33.00 10.00 31.00 GCT 50 49.00 20.00 10.00 21.00 GCT 51 29.00 29.00 13.00 29.00 GCT 52 43.00 22.00 22.00 13.00 GCT 53 19.00 27.00 27.00 27.00 GCT 54 25.00 18.00 25.00 32.00 GCT 55 32.00 22.00 17.00 29.00 GCT 56 36.00 20.00 16.00 28.00 GCT 57 28.00 24.00 23.00 25.00 GCT 58 23.00 39.00 17.00 21.00 GCT 59 33.00 21.00 26.00 20.00 GCT 60 30.00 26.00 19.00 25.00 GCT 61 23.00 23.00 25.00 29.00 GCT 62 35.00 19.00 20.00 26.00 GCT 63 26.00 25.00 29.00 20.00 GCT 64 30.00 20.00 27.00 23.00 GCT 65 38.00 17.00 21.00 24.00 GCT 66 33.00 26.00 14.00 27.00 GCT 67 35.00 21.00 21.00 23.00 GCT 68 39.00 28.00 15.00 18.00 GCT 69 38.00 18.00 22.00 22.00 GCT 70 40.00 13.00 22.00 25.00 GCT 71 29.00 41.00 19.00 11.00 GCT 72 33.00 26.00 28.00 13.00 GCT 73 31.00 18.00 24.00 27.00 GCT 74 31.00 32.00 13.00 24.00 GCT 75 46.00 10.00 21.00 23.00 GCT 76 23.00 28.00 25.00 24.00 GCT 77 35.00 20.00 19.00 26.00 GCT 78 29.00 30.00 26.00 15.00 GCT 79 24.00 25.00 27.00 24.00 GCT 80 40.00 18.00 29.00 13.00 GCT 81 18.00 26.00 26.00 30.00 GCT 82 30.00 25.00 28.00 17.00 GCT 83 36.00 25.00 14.00 25.00 GCT 84 22.00 39.00 23.00 16.00 GCT 85 42.00 20.00 21.00 17.00 GCT 86 12.00 47.00 16.00 25.00 GCT 87 45.00 15.00 19.00 21.00 GCT 88 26.00 24.00 31.00 19.00 GCT 89 26.00 25.00 29.00 20.00 GCT 90 24.00 22.00 26.00 28.00 GCT 91 29.00 30.00 24.00 17.00 GCT 92 22.00 13.00 32.00 33.00 GCT 93 29.00 40.00 13.00 18.00 GCT 94 30.00 16.00 25.00 29.00 GCT 95 31.31 35.35 17.17 16.16 GCT 96 34.00 27.00 15.00 24.00 GCT 97 32.00 27.00 25.00 16.00 GCT 98 21.21 31.31 24.24 23.23 GCT 99 27.00 37.00 21.00 15.00 GCT 100 29.00 15.00 26.00 30.00 GCT 101 27.00 34.00 25.00 14.00 GCT 102 20.00 14.00 36.00 30.00 GCT 103 32.00 26.00 16.00 26.00 GCT 104 30.00 28.00 22.00 20.00 GCT 105 35.00 35.00 19.00 11.00 GCT 106 22.00 32.00 25.00 21.00 GCT 107 19.19 33.33 26.26 21.21 GCT 108 27.27 33.33 21.21 18.18 GCT 109 19.00 29.00 24.00 28.00 GCT 110 20.20 31.31 28.28 20.20 GCT 111 25.25 33.33 22.22 19.19 GCT 112 39.39 28.28 16.16 16.16 GCT 113 21.21 24.24 31.31 23.23 GCT 114 19.00 31.00 35.00 15.00 GCT 115 32.00 23.00 25.00 20.00 GCT 116 20.00 29.00 35.00 16.00 GCT 117 31.00 21.00 21.00 27.00 GCT 118 25.00 14.00 35.00 26.00 GCT 119 21.00 31.00 24.00 24.00 GCT 120 19.00 24.00 27.00 30.00 GCT 121 24.24 36.36 20.20 19.19 GCT 122 18.00 25.00 23.00 34.00 GCT 123 25.00 48.00 10.00 17.00 GCT 124 10.00 31.00 35.00 24.00 GCT 125 27.00 24.00 22.00 27.00 GCT 126 24.00 19.00 26.00 31.00 GCT 127 26.00 16.00 22.00 36.00 GCT 128 16.00 35.00 30.00 19.00 GCT 129 24.00 27.00 26.00 23.00 GCT 130 25.00 19.00 23.00 33.00 GCT 131 17.00 40.00 24.00 19.00 GCT 132 20.00 27.00 24.00 29.00 GCT 133 15.00 34.00 33.00 18.00 GCT 134 22.00 19.00 31.00 28.00 GCT 135 17.00 28.00 26.00 29.00 GCT 136 25.00 33.00 14.00 28.00 GCT 137 21.00 22.00 30.00 27.00 GCT 138 15.00 30.00 29.00 26.00 GCT 139 19.00 32.00 22.00 27.00 GCT 140 19.00 24.00 29.00 28.00 GCT 141 21.00 24.00 25.00 30.00 GCT 142 17.00 32.00 35.00 16.00 GCT 143 23.00 23.00 28.00 26.00 GCT 144 20.00 33.00 24.00 23.00 GCT 145 20.00 26.00 24.00 30.00 GCT 146 26.00 15.00 40.00 19.00 GCT 147 23.00 23.00 30.00 24.00 GCT 148 12.00 32.00 33.00 23.00 GCT 149 27.00 24.00 23.00 26.00 GCT 150 12.00 32.00 21.00 35.00 GCT 151 22.00 29.00 34.00 15.00 GCT 152 16.00 21.00 26.00 37.00 GCT 153 24.00 20.00 34.00 22.00 GCT 154 25.00 22.00 28.00 25.00 GCT 155 21.00 28.00 17.00 34.00 GCT 156 16.00 23.00 36.00 25.00 GCT 157 23.00 34.00 20.00 23.00 GCT 158 21.00 33.00 21.00 25.00 GCT 159 19.00 15.00 44.00 22.00 GCT 160 24.00 31.00 22.00 23.00 GCT 161 13.00 28.00 40.00 19.00 GCT 162 33.00 19.00 20.00 28.00 GCT 163 23.00 26.00 31.00 20.00 GCT 164 33.00 19.00 20.00 28.00 GCT 165 13.00 16.00 37.00 34.00 GCT 166 20.00 36.00 30.00 14.00 GCT 167 17.00 28.00 25.00 30.00 GCT 168 16.00 24.00 31.00 29.00 GCT 169 21.00 23.00 21.00 35.00 GCT 170 22.00 24.00 27.00 27.00 GCT 171 23.00 30.00 31.00 16.00 GCT 172 24.00 22.00 30.00 24.00 GCT 173 24.00 17.00 33.00 26.00 GCT 174 21.00 24.00 33.00 22.00 GCT 175 34.00 19.00 34.00 13.00 GCT 176 17.00 37.00 24.00 22.00 GCT 177 24.00 24.00 25.00 27.00 GCT 178 19.00 26.00 30.00 25.00 GCT 179 24.00 20.00 20.00 36.00 GCT 180 22.00 25.00 31.00 22.00 GCT 181 21.00 17.00 38.00 24.00 GCT 182 35.00 21.00 20.00 24.00 GCT 183 28.00 15.00 27.00 30.00 GCT 184 17.00 30.00 29.00 24.00 GCT 185 16.00 32.00 33.00 19.00 GCT 186 21.00 22.00 36.00 21.00 GCT 187 24.00 13.00 41.00 22.00 GCT 188 29.00 19.00 30.00 22.00 GCT 189 19.00 23.00 33.00 25.00 GCT 190 24.00 28.00 25.00 23.00 GCT 191 28.00 21.00 29.00 22.00 GCT 192 37.00 25.00 13.00 25.00 GCT 193 18.00 26.00 25.00 31.00 GCT 194 21.00 34.00 24.00 21.00 GCT 195 16.00 28.00 21.00 35.00 GCT 196 23.00 23.00 27.00 27.00 GCT 197 18.00 20.00 24.00 38.00 GCT 198 15.00 19.00 39.00 27.00 GCT 199 23.00 17.00 27.00 33.00 GCT 200 25.00 27.00 23.00 25.00 GCT 201 26.00 19.00 25.00 30.00 GCT 202 23.00 23.00 21.00 33.00 GCT 203 21.00 19.00 32.00 28.00 GCT 204 26.00 29.00 24.00 21.00 GCT 205 16.00 23.00 21.00 40.00 GCT 206 28.00 25.00 21.00 26.00 GCT 207 22.00 22.00 19.00 37.00 GCT 208 12.00 32.00 32.00 24.00 GCT 209 18.00 20.00 15.00 47.00 GCT 210 18.00 15.00 45.00 22.00 GCT 211 28.00 14.00 28.00 30.00 GCT 212 23.00 27.00 22.00 28.00 GCT 213 22.00 12.00 34.00 32.00 GCT 214 16.00 24.00 26.00 34.00 GCT 215 28.00 22.00 25.00 25.00 GCT 216 18.00 17.00 26.00 39.00 GCT 217 27.00 30.00 16.00 27.00 GCT 218 18.00 24.00 24.00 34.00 GCT 219 19.00 18.00 24.00 39.00 GCT 220 28.00 23.00 24.00 25.00 GCT 221 20.00 24.00 20.00 36.00 GCT 222 22.00 21.00 19.00 38.00 GCT 223 19.00 22.00 33.00 26.00 GCT 224 19.00 20.00 27.00 34.00 GCT 225 14.00 32.00 34.00 20.00 GCT 226 20.00 20.00 29.00 31.00 GCT 227 17.00 22.00 26.00 35.00 GCT 228 34.00 20.00 25.00 21.00 GCT 229 22.00 27.00 16.00 35.00 GCT 230 23.00 33.00 15.00 29.00 GCT 231 20.00 27.00 31.00 22.00 GCT 232 25.00 23.00 11.00 41.00 GCT 233 22.00 25.00 27.00 26.00 GCT 234 14.00 27.00 23.00 36.00 GCT 235 17.00 11.00 32.00 40.00 GCT 236 29.00 20.00 24.00 27.00 GCT 237 16.00 19.00 23.00 42.00 GCT 238 22.00 25.00 29.00 24.00 GCT 239 18.00 8.00 17.00 57.00 GCT 240 27.00 26.00 14.00 33.00 GCT 241 21.00 22.00 17.00 40.00 GCT 242 26.00 28.00 10.00 36.00 GCT 243 25.00 15.00 24.00 36.00 GCT 244 15.00 24.00 16.00 45.00 GCT 245 24.00 23.00 19.00 34.00 GCT 246 18.00 25.00 29.00 28.00 GCT 247 30.00 13.00 14.00 43.00 GCT 248 22.00 17.00 26.00 35.00 GCT 249 25.00 22.00 22.00 31.00 GCT 250 25.00 20.00 20.00 35.00 GCT 251 13.00 17.00 40.00 30.00 # ACGT content per cycle for first fragments. Use `grep ^FBC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%] FBC 1 21.43 27.55 36.73 14.29 2.04 0.00 FBC 2 34.00 15.00 12.00 39.00 0.00 0.00 FBC 3 32.00 25.00 9.00 34.00 0.00 0.00 FBC 4 21.00 26.00 16.00 37.00 0.00 0.00 FBC 5 37.00 20.00 14.00 29.00 0.00 0.00 FBC 6 28.00 26.00 17.00 29.00 0.00 0.00 FBC 7 31.00 14.00 31.00 24.00 0.00 0.00 FBC 8 52.00 13.00 21.00 14.00 0.00 0.00 FBC 9 15.00 31.00 20.00 34.00 0.00 0.00 FBC 10 39.00 15.00 20.00 26.00 0.00 0.00 FBC 11 23.00 14.00 30.00 33.00 0.00 0.00 FBC 12 32.00 24.00 22.00 22.00 0.00 0.00 FBC 13 25.00 13.00 23.00 39.00 0.00 0.00 FBC 14 27.27 20.20 28.28 24.24 1.01 0.00 FBC 15 28.00 21.00 24.00 27.00 0.00 0.00 FBC 16 27.00 15.00 20.00 38.00 0.00 0.00 FBC 17 27.00 24.00 15.00 34.00 0.00 0.00 FBC 18 30.00 27.00 21.00 22.00 0.00 0.00 FBC 19 28.00 26.00 21.00 25.00 0.00 0.00 FBC 20 22.00 26.00 15.00 37.00 0.00 0.00 FBC 21 35.00 17.00 20.00 28.00 0.00 0.00 FBC 22 36.00 26.00 18.00 20.00 0.00 0.00 FBC 23 32.32 17.17 15.15 35.35 1.01 0.00 FBC 24 38.00 10.00 24.00 28.00 0.00 0.00 FBC 25 33.00 22.00 18.00 27.00 0.00 0.00 FBC 26 31.00 16.00 18.00 35.00 0.00 0.00 FBC 27 37.00 11.00 29.00 23.00 0.00 0.00 FBC 28 32.00 15.00 23.00 30.00 0.00 0.00 FBC 29 30.00 26.00 25.00 19.00 0.00 0.00 FBC 30 28.00 19.00 15.00 38.00 0.00 0.00 FBC 31 34.00 30.00 13.00 23.00 0.00 0.00 FBC 32 47.00 21.00 19.00 13.00 0.00 0.00 FBC 33 24.00 24.00 14.00 38.00 0.00 0.00 FBC 34 36.00 16.00 21.00 27.00 0.00 0.00 FBC 35 30.00 24.00 21.00 25.00 0.00 0.00 FBC 36 43.00 25.00 16.00 16.00 0.00 0.00 FBC 37 38.00 16.00 20.00 26.00 0.00 0.00 FBC 38 25.00 26.00 25.00 24.00 0.00 0.00 FBC 39 23.00 42.00 18.00 17.00 0.00 0.00 FBC 40 35.00 18.00 19.00 28.00 0.00 0.00 FBC 41 37.00 29.00 18.00 16.00 0.00 0.00 FBC 42 32.00 24.00 21.00 23.00 0.00 0.00 FBC 43 32.00 30.00 14.00 24.00 0.00 0.00 FBC 44 19.00 28.00 21.00 32.00 0.00 0.00 FBC 45 43.00 18.00 25.00 14.00 0.00 0.00 FBC 46 26.00 20.00 23.00 31.00 0.00 0.00 FBC 47 37.00 31.00 15.00 17.00 0.00 0.00 FBC 48 30.00 27.00 15.00 28.00 0.00 0.00 FBC 49 31.00 32.00 11.00 26.00 0.00 0.00 FBC 50 44.00 21.00 9.00 26.00 0.00 0.00 FBC 51 40.00 28.00 14.00 18.00 0.00 0.00 FBC 52 40.00 25.00 19.00 16.00 0.00 0.00 FBC 53 21.00 29.00 25.00 25.00 0.00 0.00 FBC 54 38.00 19.00 24.00 19.00 0.00 0.00 FBC 55 29.00 23.00 16.00 32.00 0.00 0.00 FBC 56 31.00 25.00 11.00 33.00 0.00 0.00 FBC 57 18.00 24.00 23.00 35.00 0.00 0.00 FBC 58 27.00 35.00 21.00 17.00 0.00 0.00 FBC 59 35.00 25.00 22.00 18.00 0.00 0.00 FBC 60 28.00 30.00 15.00 27.00 0.00 0.00 FBC 61 28.00 24.00 24.00 24.00 0.00 0.00 FBC 62 28.00 26.00 13.00 33.00 0.00 0.00 FBC 63 29.00 32.00 22.00 17.00 0.00 0.00 FBC 64 37.00 23.00 24.00 16.00 0.00 0.00 FBC 65 33.00 22.00 16.00 29.00 0.00 0.00 FBC 66 35.00 24.00 16.00 25.00 0.00 0.00 FBC 67 39.00 25.00 17.00 19.00 0.00 0.00 FBC 68 34.00 31.00 12.00 23.00 0.00 0.00 FBC 69 39.00 21.00 19.00 21.00 0.00 0.00 FBC 70 37.00 20.00 15.00 28.00 0.00 0.00 FBC 71 22.00 36.00 24.00 18.00 0.00 0.00 FBC 72 25.00 32.00 22.00 21.00 0.00 0.00 FBC 73 34.00 23.00 19.00 24.00 0.00 0.00 FBC 74 26.00 33.00 12.00 29.00 0.00 0.00 FBC 75 37.00 15.00 16.00 32.00 0.00 0.00 FBC 76 26.00 31.00 22.00 21.00 0.00 0.00 FBC 77 37.00 22.00 17.00 24.00 0.00 0.00 FBC 78 25.00 38.00 18.00 19.00 0.00 0.00 FBC 79 19.00 28.00 24.00 29.00 0.00 0.00 FBC 80 28.00 20.00 27.00 25.00 0.00 0.00 FBC 81 16.00 26.00 26.00 32.00 0.00 0.00 FBC 82 32.00 35.00 18.00 15.00 0.00 0.00 FBC 83 27.00 28.00 11.00 34.00 0.00 0.00 FBC 84 16.00 43.00 19.00 22.00 0.00 0.00 FBC 85 33.00 29.00 12.00 26.00 0.00 0.00 FBC 86 18.00 49.00 14.00 19.00 0.00 0.00 FBC 87 37.00 17.00 17.00 29.00 0.00 0.00 FBC 88 21.00 31.00 24.00 24.00 0.00 0.00 FBC 89 27.00 30.00 24.00 19.00 0.00 0.00 FBC 90 13.00 25.00 23.00 39.00 0.00 0.00 FBC 91 25.00 34.00 20.00 21.00 0.00 0.00 FBC 92 25.00 22.00 23.00 30.00 0.00 0.00 FBC 93 22.00 35.00 18.00 25.00 0.00 0.00 FBC 94 24.00 18.00 23.00 35.00 0.00 0.00 FBC 95 22.22 40.40 12.12 25.25 1.01 0.00 FBC 96 25.00 24.00 18.00 33.00 0.00 0.00 FBC 97 26.00 35.00 17.00 22.00 0.00 0.00 FBC 98 15.15 35.35 20.20 29.29 1.01 0.00 FBC 99 22.00 30.00 28.00 20.00 0.00 0.00 FBC 100 20.00 18.00 23.00 39.00 0.00 0.00 FBC 101 23.00 46.00 13.00 18.00 0.00 0.00 FBC 102 15.00 21.00 29.00 35.00 0.00 0.00 FBC 103 30.00 26.00 16.00 28.00 0.00 0.00 FBC 104 23.00 31.00 19.00 27.00 0.00 0.00 FBC 105 33.00 31.00 23.00 13.00 0.00 0.00 FBC 106 24.00 30.00 27.00 19.00 0.00 0.00 FBC 107 16.16 38.38 21.21 24.24 1.01 0.00 FBC 108 22.22 28.28 26.26 23.23 1.01 0.00 FBC 109 15.00 33.00 20.00 32.00 0.00 0.00 FBC 110 12.12 39.39 20.20 28.28 1.01 0.00 FBC 111 23.23 31.31 24.24 21.21 1.01 0.00 FBC 112 35.35 28.28 16.16 20.20 1.01 0.00 FBC 113 18.18 21.21 34.34 26.26 1.01 0.00 FBC 114 15.00 31.00 35.00 19.00 0.00 0.00 FBC 115 27.00 26.00 22.00 25.00 0.00 0.00 FBC 116 24.00 31.00 33.00 12.00 0.00 0.00 FBC 117 23.00 25.00 17.00 35.00 0.00 0.00 FBC 118 26.00 15.00 34.00 25.00 0.00 0.00 FBC 119 24.00 38.00 17.00 21.00 0.00 0.00 FBC 120 16.00 25.00 26.00 33.00 0.00 0.00 FBC 121 31.31 31.31 25.25 12.12 1.01 0.00 FBC 122 16.00 21.00 27.00 36.00 0.00 0.00 FBC 123 22.00 45.00 13.00 20.00 0.00 0.00 FBC 124 8.00 33.00 33.00 26.00 0.00 0.00 FBC 125 21.00 30.00 16.00 33.00 0.00 0.00 FBC 126 28.00 15.00 30.00 27.00 0.00 0.00 FBC 127 27.00 17.00 21.00 35.00 0.00 0.00 FBC 128 20.00 33.00 32.00 15.00 0.00 0.00 FBC 129 27.00 24.00 29.00 20.00 0.00 0.00 FBC 130 25.00 21.00 21.00 33.00 0.00 0.00 FBC 131 18.00 39.00 25.00 18.00 0.00 0.00 FBC 132 22.00 29.00 22.00 27.00 0.00 0.00 FBC 133 12.00 29.00 38.00 21.00 0.00 0.00 FBC 134 27.00 20.00 30.00 23.00 0.00 0.00 FBC 135 16.00 19.00 35.00 30.00 0.00 0.00 FBC 136 31.00 31.00 16.00 22.00 0.00 0.00 FBC 137 24.00 21.00 31.00 24.00 0.00 0.00 FBC 138 14.00 39.00 20.00 27.00 0.00 0.00 FBC 139 22.00 27.00 27.00 24.00 0.00 0.00 FBC 140 15.00 22.00 31.00 32.00 0.00 0.00 FBC 141 20.00 23.00 26.00 31.00 0.00 0.00 FBC 142 19.00 26.00 41.00 14.00 0.00 0.00 FBC 143 21.00 25.00 26.00 28.00 0.00 0.00 FBC 144 23.00 28.00 29.00 20.00 0.00 0.00 FBC 145 24.00 16.00 34.00 26.00 0.00 0.00 FBC 146 24.00 17.00 38.00 21.00 0.00 0.00 FBC 147 30.00 22.00 31.00 17.00 0.00 0.00 FBC 148 13.00 25.00 40.00 22.00 0.00 0.00 FBC 149 26.00 23.00 24.00 27.00 0.00 0.00 FBC 150 16.00 26.00 27.00 31.00 0.00 0.00 FBC 151 17.00 32.00 31.00 20.00 0.00 0.00 FBC 152 21.00 14.00 33.00 32.00 0.00 0.00 FBC 153 21.00 25.00 29.00 25.00 0.00 0.00 FBC 154 19.00 20.00 30.00 31.00 0.00 0.00 FBC 155 21.00 24.00 21.00 34.00 0.00 0.00 FBC 156 13.00 24.00 35.00 28.00 0.00 0.00 FBC 157 21.00 28.00 26.00 25.00 0.00 0.00 FBC 158 24.00 26.00 28.00 22.00 0.00 0.00 FBC 159 16.00 10.00 49.00 25.00 0.00 0.00 FBC 160 25.00 22.00 31.00 22.00 0.00 0.00 FBC 161 13.00 18.00 50.00 19.00 0.00 0.00 FBC 162 30.00 14.00 25.00 31.00 0.00 0.00 FBC 163 16.00 17.00 40.00 27.00 0.00 0.00 FBC 164 25.00 17.00 22.00 36.00 0.00 0.00 FBC 165 16.00 19.00 34.00 31.00 0.00 0.00 FBC 166 15.00 39.00 27.00 19.00 0.00 0.00 FBC 167 16.00 15.00 38.00 31.00 0.00 0.00 FBC 168 12.00 26.00 29.00 33.00 0.00 0.00 FBC 169 16.00 18.00 26.00 40.00 0.00 0.00 FBC 170 16.00 22.00 29.00 33.00 0.00 0.00 FBC 171 17.00 26.00 35.00 22.00 0.00 0.00 FBC 172 14.00 18.00 34.00 34.00 0.00 0.00 FBC 173 25.00 16.00 34.00 25.00 0.00 0.00 FBC 174 14.00 23.00 34.00 29.00 0.00 0.00 FBC 175 33.00 16.00 37.00 14.00 0.00 0.00 FBC 176 16.00 28.00 33.00 23.00 0.00 0.00 FBC 177 14.00 20.00 29.00 37.00 0.00 0.00 FBC 178 13.00 26.00 30.00 31.00 0.00 0.00 FBC 179 12.00 16.00 24.00 48.00 0.00 0.00 FBC 180 20.00 19.00 37.00 24.00 0.00 0.00 FBC 181 20.00 22.00 33.00 25.00 0.00 0.00 FBC 182 30.00 16.00 25.00 29.00 0.00 0.00 FBC 183 21.00 12.00 30.00 37.00 0.00 0.00 FBC 184 13.00 28.00 31.00 28.00 0.00 0.00 FBC 185 14.00 32.00 33.00 21.00 0.00 0.00 FBC 186 24.00 25.00 33.00 18.00 0.00 0.00 FBC 187 14.00 15.00 39.00 32.00 0.00 0.00 FBC 188 26.00 24.00 25.00 25.00 0.00 0.00 FBC 189 15.00 21.00 35.00 29.00 0.00 0.00 FBC 190 22.00 32.00 21.00 25.00 0.00 0.00 FBC 191 22.00 23.00 27.00 28.00 0.00 0.00 FBC 192 32.00 24.00 14.00 30.00 0.00 0.00 FBC 193 19.00 25.00 26.00 30.00 0.00 0.00 FBC 194 16.00 33.00 25.00 26.00 0.00 0.00 FBC 195 16.00 24.00 25.00 35.00 0.00 0.00 FBC 196 20.00 28.00 22.00 30.00 0.00 0.00 FBC 197 22.00 22.00 22.00 34.00 0.00 0.00 FBC 198 19.00 23.00 35.00 23.00 0.00 0.00 FBC 199 18.00 20.00 24.00 38.00 0.00 0.00 FBC 200 17.00 31.00 19.00 33.00 0.00 0.00 FBC 201 28.00 23.00 21.00 28.00 0.00 0.00 FBC 202 20.00 26.00 18.00 36.00 0.00 0.00 FBC 203 22.00 30.00 21.00 27.00 0.00 0.00 FBC 204 28.00 29.00 24.00 19.00 0.00 0.00 FBC 205 23.00 20.00 24.00 33.00 0.00 0.00 FBC 206 25.00 24.00 22.00 29.00 0.00 0.00 FBC 207 23.00 21.00 20.00 36.00 0.00 0.00 FBC 208 16.00 38.00 26.00 20.00 0.00 0.00 FBC 209 14.00 26.00 9.00 51.00 0.00 0.00 FBC 210 19.00 24.00 36.00 21.00 0.00 0.00 FBC 211 24.00 26.00 16.00 34.00 0.00 0.00 FBC 212 19.00 35.00 14.00 32.00 0.00 0.00 FBC 213 26.00 18.00 28.00 28.00 0.00 0.00 FBC 214 19.00 25.00 25.00 31.00 0.00 0.00 FBC 215 24.00 26.00 21.00 29.00 0.00 0.00 FBC 216 25.00 18.00 25.00 32.00 0.00 0.00 FBC 217 25.00 28.00 18.00 29.00 0.00 0.00 FBC 218 22.00 30.00 18.00 30.00 0.00 0.00 FBC 219 15.00 24.00 18.00 43.00 0.00 0.00 FBC 220 23.00 24.00 23.00 30.00 0.00 0.00 FBC 221 23.00 23.00 21.00 33.00 0.00 0.00 FBC 222 21.00 22.00 18.00 39.00 0.00 0.00 FBC 223 21.00 32.00 23.00 24.00 0.00 0.00 FBC 224 26.00 25.00 22.00 27.00 0.00 0.00 FBC 225 15.00 39.00 27.00 19.00 0.00 0.00 FBC 226 20.00 26.00 23.00 31.00 0.00 0.00 FBC 227 24.00 27.00 21.00 28.00 0.00 0.00 FBC 228 32.00 18.00 27.00 23.00 0.00 0.00 FBC 229 23.00 22.00 21.00 34.00 0.00 0.00 FBC 230 19.00 31.00 17.00 33.00 0.00 0.00 FBC 231 26.00 29.00 29.00 16.00 0.00 0.00 FBC 232 22.00 20.00 14.00 44.00 0.00 0.00 FBC 233 20.00 29.00 23.00 28.00 0.00 0.00 FBC 234 19.00 28.00 22.00 31.00 0.00 0.00 FBC 235 23.00 19.00 24.00 34.00 0.00 0.00 FBC 236 27.00 26.00 18.00 29.00 0.00 0.00 FBC 237 25.00 20.00 22.00 33.00 0.00 0.00 FBC 238 21.00 34.00 20.00 25.00 0.00 0.00 FBC 239 22.00 8.00 17.00 53.00 0.00 0.00 FBC 240 29.00 22.00 18.00 31.00 0.00 0.00 FBC 241 24.00 23.00 16.00 37.00 0.00 0.00 FBC 242 32.00 22.00 16.00 30.00 0.00 0.00 FBC 243 20.00 16.00 23.00 41.00 0.00 0.00 FBC 244 26.00 23.00 17.00 34.00 0.00 0.00 FBC 245 32.00 23.00 19.00 26.00 0.00 0.00 FBC 246 24.00 33.00 21.00 22.00 0.00 0.00 FBC 247 34.00 15.00 12.00 39.00 0.00 0.00 FBC 248 14.00 19.00 24.00 43.00 0.00 0.00 FBC 249 25.00 24.00 20.00 31.00 0.00 0.00 FBC 250 30.00 25.00 15.00 30.00 0.00 0.00 FBC 251 14.00 24.00 33.00 29.00 0.00 0.00 # ACGT raw counters for first fragments. Use `grep ^FTC | cut -f 2-` to extract this part. The columns are: A,C,G,T,N base counters FTC 6178 6247 5821 6841 13 # ACGT content per cycle for last fragments. Use `grep ^LBC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%] LBC 1 22.45 32.65 31.63 13.27 2.04 0.00 LBC 2 26.00 17.00 10.00 47.00 0.00 0.00 LBC 3 34.00 25.00 9.00 32.00 0.00 0.00 LBC 4 13.00 32.00 10.00 45.00 0.00 0.00 LBC 5 37.00 24.00 10.00 29.00 0.00 0.00 LBC 6 44.00 26.00 17.00 13.00 0.00 0.00 LBC 7 28.00 13.00 32.00 27.00 0.00 0.00 LBC 8 49.00 16.00 18.00 17.00 0.00 0.00 LBC 9 19.00 35.00 16.00 30.00 0.00 0.00 LBC 10 35.00 13.00 22.00 30.00 0.00 0.00 LBC 11 18.00 15.00 29.00 38.00 0.00 0.00 LBC 12 28.00 24.00 22.00 26.00 0.00 0.00 LBC 13 29.00 17.00 19.00 35.00 0.00 0.00 LBC 14 21.21 24.24 24.24 30.30 1.01 0.00 LBC 15 23.00 20.00 25.00 32.00 0.00 0.00 LBC 16 35.00 15.00 20.00 30.00 0.00 0.00 LBC 17 29.00 26.00 13.00 32.00 0.00 0.00 LBC 18 31.00 30.00 18.00 21.00 0.00 0.00 LBC 19 30.00 26.00 21.00 23.00 0.00 0.00 LBC 20 23.00 21.00 20.00 36.00 0.00 0.00 LBC 21 36.00 18.00 19.00 27.00 0.00 0.00 LBC 22 39.00 31.00 13.00 17.00 0.00 0.00 LBC 23 30.30 21.21 11.11 37.37 1.01 0.00 LBC 24 36.00 14.00 20.00 30.00 0.00 0.00 LBC 25 38.00 23.00 17.00 22.00 0.00 0.00 LBC 26 36.00 21.00 13.00 30.00 0.00 0.00 LBC 27 32.00 18.00 22.00 28.00 0.00 0.00 LBC 28 30.00 13.00 25.00 32.00 0.00 0.00 LBC 29 30.00 28.00 23.00 19.00 0.00 0.00 LBC 30 34.00 21.00 13.00 32.00 0.00 0.00 LBC 31 33.00 29.00 14.00 24.00 0.00 0.00 LBC 32 38.00 20.00 20.00 22.00 0.00 0.00 LBC 33 27.00 23.00 15.00 35.00 0.00 0.00 LBC 34 43.00 17.00 20.00 20.00 0.00 0.00 LBC 35 35.00 23.00 22.00 20.00 0.00 0.00 LBC 36 41.00 25.00 16.00 18.00 0.00 0.00 LBC 37 38.00 18.00 18.00 26.00 0.00 0.00 LBC 38 23.00 26.00 25.00 26.00 0.00 0.00 LBC 39 22.00 41.00 19.00 18.00 0.00 0.00 LBC 40 29.00 14.00 23.00 34.00 0.00 0.00 LBC 41 29.00 27.00 20.00 24.00 0.00 0.00 LBC 42 29.00 27.00 18.00 26.00 0.00 0.00 LBC 43 38.00 28.00 16.00 18.00 0.00 0.00 LBC 44 21.00 26.00 23.00 30.00 0.00 0.00 LBC 45 38.00 25.00 18.00 19.00 0.00 0.00 LBC 46 27.00 21.00 22.00 30.00 0.00 0.00 LBC 47 40.00 28.00 18.00 14.00 0.00 0.00 LBC 48 25.00 22.00 20.00 33.00 0.00 0.00 LBC 49 26.00 33.00 10.00 31.00 0.00 0.00 LBC 50 49.00 20.00 10.00 21.00 0.00 0.00 LBC 51 29.00 29.00 13.00 29.00 0.00 0.00 LBC 52 43.00 22.00 22.00 13.00 0.00 0.00 LBC 53 19.00 27.00 27.00 27.00 0.00 0.00 LBC 54 25.00 18.00 25.00 32.00 0.00 0.00 LBC 55 32.00 22.00 17.00 29.00 0.00 0.00 LBC 56 36.00 20.00 16.00 28.00 0.00 0.00 LBC 57 28.00 24.00 23.00 25.00 0.00 0.00 LBC 58 23.00 39.00 17.00 21.00 0.00 0.00 LBC 59 33.00 21.00 26.00 20.00 0.00 0.00 LBC 60 30.00 26.00 19.00 25.00 0.00 0.00 LBC 61 23.00 23.00 25.00 29.00 0.00 0.00 LBC 62 35.00 19.00 20.00 26.00 0.00 0.00 LBC 63 26.00 25.00 29.00 20.00 0.00 0.00 LBC 64 30.00 20.00 27.00 23.00 0.00 0.00 LBC 65 38.00 17.00 21.00 24.00 0.00 0.00 LBC 66 33.00 26.00 14.00 27.00 0.00 0.00 LBC 67 35.00 21.00 21.00 23.00 0.00 0.00 LBC 68 39.00 28.00 15.00 18.00 0.00 0.00 LBC 69 38.00 18.00 22.00 22.00 0.00 0.00 LBC 70 40.00 13.00 22.00 25.00 0.00 0.00 LBC 71 29.00 41.00 19.00 11.00 0.00 0.00 LBC 72 33.00 26.00 28.00 13.00 0.00 0.00 LBC 73 31.00 18.00 24.00 27.00 0.00 0.00 LBC 74 31.00 32.00 13.00 24.00 0.00 0.00 LBC 75 46.00 10.00 21.00 23.00 0.00 0.00 LBC 76 23.00 28.00 25.00 24.00 0.00 0.00 LBC 77 35.00 20.00 19.00 26.00 0.00 0.00 LBC 78 29.00 30.00 26.00 15.00 0.00 0.00 LBC 79 24.00 25.00 27.00 24.00 0.00 0.00 LBC 80 40.00 18.00 29.00 13.00 0.00 0.00 LBC 81 18.00 26.00 26.00 30.00 0.00 0.00 LBC 82 30.00 25.00 28.00 17.00 0.00 0.00 LBC 83 36.00 25.00 14.00 25.00 0.00 0.00 LBC 84 22.00 39.00 23.00 16.00 0.00 0.00 LBC 85 42.00 20.00 21.00 17.00 0.00 0.00 LBC 86 12.00 47.00 16.00 25.00 0.00 0.00 LBC 87 45.00 15.00 19.00 21.00 0.00 0.00 LBC 88 26.00 24.00 31.00 19.00 0.00 0.00 LBC 89 26.00 25.00 29.00 20.00 0.00 0.00 LBC 90 24.00 22.00 26.00 28.00 0.00 0.00 LBC 91 29.00 30.00 24.00 17.00 0.00 0.00 LBC 92 22.00 13.00 32.00 33.00 0.00 0.00 LBC 93 29.00 40.00 13.00 18.00 0.00 0.00 LBC 94 30.00 16.00 25.00 29.00 0.00 0.00 LBC 95 31.31 35.35 17.17 16.16 1.01 0.00 LBC 96 34.00 27.00 15.00 24.00 0.00 0.00 LBC 97 32.00 27.00 25.00 16.00 0.00 0.00 LBC 98 21.21 31.31 24.24 23.23 1.01 0.00 LBC 99 27.00 37.00 21.00 15.00 0.00 0.00 LBC 100 29.00 15.00 26.00 30.00 0.00 0.00 LBC 101 27.00 34.00 25.00 14.00 0.00 0.00 LBC 102 20.00 14.00 36.00 30.00 0.00 0.00 LBC 103 32.00 26.00 16.00 26.00 0.00 0.00 LBC 104 30.00 28.00 22.00 20.00 0.00 0.00 LBC 105 35.00 35.00 19.00 11.00 0.00 0.00 LBC 106 22.00 32.00 25.00 21.00 0.00 0.00 LBC 107 19.19 33.33 26.26 21.21 1.01 0.00 LBC 108 27.27 33.33 21.21 18.18 1.01 0.00 LBC 109 19.00 29.00 24.00 28.00 0.00 0.00 LBC 110 20.20 31.31 28.28 20.20 1.01 0.00 LBC 111 25.25 33.33 22.22 19.19 1.01 0.00 LBC 112 39.39 28.28 16.16 16.16 1.01 0.00 LBC 113 21.21 24.24 31.31 23.23 1.01 0.00 LBC 114 19.00 31.00 35.00 15.00 0.00 0.00 LBC 115 32.00 23.00 25.00 20.00 0.00 0.00 LBC 116 20.00 29.00 35.00 16.00 0.00 0.00 LBC 117 31.00 21.00 21.00 27.00 0.00 0.00 LBC 118 25.00 14.00 35.00 26.00 0.00 0.00 LBC 119 21.00 31.00 24.00 24.00 0.00 0.00 LBC 120 19.00 24.00 27.00 30.00 0.00 0.00 LBC 121 24.24 36.36 20.20 19.19 1.01 0.00 LBC 122 18.00 25.00 23.00 34.00 0.00 0.00 LBC 123 25.00 48.00 10.00 17.00 0.00 0.00 LBC 124 10.00 31.00 35.00 24.00 0.00 0.00 LBC 125 27.00 24.00 22.00 27.00 0.00 0.00 LBC 126 24.00 19.00 26.00 31.00 0.00 0.00 LBC 127 26.00 16.00 22.00 36.00 0.00 0.00 LBC 128 16.00 35.00 30.00 19.00 0.00 0.00 LBC 129 24.00 27.00 26.00 23.00 0.00 0.00 LBC 130 25.00 19.00 23.00 33.00 0.00 0.00 LBC 131 17.00 40.00 24.00 19.00 0.00 0.00 LBC 132 20.00 27.00 24.00 29.00 0.00 0.00 LBC 133 15.00 34.00 33.00 18.00 0.00 0.00 LBC 134 22.00 19.00 31.00 28.00 0.00 0.00 LBC 135 17.00 28.00 26.00 29.00 0.00 0.00 LBC 136 25.00 33.00 14.00 28.00 0.00 0.00 LBC 137 21.00 22.00 30.00 27.00 0.00 0.00 LBC 138 15.00 30.00 29.00 26.00 0.00 0.00 LBC 139 19.00 32.00 22.00 27.00 0.00 0.00 LBC 140 19.00 24.00 29.00 28.00 0.00 0.00 LBC 141 21.00 24.00 25.00 30.00 0.00 0.00 LBC 142 17.00 32.00 35.00 16.00 0.00 0.00 LBC 143 23.00 23.00 28.00 26.00 0.00 0.00 LBC 144 20.00 33.00 24.00 23.00 0.00 0.00 LBC 145 20.00 26.00 24.00 30.00 0.00 0.00 LBC 146 26.00 15.00 40.00 19.00 0.00 0.00 LBC 147 23.00 23.00 30.00 24.00 0.00 0.00 LBC 148 12.00 32.00 33.00 23.00 0.00 0.00 LBC 149 27.00 24.00 23.00 26.00 0.00 0.00 LBC 150 12.00 32.00 21.00 35.00 0.00 0.00 LBC 151 22.00 29.00 34.00 15.00 0.00 0.00 LBC 152 16.00 21.00 26.00 37.00 0.00 0.00 LBC 153 24.00 20.00 34.00 22.00 0.00 0.00 LBC 154 25.00 22.00 28.00 25.00 0.00 0.00 LBC 155 21.00 28.00 17.00 34.00 0.00 0.00 LBC 156 16.00 23.00 36.00 25.00 0.00 0.00 LBC 157 23.00 34.00 20.00 23.00 0.00 0.00 LBC 158 21.00 33.00 21.00 25.00 0.00 0.00 LBC 159 19.00 15.00 44.00 22.00 0.00 0.00 LBC 160 24.00 31.00 22.00 23.00 0.00 0.00 LBC 161 13.00 28.00 40.00 19.00 0.00 0.00 LBC 162 33.00 19.00 20.00 28.00 0.00 0.00 LBC 163 23.00 26.00 31.00 20.00 0.00 0.00 LBC 164 33.00 19.00 20.00 28.00 0.00 0.00 LBC 165 13.00 16.00 37.00 34.00 0.00 0.00 LBC 166 20.00 36.00 30.00 14.00 0.00 0.00 LBC 167 17.00 28.00 25.00 30.00 0.00 0.00 LBC 168 16.00 24.00 31.00 29.00 0.00 0.00 LBC 169 21.00 23.00 21.00 35.00 0.00 0.00 LBC 170 22.00 24.00 27.00 27.00 0.00 0.00 LBC 171 23.00 30.00 31.00 16.00 0.00 0.00 LBC 172 24.00 22.00 30.00 24.00 0.00 0.00 LBC 173 24.00 17.00 33.00 26.00 0.00 0.00 LBC 174 21.00 24.00 33.00 22.00 0.00 0.00 LBC 175 34.00 19.00 34.00 13.00 0.00 0.00 LBC 176 17.00 37.00 24.00 22.00 0.00 0.00 LBC 177 24.00 24.00 25.00 27.00 0.00 0.00 LBC 178 19.00 26.00 30.00 25.00 0.00 0.00 LBC 179 24.00 20.00 20.00 36.00 0.00 0.00 LBC 180 22.00 25.00 31.00 22.00 0.00 0.00 LBC 181 21.00 17.00 38.00 24.00 0.00 0.00 LBC 182 35.00 21.00 20.00 24.00 0.00 0.00 LBC 183 28.00 15.00 27.00 30.00 0.00 0.00 LBC 184 17.00 30.00 29.00 24.00 0.00 0.00 LBC 185 16.00 32.00 33.00 19.00 0.00 0.00 LBC 186 21.00 22.00 36.00 21.00 0.00 0.00 LBC 187 24.00 13.00 41.00 22.00 0.00 0.00 LBC 188 29.00 19.00 30.00 22.00 0.00 0.00 LBC 189 19.00 23.00 33.00 25.00 0.00 0.00 LBC 190 24.00 28.00 25.00 23.00 0.00 0.00 LBC 191 28.00 21.00 29.00 22.00 0.00 0.00 LBC 192 37.00 25.00 13.00 25.00 0.00 0.00 LBC 193 18.00 26.00 25.00 31.00 0.00 0.00 LBC 194 21.00 34.00 24.00 21.00 0.00 0.00 LBC 195 16.00 28.00 21.00 35.00 0.00 0.00 LBC 196 23.00 23.00 27.00 27.00 0.00 0.00 LBC 197 18.00 20.00 24.00 38.00 0.00 0.00 LBC 198 15.00 19.00 39.00 27.00 0.00 0.00 LBC 199 23.00 17.00 27.00 33.00 0.00 0.00 LBC 200 25.00 27.00 23.00 25.00 0.00 0.00 LBC 201 26.00 19.00 25.00 30.00 0.00 0.00 LBC 202 23.00 23.00 21.00 33.00 0.00 0.00 LBC 203 21.00 19.00 32.00 28.00 0.00 0.00 LBC 204 26.00 29.00 24.00 21.00 0.00 0.00 LBC 205 16.00 23.00 21.00 40.00 0.00 0.00 LBC 206 28.00 25.00 21.00 26.00 0.00 0.00 LBC 207 22.00 22.00 19.00 37.00 0.00 0.00 LBC 208 12.00 32.00 32.00 24.00 0.00 0.00 LBC 209 18.00 20.00 15.00 47.00 0.00 0.00 LBC 210 18.00 15.00 45.00 22.00 0.00 0.00 LBC 211 28.00 14.00 28.00 30.00 0.00 0.00 LBC 212 23.00 27.00 22.00 28.00 0.00 0.00 LBC 213 22.00 12.00 34.00 32.00 0.00 0.00 LBC 214 16.00 24.00 26.00 34.00 0.00 0.00 LBC 215 28.00 22.00 25.00 25.00 0.00 0.00 LBC 216 18.00 17.00 26.00 39.00 0.00 0.00 LBC 217 27.00 30.00 16.00 27.00 0.00 0.00 LBC 218 18.00 24.00 24.00 34.00 0.00 0.00 LBC 219 19.00 18.00 24.00 39.00 0.00 0.00 LBC 220 28.00 23.00 24.00 25.00 0.00 0.00 LBC 221 20.00 24.00 20.00 36.00 0.00 0.00 LBC 222 22.00 21.00 19.00 38.00 0.00 0.00 LBC 223 19.00 22.00 33.00 26.00 0.00 0.00 LBC 224 19.00 20.00 27.00 34.00 0.00 0.00 LBC 225 14.00 32.00 34.00 20.00 0.00 0.00 LBC 226 20.00 20.00 29.00 31.00 0.00 0.00 LBC 227 17.00 22.00 26.00 35.00 0.00 0.00 LBC 228 34.00 20.00 25.00 21.00 0.00 0.00 LBC 229 22.00 27.00 16.00 35.00 0.00 0.00 LBC 230 23.00 33.00 15.00 29.00 0.00 0.00 LBC 231 20.00 27.00 31.00 22.00 0.00 0.00 LBC 232 25.00 23.00 11.00 41.00 0.00 0.00 LBC 233 22.00 25.00 27.00 26.00 0.00 0.00 LBC 234 14.00 27.00 23.00 36.00 0.00 0.00 LBC 235 17.00 11.00 32.00 40.00 0.00 0.00 LBC 236 29.00 20.00 24.00 27.00 0.00 0.00 LBC 237 16.00 19.00 23.00 42.00 0.00 0.00 LBC 238 22.00 25.00 29.00 24.00 0.00 0.00 LBC 239 18.00 8.00 17.00 57.00 0.00 0.00 LBC 240 27.00 26.00 14.00 33.00 0.00 0.00 LBC 241 21.00 22.00 17.00 40.00 0.00 0.00 LBC 242 26.00 28.00 10.00 36.00 0.00 0.00 LBC 243 25.00 15.00 24.00 36.00 0.00 0.00 LBC 244 15.00 24.00 16.00 45.00 0.00 0.00 LBC 245 24.00 23.00 19.00 34.00 0.00 0.00 LBC 246 18.00 25.00 29.00 28.00 0.00 0.00 LBC 247 30.00 13.00 14.00 43.00 0.00 0.00 LBC 248 22.00 17.00 26.00 35.00 0.00 0.00 LBC 249 25.00 22.00 22.00 31.00 0.00 0.00 LBC 250 25.00 20.00 20.00 35.00 0.00 0.00 LBC 251 13.00 17.00 40.00 30.00 0.00 0.00 # ACGT raw counters for last fragments. Use `grep ^LTC | cut -f 2-` to extract this part. The columns are: A,C,G,T,N base counters LTC 6413 6102 5966 6606 13 # Insert sizes. Use `grep ^IS | cut -f 2-` to extract this part. The columns are: insert size, pairs total, inward oriented pairs, outward oriented pairs, other pairs # Read lengths. Use `grep ^RL | cut -f 2-` to extract this part. The columns are: read length, count RL 251 200 # Read lengths - first fragments. Use `grep ^FRL | cut -f 2-` to extract this part. The columns are: read length, count FRL 251 100 # Read lengths - last fragments. Use `grep ^LRL | cut -f 2-` to extract this part. The columns are: read length, count LRL 251 100 # Mapping qualities for reads !(UNMAP|SECOND|SUPPL|QCFAIL|DUP). Use `grep ^MAPQ | cut -f 2-` to extract this part. The columns are: mapq, count MAPQ 0 6 MAPQ 3 6 MAPQ 8 3 MAPQ 23 2 MAPQ 24 4 MAPQ 40 2 MAPQ 42 2 # Indel distribution. Use `grep ^ID | cut -f 2-` to extract this part. The columns are: length, number of insertions, number of deletions ID 1 1 0 ID 2 1 0 ID 4 2 0 ID 10 5 0 ID 13 1 0 ID 14 1 0 ID 15 1 0 ID 18 1 0 ID 21 1 0 ID 22 1 0 ID 23 2 0 ID 24 3 0 ID 29 1 0 ID 35 2 0 ID 38 2 0 # Indels per cycle. Use `grep ^IC | cut -f 2-` to extract this part. The columns are: cycle, number of insertions (fwd), .. (rev) , number of deletions (fwd), .. (rev) IC 2 1 0 0 0 IC 4 2 0 0 0 IC 5 3 0 0 0 IC 210 2 0 0 0 IC 219 1 0 0 0 IC 220 1 0 0 0 IC 224 2 0 0 0 IC 225 2 0 0 0 IC 226 1 0 0 0 IC 228 1 0 0 0 IC 230 1 0 0 0 IC 233 1 0 0 0 IC 234 1 0 0 0 IC 235 1 0 0 0 IC 236 1 0 0 0 IC 239 1 0 0 0 IC 240 1 0 0 0 IC 241 1 0 0 0 IC 247 1 0 0 0 # Coverage distribution. Use `grep ^COV | cut -f 2-` to extract this part. COV [2-2] 2 1 COV [3-3] 3 3 COV [4-4] 4 1 COV [5-5] 5 5 COV [9-9] 9 3 COV [10-10] 10 2 COV [11-11] 11 3 COV [12-12] 12 2 COV [13-13] 13 1 COV [14-14] 14 1 COV [15-15] 15 1 COV [18-18] 18 1 COV [20-20] 20 6 COV [21-21] 21 6 COV [23-23] 23 3 COV [24-24] 24 1 COV [25-25] 25 211 # GC-depth. Use `grep ^GCD | cut -f 2-` to extract this part. The columns are: GC%, unique sequence percentiles, 10th, 25th, 50th, 75th and 90th depth percentile GCD 0.0 100.000 0.000 0.000 0.000 0.000 0.000