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author dfornika
date Tue, 26 Jun 2018 15:33:59 -0400
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1 <tool id="mentalist_distance" name="MentaLiST Distance Matrix" version="0.1.9">
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2 <requirements>
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3 <requirement type="package" version="3.4.1">r-base</requirement>
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4 </requirements>
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5 <command detect_errors="exit_code"><![CDATA[
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6 $__tool_directory__/mentalist_distance
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7 '${input}'
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8 > '${output}'
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9 ]]></command>
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10 <inputs>
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11 <param name="input" type="data" format="tabular" label="MentaLiST Calls" help=""/>
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12 </inputs>
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13 <outputs>
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14 <data name="output" format="tabular"/>
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15 </outputs>
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16 <tests>
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17 <test>
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18 <param name="input" value="mentalist_distance/small_input_00.tsv" />
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19 <output name="output" file="mentalist_distance/small_output_00.tsv" />
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20 </test>
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21 <test>
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22 <param name="input" value="mentalist_distance/med_input_00.tsv" />
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23 <output name="output" file="mentalist_distance/med_output_00.tsv" />
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24 </test>
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25 <test>
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26 <param name="input" value="mentalist_distance/large_input_00.tsv" />
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27 <output name="output" file="mentalist_distance/large_output_00.tsv" />
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28 </test>
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29 </tests>
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30 <help><![CDATA[
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31 mentalist_distance <input.tsv>
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32 ]]></help>
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33 <citations>
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34 </citations>
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35 </tool>