Mercurial > repos > drosofff > fetch_fasta_from_ncbi

diff retrieve_fasta_from_NCBI.py @ 3:a9d8f69d59fb draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/fetch_fasta_from_ncbi commit b6de14061c479f0418cd89e26d6f5ac26e565a07
author drosofff
date Wed, 09 Nov 2016 11:27:31 -0500
parents 79cb7620843d
children 64f45c5e94a0
line wrap: on
line diff
--- a/retrieve_fasta_from_NCBI.py	Tue Jan 05 10:06:42 2016 -0500
+++ b/retrieve_fasta_from_NCBI.py	Wed Nov 09 11:27:31 2016 -0500
@@ -32,11 +32,13 @@
 import urllib2
 import httplib
 import re
+
+
 class Eutils:
 
     def __init__(self, options, logger):
         self.logger = logger
-        self.base = "http://eutils.ncbi.nlm.nih.gov/entrez/eutils/"
+        self.base = "https://eutils.ncbi.nlm.nih.gov/entrez/eutils/"
         self.query_string = options.query_string
         self.dbname = options.dbname
         if options.outname: