Mercurial > repos > drosofff > metavisitor_workflows

diff Galaxy-Workflow-Metavisitor__Workflow_for_Use_Case_3-1.ga @ 3:ba15c770fd40 draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/workflows commit 9e3f79e20670526453bbed9f5b028aabb1bb7ae4
author drosofff
date Thu, 17 Nov 2016 07:27:04 -0500
parents 48b020a0d2f7
children 46614c7dd247
line wrap: on
line diff
--- a/Galaxy-Workflow-Metavisitor__Workflow_for_Use_Case_3-1.ga	Fri May 13 05:46:40 2016 -0400
+++ b/Galaxy-Workflow-Metavisitor__Workflow_for_Use_Case_3-1.ga	Thu Nov 17 07:27:04 2016 -0500
@@ -261,7 +261,7 @@
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             "annotation": "", 
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             "id": 6, 
             "input_connections": {
                 "input": {
@@ -313,22 +313,22 @@
                 }
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             "tool_errors": null, 
-            "tool_id": "toolshed.g2.bx.psu.edu/repos/drosofff/msp_sr_bowtie/bowtieForSmallRNA/1.1.2", 
+            "tool_id": "toolshed.g2.bx.psu.edu/repos/drosofff/msp_sr_bowtie/bowtieForSmallRNA/1.1.2.1", 
             "tool_shed_repository": {
-                "changeset_revision": "c1bfa227bbb6", 
+                "changeset_revision": "615d2550977f", 
                 "name": "msp_sr_bowtie", 
                 "owner": "drosofff", 
                 "tool_shed": "toolshed.g2.bx.psu.edu"
             }, 
             "tool_state": "{\"__page__\": 0, \"output_format\": \"\\\"tabular\\\"\", \"additional_fasta\": \"\\\"unal\\\"\", \"v_mismatches\": \"\\\"2\\\"\", \"__rerun_remap_job_id__\": null, \"input\": \"null\", \"refGenomeSource\": \"{\\\"genomeSource\\\": \\\"indexed\\\", \\\"index\\\": \\\"hg19\\\", \\\"__current_case__\\\": 0}\", \"method\": \"\\\"k_option\\\"\"}", 
-            "tool_version": "1.1.2", 
+            "tool_version": "1.1.2.1", 
             "type": "tool", 
             "uuid": "41108f94-dbf9-4cbe-8bd4-acdc16c9c06c", 
             "workflow_outputs": []
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             "annotation": "", 
-            "content_id": "toolshed.g2.bx.psu.edu/repos/drosofff/msp_sr_bowtie/bowtieForSmallRNA/1.1.2", 
+            "content_id": "toolshed.g2.bx.psu.edu/repos/drosofff/msp_sr_bowtie/bowtieForSmallRNA/1.1.2.1", 
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@@ -380,22 +380,22 @@
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-            "tool_id": "toolshed.g2.bx.psu.edu/repos/drosofff/msp_sr_bowtie/bowtieForSmallRNA/1.1.2", 
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             "tool_shed_repository": {
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+                "changeset_revision": "615d2550977f", 
                 "name": "msp_sr_bowtie", 
                 "owner": "drosofff", 
                 "tool_shed": "toolshed.g2.bx.psu.edu"
             }, 
             "tool_state": "{\"__page__\": 0, \"output_format\": \"\\\"tabular\\\"\", \"additional_fasta\": \"\\\"al\\\"\", \"v_mismatches\": \"\\\"2\\\"\", \"__rerun_remap_job_id__\": null, \"input\": \"null\", \"refGenomeSource\": \"{\\\"genomeSource\\\": \\\"indexed\\\", \\\"index\\\": \\\"vir1\\\", \\\"__current_case__\\\": 0}\", \"method\": \"\\\"k_option\\\"\"}", 
-            "tool_version": "1.1.2", 
+            "tool_version": "1.1.2.1", 
             "type": "tool", 
             "uuid": "3d252e09-bbcc-45d3-9878-32e4fd8a43e5", 
             "workflow_outputs": []
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         "8": {
             "annotation": "", 
-            "content_id": "toolshed.g2.bx.psu.edu/repos/drosofff/msp_oases/oasesoptimiserv/1.1.4", 
+            "content_id": "toolshed.g2.bx.psu.edu/repos/drosofff/msp_oases/oasesoptimiserv/1.1.5", 
             "id": 8, 
             "input_connections": {
                 "inputs_0|input": {
@@ -426,15 +426,15 @@
                 }
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             "tool_errors": null, 
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+            "tool_id": "toolshed.g2.bx.psu.edu/repos/drosofff/msp_oases/oasesoptimiserv/1.1.5", 
             "tool_shed_repository": {
-                "changeset_revision": "f08d9c814ffb", 
+                "changeset_revision": "dc684e37f668", 
                 "name": "msp_oases", 
                 "owner": "drosofff", 
                 "tool_shed": "toolshed.g2.bx.psu.edu"
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             "tool_state": "{\"__page__\": 0, \"inputs\": \"[{\\\"__index__\\\": 0, \\\"input\\\": null}]\", \"end_hash_length\": \"\\\"27\\\"\", \"__rerun_remap_job_id__\": null, \"start_hash_length\": \"\\\"11\\\"\"}", 
-            "tool_version": "1.1.4", 
+            "tool_version": "1.1.5", 
             "type": "tool", 
             "uuid": "b73a2fa1-bf72-4ad3-b82c-e342a21a5275", 
             "workflow_outputs": [
@@ -447,7 +447,7 @@
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+            "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.1.08", 
             "id": 9, 
             "input_connections": {
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@@ -482,15 +482,15 @@
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             "tool_shed_repository": {
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+                "changeset_revision": "3034ce97dd33", 
                 "name": "ncbi_blast_plus", 
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             "uuid": "0e8b01bc-d919-4bc4-ba28-c2fde37de6b6", 
             "workflow_outputs": [