Mercurial > repos > devteam > vcfbedintersect
diff vcfbedintersect.xml @ 4:aea8e90ad788 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/vcflib/vcfbedintersect commit 36e9065027cc7bf721e9d203208477ee88906c57"
| author | iuc |
|---|---|
| date | Thu, 23 Jan 2020 08:05:00 -0500 |
| parents | 9edfe5145ba8 |
| children |
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--- a/vcfbedintersect.xml Mon Mar 26 12:21:18 2018 -0400 +++ b/vcfbedintersect.xml Thu Jan 23 08:05:00 2020 -0500 @@ -7,9 +7,9 @@ <expand macro="stdio" /> <command> #if str($bed_vs_interval.bed_vs_interval_selector) == "bed": - vcfintersect -b "${bed_vs_interval.bed_input}" ${invert} "${vcf_input}" > "${out_file1}" + vcfintersect -b '${bed_vs_interval.bed_input}' ${invert} '${vcf_input}' > '${out_file1}' #else: - vcfintersect -R "${bed_vs_interval.int_input}" ${invert} "${vcf_input}" > "${out_file1}" + vcfintersect -R '${bed_vs_interval.int_input}' ${invert} '${vcf_input}' > '${out_file1}' #end if </command> <inputs>