# HG changeset patch
# User devteam
# Date 1386016277 18000
# Node ID a6c64723f5ce9f8e74dfc7f4a8c3a7072dfdba03
# Parent  75b252cf390e723a489767da7fb5fa6af367299f
Uploaded

diff -r 75b252cf390e -r a6c64723f5ce tool-data/annovar_index.loc
--- a/tool-data/annovar_index.loc	Mon Dec 02 15:29:39 2013 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,20 +0,0 @@
-#
-# Database name (value), dbkey, type, and path.
-#
-# Sample entries for gene-based annotations:
-#refGene	hg19	gene_ann	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#wgEncodeGencodeCompV14	hg19	gene_ann	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#
-# Samples entries for region-based annotations:
-#
-#genomicSuperDups	hg19	region	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#phastConsElements46way	hg19	region	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#
-# Sample entries for filter-based annotations:
-#
-#1000g2012apr_all	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#avsift	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#snp137NonFlagged	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#esp6500si_all	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndice/
-#snp137	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
-#cosmic64	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
\ No newline at end of file
diff -r 75b252cf390e -r a6c64723f5ce tool-data/annovar_index.loc.sample
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/annovar_index.loc.sample	Mon Dec 02 15:31:17 2013 -0500
@@ -0,0 +1,20 @@
+#
+# Database name (value), dbkey, type, and path.
+#
+# Sample entries for gene-based annotations:
+#refGene	hg19	gene_ann	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#wgEncodeGencodeCompV14	hg19	gene_ann	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#
+# Samples entries for region-based annotations:
+#
+#genomicSuperDups	hg19	region	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#phastConsElements46way	hg19	region	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#
+# Sample entries for filter-based annotations:
+#
+#1000g2012apr_all	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#avsift	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#snp137NonFlagged	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#esp6500si_all	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndice/
+#snp137	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
+#cosmic64	hg19	filter	/aut/bx/jgoecks/galaxy/data/Homo_sapiens/UCSC/hg19/AnnovarIndices/
\ No newline at end of file