Mercurial > repos > drosofff > msp_blastparser_and_hits
diff BlastParser_and_hits.xml @ 3:8f5d48294f70 draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/msp_blastparser_and_hits commit 3d9ddd0f6f3c3b97a3bebf52646731ad6771e178
| author | drosofff |
|---|---|
| date | Mon, 19 Oct 2015 12:13:12 -0400 |
| parents | bb0d4cd765c5 |
| children | 60b6bd959929 |
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--- a/BlastParser_and_hits.xml Tue Sep 29 06:32:31 2015 -0400 +++ b/BlastParser_and_hits.xml Mon Oct 19 12:13:12 2015 -0400 @@ -1,4 +1,4 @@ -<tool id="BlastParser_and_hits" name="Parse blast output and compile hits" version="2.3.1"> +<tool id="BlastParser_and_hits" name="Parse blast output and compile hits" version="2.3.2"> <description>for virus discovery</description> <requirements></requirements> <command interpreter="python"> @@ -23,9 +23,9 @@ <param name="sequences" type="data" format="fasta" label="fasta sequences that have been blasted" /> <param name="blast" type="data" format="tabular" label="The blast output you wish to parse" /> <param name="flanking" type="text" size="5" value= "5" label="Number of flanking nucleotides to add to hits for CAP3 assembly"/> - <param name="mode" type="select" label="Verbose or short reporting mode" help="display or not the oases contigs"> - <option value="verbose" default="true">verbose</option> - <option value="short">do not report oases contigs</option> + <param name="mode" type="select" label="Extensive or compact reporting mode" help="display (extensive) or not (compact) the oases contigs"> + <option value="verbose" default="true">extensive</option> + <option value="short">compact</option> </param> <conditional name="additional_filters"> <param name="use_filters" type="select" label="Use Additional Filters?">