Mercurial > repos > devteam > vcfaddinfo
view vcfaddinfo.xml @ 0:4d4b16af67aa draft
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author | devteam |
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date | Thu, 19 Mar 2015 12:21:38 -0400 |
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children | 196ed76d2619 |
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<tool id="vcfaddinfo" name="VCFaddinfo:" version="0.0.3"> <description>Adds info fields from the second dataset which are not present in the first dataset</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements"></expand> <expand macro="stdio" /> <command>vcfaddinfo "${input1}" "${input2}" > "${out_file1}"</command> <inputs> <param format="vcf" name="input1" type="data" label="Add INFO fields to" help="First VCF dataset"/> <param format="vcf" name="input2" type="data" label="using INFO fields from" help="Second VCF dataset"/> </inputs> <outputs> <data format="vcf" name="out_file1" /> </outputs> <tests> <test> <param name="input1" value="vcfaddinfo-input1.vcf"/> <param name="input2" value="vcflib.vcf"/> <output name="out_file1" file="vcfaddinfo-test1.vcf" /> </test> </tests> <help> Adds info fields from the second dataset which are not present in the first dataset. ----- Vcfaddinfo @IS_PART_OF_VCFLIB@ </help> <expand macro="citations" /> </tool>