diff tool-data/annovar_index.loc.sample @ 1:a6c64723f5ce

Uploaded
author devteam
date Mon, 02 Dec 2013 15:31:17 -0500
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+++ b/tool-data/annovar_index.loc.sample	Mon Dec 02 15:31:17 2013 -0500
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+#
+# Database name (value), dbkey, type, and path.
+#
+# Sample entries for gene-based annotations:
+#refGene	hg19	gene_ann	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#wgEncodeGencodeCompV14	hg19	gene_ann	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#
+# Samples entries for region-based annotations:
+#
+#genomicSuperDups	hg19	region	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#phastConsElements46way	hg19	region	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#
+# Sample entries for filter-based annotations:
+#
+#1000g2012apr_all	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#avsift	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#snp137NonFlagged	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#esp6500si_all	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndice/
+#snp137	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#cosmic64	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
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