Mercurial > repos > dfornika > data_manager_build_kraken2_database

comparison data_manager/kraken2_build_minikraken.py @ 15:9385ea32f9ac draft

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planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_kraken2_database/ commit 70494d589aa1990618ebc7a895e91477d41c3203-dirty
author dfornika
date Tue, 05 Mar 2019 15:56:43 -0500
parents 1f55643715e1
children d9f190088154
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14:512c57d5d277 15:9385ea32f9ac
47 47
48 run(['wget'] + args, target_directory) 48 run(['wget'] + args, target_directory)
49 49
50 args = [ 50 args = [
51 '-xvzf', 51 '-xvzf',
52 'minikraken2_' + minikraken2_version + '_8GB.tgz' 52 'minikraken2_' + minikraken2_version + '_8GB.tgz',
53 '-C', 53 '-C',
54 database_path, 54 database_path,
55 ] 55 ]
56 56
57 run(['tar'] + args, target_directory) 57 run(['tar'] + args, target_directory)