comparison test-data/vcfprimers-test1.fasta @ 0:67a4da1a4df3 draft

Uploaded
author devteam
date Thu, 19 Mar 2015 14:43:10 -0400
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:67a4da1a4df3
1 >phiX174_1015_LEFT
2 ATTCA
3 >phiX174_1015_RIGHT
4 ACTGG
5 >phiX174_1016_LEFT
6 TTCAA
7 >phiX174_1016_RIGHT
8 CTGGC
9 >phiX174_1038_LEFT
10 GCCGC
11 >phiX174_1038_RIGHT
12 TGACC
13 >phiX174_1045_LEFT
14 GACCT
15 >phiX174_1045_RIGHT
16 TCCCA
17 >phiX174_1048_LEFT
18 CTTTC
19 >phiX174_1048_RIGHT
20 CATCT
21 >phiX174_1050_LEFT
22 TTCCC
23 >phiX174_1050_RIGHT
24 TCTTG
25 >phiX174_1051_LEFT
26 TCCCA
27 >phiX174_1051_RIGHT
28 CTTGG
29 >phiX174_1054_LEFT
30 CATCT
31 >phiX174_1054_RIGHT
32 GGCTT
33 >phiX174_1076_LEFT
34 AGATT
35 >phiX174_1076_RIGHT
36 GTCGT
37 >phiX174_1080_LEFT
38 TGGTC
39 >phiX174_1080_RIGHT
40 TCTTA
41 >phiX174_1092_LEFT
42 TACCA
43 >phiX174_1092_RIGHT
44 TTCAA
45 >phiX174_1093_LEFT
46 ACCAT
47 >phiX174_1093_RIGHT
48 TCAAC
49 >phiX174_1102_LEFT
50 ACTAC
51 >phiX174_1102_RIGHT
52 CCGGT
53 >phiX174_1107_LEFT
54 TCCGG
55 >phiX174_1107_RIGHT
56 TATCG
57 >phiX174_1110_LEFT
58 GGTTA
59 >phiX174_1110_RIGHT
60 CGCTG
61 >phiX174_1121_LEFT
62 GCGAC
63 >phiX174_1121_RIGHT
64 CCTTC
65 >phiX174_1124_LEFT
66 ACTCC
67 >phiX174_1124_RIGHT
68 TCGAG
69 >phiX174_1125_LEFT
70 CTCCT
71 >phiX174_1125_RIGHT
72 CGAGA
73 >phiX174_1131_LEFT
74 CGAGA
75 >phiX174_1131_RIGHT
76 GGACG
77 >phiX174_1141_LEFT
78 GCCGT
79 >phiX174_1141_RIGHT
80 GGCGC
81 >phiX174_1145_LEFT
82 TTGGC
83 >phiX174_1145_RIGHT
84 CTCTC
85 >phiX174_1147_LEFT
86 GGCGC
87 >phiX174_1147_RIGHT
88 CTCCG
89 >phiX174_1149_LEFT
90 CGCTC
91 >phiX174_1149_RIGHT
92 CCGTC
93 >phiX174_1156_LEFT
94 CGTCT
95 >phiX174_1156_RIGHT
96 TCTCC
97 >phiX174_1159_LEFT
98 CTTTC
99 >phiX174_1159_RIGHT
100 CCATT
101 >phiX174_1164_LEFT
102 TCCAT
103 >phiX174_1164_RIGHT
104 GCGTC
105 >phiX174_1168_LEFT
106 TTGCG
107 >phiX174_1168_RIGHT
108 CGTGG
109 >phiX174_1171_LEFT
110 CGTCG
111 >phiX174_1171_RIGHT
112 GGCCT
113 >phiX174_1174_LEFT
114 CGTGG
115 >phiX174_1174_RIGHT
116 CTTGC
117 >phiX174_1178_LEFT
118 GCCTT
119 >phiX174_1178_RIGHT
120 CTATT
121 >phiX174_1187_LEFT
122 TTGAC
123 >phiX174_1187_RIGHT
124 CTACT
125 >phiX174_1189_LEFT
126 GACTC
127 >phiX174_1189_RIGHT
128 ACTGT
129 >phiX174_1200_LEFT
130 AGACA
131 >phiX174_1200_RIGHT
132 TTTTA
133 >phiX174_1202_LEFT
134 ACATT
135 >phiX174_1202_RIGHT
136 TTACT
137 >phiX174_1205_LEFT
138 TTTTT
139 >phiX174_1205_RIGHT
140 CTTTT
141 >phiX174_1207_LEFT
142 TTTAC
143 >phiX174_1207_RIGHT
144 TTTTA
145 >phiX174_1214_LEFT
146 TTTAT
147 >phiX174_1214_RIGHT
148 TCCCT
149 >phiX174_1216_LEFT
150 TATGT
151 >phiX174_1216_RIGHT
152 CCTCA
153 >phiX174_1217_LEFT
154 ATGTC
155 >phiX174_1217_RIGHT
156 CTCAT
157 >phiX174_1219_LEFT
158 GTCCC
159 >phiX174_1219_RIGHT
160 CATCG
161 >phiX174_1223_LEFT
162 CTCAT
163 >phiX174_1223_RIGHT
164 GTCAC
165 >phiX174_1227_LEFT
166 TCGTC
167 >phiX174_1227_RIGHT
168 CGTTT
169 >phiX174_1232_LEFT
170 ACGTT
171 >phiX174_1232_RIGHT
172 ATGGT
173 >phiX174_1236_LEFT
174 TTATG
175 >phiX174_1236_RIGHT
176 TGAAC
177 >phiX174_1237_LEFT
178 TATGG
179 >phiX174_1237_RIGHT
180 GAACA
181 >phiX174_1240_LEFT
182 GGTGA
183 >phiX174_1240_RIGHT
184 CAGTG
185 >phiX174_1245_LEFT
186 ACAGT
187 >phiX174_1245_RIGHT
188 GATTA
189 >phiX174_1247_LEFT
190 AGTGG
191 >phiX174_1247_RIGHT
192 TTAAG
193 >phiX174_1250_LEFT
194 GGATT
195 >phiX174_1250_RIGHT
196 AGTTC
197 >phiX174_1251_LEFT
198 GATTA
199 >phiX174_1251_RIGHT
200 GTTCA
201 >phiX174_1253_LEFT
202 TTAAG
203 >phiX174_1253_RIGHT
204 TCATG
205 >phiX174_1257_LEFT
206 GTTCA
207 >phiX174_1257_RIGHT
208 GAAGG
209 >phiX174_1259_LEFT
210 TCATG
211 >phiX174_1259_RIGHT
212 AGGAT
213 >phiX174_1274_LEFT
214 TTAAT
215 >phiX174_1274_RIGHT
216 CCACT
217 >phiX174_1277_LEFT
218 ATGCC
219 >phiX174_1277_RIGHT
220 CTCCT
221 >phiX174_1279_LEFT
222 GCCAC
223 >phiX174_1279_RIGHT
224 CCTCT
225 >phiX174_1284_LEFT
226 TCCTC
227 >phiX174_1284_RIGHT
228 CCCGA
229 >phiX174_1289_LEFT
230 TCCCG
231 >phiX174_1289_RIGHT
232 CTGTT
233 >phiX174_1296_LEFT
234 TGTTA
235 >phiX174_1296_RIGHT
236 CACTA
237 >phiX174_1298_LEFT
238 TTAAC
239 >phiX174_1298_RIGHT
240 CTACT
241 >phiX174_1306_LEFT
242 ACTGG
243 >phiX174_1306_RIGHT
244 TATAT
245 >phiX174_1307_LEFT
246 CTGGT
247 >phiX174_1307_RIGHT
248 ATATT
249 >phiX174_1314_LEFT
250 TATTG
251 >phiX174_1314_RIGHT
252 CCATG
253 >phiX174_1317_LEFT
254 TGACC
255 >phiX174_1317_RIGHT
256 TGCCG
257 >phiX174_1320_LEFT
258 CCATG
259 >phiX174_1320_RIGHT
260 CGCTT
261 >phiX174_1322_LEFT
262 ATGCC
263 >phiX174_1322_RIGHT
264 CTTTT
265 >phiX174_1323_LEFT
266 TGCCG
267 >phiX174_1323_RIGHT
268 TTTTC
269 >phiX174_1329_LEFT
270 TTTTC
271 >phiX174_1329_RIGHT
272 TGGCA
273 >phiX174_1335_LEFT
274 TGGCA
275 >phiX174_1335_RIGHT
276 GATTA
277 >phiX174_1338_LEFT
278 CACGA
279 >phiX174_1338_RIGHT
280 TAACC
281 >phiX174_1345_LEFT
282 AACCC
283 >phiX174_1345_RIGHT
284 GATAC
285 >phiX174_1347_LEFT
286 CCCTG
287 >phiX174_1347_RIGHT
288 TACCA
289 >phiX174_1348_LEFT
290 CCTGA
291 >phiX174_1348_RIGHT
292 ACCAA
293 >phiX174_1352_LEFT
294 ATACC
295 >phiX174_1352_RIGHT
296 ATAAA
297 >phiX174_1354_LEFT
298 ACCAA
299 >phiX174_1354_RIGHT
300 AAAAT
301 >phiX174_1359_LEFT
302 TAAAA
303 >phiX174_1359_RIGHT
304 CCCTA
305 >phiX174_1366_LEFT
306 CCTAA
307 >phiX174_1366_RIGHT
308 CATTT
309 >phiX174_1370_LEFT
310 AGCAT
311 >phiX174_1370_RIGHT
312 TGTTT
313 >phiX174_1373_LEFT
314 ATTTG
315 >phiX174_1373_RIGHT
316 TTCAG
317 >phiX174_1380_LEFT
318 TCAGG
319 >phiX174_1380_RIGHT
320 TTATT
321 >phiX174_1381_LEFT
322 CAGGG
323 >phiX174_1381_RIGHT
324 TATTT
325 >phiX174_1384_LEFT
326 GGTTA
327 >phiX174_1384_RIGHT
328 TTGAA
329 >phiX174_1385_LEFT
330 GTTAT
331 >phiX174_1385_RIGHT
332 TGAAT
333 >phiX174_1391_LEFT
334 TGAAT
335 >phiX174_1391_RIGHT
336 TCTAT
337 >phiX174_1393_LEFT
338 AATAT
339 >phiX174_1393_RIGHT
340 TATAA
341 >phiX174_1396_LEFT
342 ATCTA
343 >phiX174_1396_RIGHT
344 AACAA
345 >phiX174_1397_LEFT
346 TCTAT
347 >phiX174_1397_RIGHT
348 ACAAC
349 >phiX174_1400_LEFT
350 ATAAC
351 >phiX174_1400_RIGHT
352 ACTAT
353 >phiX174_1401_LEFT
354 TAACA
355 >phiX174_1401_RIGHT
356 CTATT
357 >phiX174_1434_LEFT
358 CCGTA
359 >phiX174_1434_RIGHT
360 CGAGG
361 >phiX174_1438_LEFT
362 ACCGA
363 >phiX174_1438_RIGHT
364 GCTAA
365 >phiX174_1450_LEFT
366 CCTAA
367 >phiX174_1450_RIGHT
368 GAGCT
369 >phiX174_1459_LEFT
370 CTTAA
371 >phiX174_1459_RIGHT
372 CAAGA
373 >phiX174_1470_LEFT
374 TGATG
375 >phiX174_1470_RIGHT
376 TCGTT
377 >phiX174_1484_LEFT
378 GTTTC
379 >phiX174_1484_RIGHT
380 GTTGC
381 >phiX174_1487_LEFT
382 TCCGT
383 >phiX174_1487_RIGHT
384 GCTGC
385 >phiX174_1491_LEFT
386 TTGCT
387 >phiX174_1491_RIGHT
388 CCATC
389 >phiX174_1503_LEFT
390 CAAAA
391 >phiX174_1503_RIGHT
392 CATTT
393 >phiX174_1536_LEFT
394 GACTG
395 >phiX174_1536_RIGHT
396 GCTTT
397 >phiX174_1541_LEFT
398 AGCTT
399 >phiX174_1541_RIGHT
400 CTCGC
401 >phiX174_1553_LEFT
402 AAATG
403 >phiX174_1553_RIGHT
404 CGACT
405 >phiX174_1566_LEFT
406 TACCA
407 >phiX174_1566_RIGHT
408 ATCTA
409 >phiX174_1572_LEFT
410 ATCTA
411 >phiX174_1572_RIGHT
412 TGACA
413 >phiX174_1574_LEFT
414 CTATT
415 >phiX174_1574_RIGHT
416 ACATT
417 >phiX174_1575_LEFT
418 TATTG
419 >phiX174_1575_RIGHT
420 CATTA
421 >phiX174_1577_LEFT
422 TTGAC
423 >phiX174_1577_RIGHT
424 TTATG
425 >phiX174_1581_LEFT
426 CATTA
427 >phiX174_1581_RIGHT
428 GGGTC
429 >phiX174_1591_LEFT
430 CTGCA
431 >phiX174_1591_RIGHT
432 GCTGC
433 >phiX174_1597_LEFT
434 GCTGC
435 >phiX174_1597_RIGHT
436 TATGC
437 >phiX174_1603_LEFT
438 TATGC
439 >phiX174_1603_RIGHT
440 AATTT
441 >phiX174_1606_LEFT
442 GCTAA
443 >phiX174_1606_RIGHT
444 TTGCA
445 >phiX174_1611_LEFT
446 TTTGC
447 >phiX174_1611_RIGHT
448 TACTG
449 >phiX174_1613_LEFT
450 TGCAT
451 >phiX174_1613_RIGHT
452 CTGAC
453 >phiX174_1618_LEFT
454 ACTGA
455 >phiX174_1618_RIGHT
456 CAAGA
457 >phiX174_1619_LEFT
458 CTGAC
459 >phiX174_1619_RIGHT
460 AAGAA
461 >phiX174_1621_LEFT
462 GACCA
463 >phiX174_1621_RIGHT
464 GAACG
465 >phiX174_1622_LEFT
466 ACCAA
467 >phiX174_1622_RIGHT
468 AACGT
469 >phiX174_1624_LEFT
470 CAAGA
471 >phiX174_1624_RIGHT
472 CGTGA
473 >phiX174_1627_LEFT
474 GAACG
475 >phiX174_1627_RIGHT
476 GATTA
477 >phiX174_1630_LEFT
478 CGTGA
479 >phiX174_1630_RIGHT
480 TACTT
481 >phiX174_1632_LEFT
482 TGATT
483 >phiX174_1632_RIGHT
484 CTTCA
485 >phiX174_1634_LEFT
486 ATTAC
487 >phiX174_1634_RIGHT
488 TCATG
489 >phiX174_1635_LEFT
490 TTACT
491 >phiX174_1635_RIGHT
492 CATGC
493 >phiX174_1639_LEFT
494 TTCAT
495 >phiX174_1639_RIGHT
496 CAGCG
497 >phiX174_1645_LEFT
498 CAGCG
499 >phiX174_1645_RIGHT
500 TACCg
501 >phiX174_1647_LEFT
502 GCGTT
503 >phiX174_1647_RIGHT
504 CCgTG
505 >phiX174_1652_LEFT
506 ACCgT
507 >phiX174_1652_RIGHT
508 ATGTT
509 >phiX174_1656_LEFT
510 TGATG
511 >phiX174_1656_RIGHT
512 TATTT
513 >phiX174_1658_LEFT
514 ATGTT
515 >phiX174_1658_RIGHT
516 TTTCT
517 >phiX174_1659_LEFT
518 TGTTA
519 >phiX174_1659_RIGHT
520 TTCTT
521 >phiX174_1663_LEFT
522 ATTTC
523 >phiX174_1663_RIGHT
524 TCATT
525 >phiX174_1665_LEFT
526 TTCTT
527 >phiX174_1665_RIGHT
528 ATTTG
529 >phiX174_1670_LEFT
530 CATTT
531 >phiX174_1670_RIGHT
532 GAGGT
533 >phiX174_1671_LEFT
534 ATTTG
535 >phiX174_1671_RIGHT
536 AGGTA
537 >phiX174_1672_LEFT
538 TTTGG
539 >phiX174_1672_RIGHT
540 GGTAA
541 >phiX174_1673_LEFT
542 TTGGA
543 >phiX174_1673_RIGHT
544 GTAAA
545 >phiX174_1674_LEFT
546 TGGAG
547 >phiX174_1674_RIGHT
548 TAAAA
549 >phiX174_1677_LEFT
550 AGGTA
551 >phiX174_1677_RIGHT
552 AACCT
553 >phiX174_1678_LEFT
554 GGTAA
555 >phiX174_1678_RIGHT
556 ACCTC
557 >phiX174_1682_LEFT
558 AAACC
559 >phiX174_1682_RIGHT
560 CTTAT
561 >phiX174_1685_LEFT
562 CCTCT
563 >phiX174_1685_RIGHT
564 ATGAC
565 >phiX174_1686_LEFT
566 CTCTT
567 >phiX174_1686_RIGHT
568 TGACG
569 >phiX174_1687_LEFT
570 TCTTA
571 >phiX174_1687_RIGHT
572 GACGC
573 >phiX174_1688_LEFT
574 CTTAT
575 >phiX174_1688_RIGHT
576 ACGCT
577 >phiX174_1689_LEFT
578 TTATG
579 >phiX174_1689_RIGHT
580 CGCTG
581 >phiX174_1691_LEFT
582 ATGAC
583 >phiX174_1691_RIGHT
584 CTGAC
585 >phiX174_1693_LEFT
586 GACGC
587 >phiX174_1693_RIGHT
588 GACAA
589 >phiX174_1695_LEFT
590 CGCTG
591 >phiX174_1695_RIGHT
592 CAACC
593 >phiX174_1702_LEFT
594 AACCG
595 >phiX174_1702_RIGHT
596 CCTTT
597 >phiX174_1707_LEFT
598 TCCTT
599 >phiX174_1707_RIGHT
600 ACTTG
601 >phiX174_1708_LEFT
602 CCTTT
603 >phiX174_1708_RIGHT
604 CTTGT
605 >phiX174_1710_LEFT
606 TTTAC
607 >phiX174_1710_RIGHT
608 TGTCA
609 >phiX174_1723_LEFT
610 CGCTC
611 >phiX174_1723_RIGHT
612 AATCT
613 >phiX174_1724_LEFT
614 GCTCT
615 >phiX174_1724_RIGHT
616 ATCTC
617 >phiX174_1725_LEFT
618 CTCTA
619 >phiX174_1725_RIGHT
620 TCTCT
621 >phiX174_1726_LEFT
622 TCTAA
623 >phiX174_1726_RIGHT
624 CTCTG
625 >phiX174_1730_LEFT
626 ATCTC
627 >phiX174_1730_RIGHT
628 GGGCA
629 >phiX174_1739_LEFT
630 CATCT
631 >phiX174_1739_RIGHT
632 GCTAT
633 >phiX174_1746_LEFT
634 CTATG
635 >phiX174_1746_RIGHT
636 TGTTG
637 >phiX174_1749_LEFT
638 TGATG
639 >phiX174_1749_RIGHT
640 TGATG
641 >phiX174_1755_LEFT
642 TGATG
643 >phiX174_1755_RIGHT
644 AACTG
645 >phiX174_1756_LEFT
646 GATGG
647 >phiX174_1756_RIGHT
648 ACTGA
649 >phiX174_1761_LEFT
650 AACTG
651 >phiX174_1761_RIGHT
652 CCAAA
653 >phiX174_1764_LEFT
654 TGACC
655 >phiX174_1764_RIGHT
656 AACGT
657 >phiX174_1766_LEFT
658 ACCAA
659 >phiX174_1766_RIGHT
660 CGTCG
661 >phiX174_1769_LEFT
662 AAACG
663 >phiX174_1769_RIGHT
664 CGTTA
665 >phiX174_1771_LEFT
666 ACGTC
667 >phiX174_1771_RIGHT
668 TTAGG
669 >phiX174_1772_LEFT
670 CGTCG
671 >phiX174_1772_RIGHT
672 TAGGC
673 >phiX174_1774_LEFT
674 TCGTT
675 >phiX174_1774_RIGHT
676 GGCCA
677 >phiX174_1775_LEFT
678 CGTTA
679 >phiX174_1775_RIGHT
680 GCCAG
681 >phiX174_1776_LEFT
682 GTTAG
683 >phiX174_1776_RIGHT
684 CCAGT
685 >phiX174_1778_LEFT
686 TAGGC
687 >phiX174_1778_RIGHT
688 AGTTT
689 >phiX174_1779_LEFT
690 AGGCC
691 >phiX174_1779_RIGHT
692 GTTTT
693 >phiX174_1781_LEFT
694 GCCAG
695 >phiX174_1781_RIGHT
696 TTTCT
697 >phiX174_1782_LEFT
698 CCAGT
699 >phiX174_1782_RIGHT
700 TTCTG
701 >phiX174_1783_LEFT
702 CAGTT
703 >phiX174_1783_RIGHT
704 TCTGG
705 >phiX174_1788_LEFT
706 TTCTG
707 >phiX174_1788_RIGHT
708 TCGTG
709 >phiX174_1792_LEFT
710 GGTCG
711 >phiX174_1792_RIGHT
712 GTTCA
713 >phiX174_1802_LEFT
714 AACAG
715 >phiX174_1802_RIGHT
716 CCTAT
717 >phiX174_1804_LEFT
718 CAGAC
719 >phiX174_1804_RIGHT
720 TATAA
721 >phiX174_1805_LEFT
722 AGACC
723 >phiX174_1805_RIGHT
724 ATAAA
725 >phiX174_1806_LEFT
726 GACCT
727 >phiX174_1806_RIGHT
728 TAAAC
729 >phiX174_1824_LEFT
730 GCCGC
731 >phiX174_1824_RIGHT
732 TTTCT
733 >phiX174_1825_LEFT
734 CCGCG
735 >phiX174_1825_RIGHT
736 TTCTT
737 >phiX174_1833_LEFT
738 CTTTG
739 >phiX174_1833_RIGHT
740 TCCTG
741 >phiX174_1843_LEFT
742 GAGCA
743 >phiX174_1843_RIGHT
744 GGCAC
745 >phiX174_1847_LEFT
746 ATGGC
747 >phiX174_1847_RIGHT
748 CTATG
749 >phiX174_1854_LEFT
750 TATGT
751 >phiX174_1854_RIGHT
752 TACTC
753 >phiX174_1860_LEFT
754 TACTC
755 >phiX174_1860_RIGHT
756 TGCGC
757 >phiX174_1863_LEFT
758 TCTTG
759 >phiX174_1863_RIGHT
760 GCTTG
761 >phiX174_1866_LEFT
762 TGCGC
763 >phiX174_1866_RIGHT
764 TGTTC
765 >phiX174_1875_LEFT
766 TCGTT
767 >phiX174_1875_RIGHT
768 TCCGC
769 >phiX174_1876_LEFT
770 CGTTT
771 >phiX174_1876_RIGHT
772 CCGCC
773 >phiX174_1882_LEFT
774 CCGCC
775 >phiX174_1882_RIGHT
776 ACTGC
777 >phiX174_1889_LEFT
778 CTGCG
779 >phiX174_1889_RIGHT
780 CTAAA
781 >phiX174_1913_LEFT
782 TTAAC
783 >phiX174_1913_RIGHT
784 CTAAA
785 >phiX174_1915_LEFT
786 AACGC
787 >phiX174_1915_RIGHT
788 AAAGG
789 >phiX174_1917_LEFT
790 CGCTA
791 >phiX174_1917_RIGHT
792 AGGTG
793 >phiX174_1930_LEFT
794 TTGAC
795 >phiX174_1930_RIGHT
796 TATAC
797 >phiX174_1934_LEFT
798 CTTAT
799 >phiX174_1934_RIGHT
800 CCGAT
801 >phiX174_1940_LEFT
802 CCGAT
803 >phiX174_1940_RIGHT
804 TTGCT
805 >phiX174_1942_LEFT
806 GATAT
807 >phiX174_1942_RIGHT
808 GCTGG
809 >phiX174_1945_LEFT
810 ATTGC
811 >phiX174_1945_RIGHT
812 GGCGA
813 >phiX174_1954_LEFT
814 GACCC
815 >phiX174_1954_RIGHT
816 GTTTT
817 >phiX174_1959_LEFT
818 TGTTT
819 >phiX174_1959_RIGHT
820 GTATG
821 >phiX174_1994_LEFT
822 CTATG
823 >phiX174_1994_RIGHT
824 AGGAT
825 >phiX174_1998_LEFT
826 GAAGG
827 >phiX174_1998_RIGHT
828 TGTTT