Mercurial > repos > devteam > vcfannotate

diff vcfannotate.xml @ 4:01e0321aca98 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/vcflib/vcfannotate commit 36e9065027cc7bf721e9d203208477ee88906c57"
author iuc
date Thu, 23 Jan 2020 08:03:53 -0500
parents 6faa2c4c71d2
children
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--- a/vcfannotate.xml	Mon Mar 26 12:19:56 2018 -0400
+++ b/vcfannotate.xml	Thu Jan 23 08:03:53 2020 -0500
@@ -5,7 +5,7 @@
   </macros>
   <expand macro="requirements"/>
   <expand macro="stdio" />
-  <command>vcfannotate --key "${key_option}" -b "${bed_data}" "${input}" > "${out_file1}"</command>
+  <command>vcfannotate --key '${key_option}' -b '${bed_data}' '${input}' > '${out_file1}'</command>
   <inputs>
     <param format="vcf" name="input" type="data" label="Select VCF dataset"/>
     <param name="bed_data" type="data" format="bed" label="Select BED dataset to itersect with"/>