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comparison vcfrandomsample.xml @ 3:6257ee3b50d3 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/vcflib/vcfrandomsample commit 36e9065027cc7bf721e9d203208477ee88906c57"
author iuc
date Thu, 23 Jan 2020 08:10:16 -0500
parents 12b570dd0bc5
children
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2:12b570dd0bc5 3:6257ee3b50d3
6 <expand macro="requirements"/> 6 <expand macro="requirements"/>
7 <expand macro="stdio" /> 7 <expand macro="stdio" />
8 <command> 8 <command>
9 vcfrandomsample 9 vcfrandomsample
10 #if $adv_options.adv_options_selector == "use_adv_controls": 10 #if $adv_options.adv_options_selector == "use_adv_controls":
11 -s "${adv_options.scale_by}" 11 -s '${adv_options.scale_by}'
12 #end if 12 #end if
13 -p ${random_seed} 13 -p ${random_seed}
14 -r ${rate} 14 -r ${rate}
15 "${vcf_input}" > "${out_file1}" 15 '${vcf_input}' > '${out_file1}'
16 </command> 16 </command>
17 <inputs> 17 <inputs>
18 <param format="vcf" name="vcf_input" type="data" label="Select random sites from"/> 18 <param format="vcf" name="vcf_input" type="data" label="Select random sites from"/>
19 <param name="rate" type="float" value="0.1" label="base sampling probability per locus" help="-r, --rate"/> 19 <param name="rate" type="float" value="0.1" label="base sampling probability per locus" help="-r, --rate"/>
20 <param name="random_seed" type="integer" value="17823618326" label="use this random seed" 20 <param name="random_seed" type="integer" value="17823618326" label="use this random seed"