Mercurial > repos > devteam > vcffilter

comparison vcffilter.xml @ 6:9442e22779ca draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/vcflib/vcffilter commit 270bb876857d700ecc7fb9d1757c63dcfeb401aa
author iuc
date Thu, 14 Mar 2019 17:49:22 -0400
parents de885f4afb7f
children eae7c08ebb6f
comparison
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5:de885f4afb7f 6:9442e22779ca
99 99
100 Operators can be any of:: 100 Operators can be any of::
101 101
102 =, !, <, >, |, & 102 =, !, <, >, |, &
103 103
104 Obtain logical negation through the use of parentheses, e.g. "! ( DP = 10 )"
105 Please mind the blank space between parentheses and the arguments.
106
104 To restrict output to a specific location use the -r option (must be used in conjunction with -g or -f):: 107 To restrict output to a specific location use the -r option (must be used in conjunction with -g or -f)::
105 108
106 -r chr20:14000-15000 # only output calls between positions 14,000 and 15,000 on chromosome 20 109 -r chr20:14000-15000 # only output calls between positions 14,000 and 15,000 on chromosome 20
107 -r chrX # only output call on chromosome X 110 -r chrX # only output call on chromosome X
108 111