Mercurial > repos > dfornika > kraken2
view macros.xml @ 11:da1a2d98dab1 draft
planemo upload for repository https://github.com/dfornika/galaxytools/blob/master/tools/kraken2 commit 593a4002db3f2513974809a94db514c05fa589f6-dirty
author | dfornika |
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date | Mon, 04 Mar 2019 17:29:41 -0500 |
parents | a74785cdf5e3 |
children | 269ea4b78bbb |
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<macros> <token name="@TOOL_VERSION@">2.0.7_beta</token> <token name="@INTYPES@"> fasta,fasta.gz,fastq,fastq.gz,fastqsanger,fastqsanger.gz </token> <xml name="input_database"> <param label="Select a Kraken2 database" name="kraken2_database" type="select"> <options from_data_table="kraken2_databases"> <validator message="No Kraken2 database is available" type="no_options" /> </options> </param> </xml> <xml name="citations"> <citations> <citation type="doi">10.1186/gb-2014-15-3-r46</citation> </citations> </xml> <token name="@SET_DATABASE_PATH@">export KRAKEN2_DB_PATH='${kraken2_database.fields.path}'</token> </macros>