Mercurial > repos > diego > rtg_investigator

diff tools/rtg/cg2sdf.xml @ 1:8593828f91e7 default tip

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Full galaxy wrapper
author diego
date Sat, 21 Apr 2012 21:36:15 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tools/rtg/cg2sdf.xml	Sat Apr 21 21:36:15 2012 -0400
@@ -0,0 +1,17 @@
+<tool id="rtg_cg2sdf" name="Format CG TSV">
+  <description>to SDF with rtg cg2sdf</description>
+  <command interpreter="bash">galaxy-rtg-wrapper.sh cg2sdf 
+$input1
+-o ${output.extra_files_path} >$output</command>
+  <inputs>
+        <param name="input1" type="data" format="tsvcg" label="Source CG TSV file" help=""/>
+  </inputs>
+  <outputs>
+    <data format="rtg_sdf" name="output" />
+  </outputs>
+
+  <help>
+This tool formats a CG TSV file to RTG SDF.
+  </help>
+
+</tool>