Mercurial > repos > drosofff > msp_blastparser_and_hits

changeset 3:8f5d48294f70 draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/msp_blastparser_and_hits commit 3d9ddd0f6f3c3b97a3bebf52646731ad6771e178
author drosofff
date Mon, 19 Oct 2015 12:13:12 -0400
parents bb0d4cd765c5
children 60b6bd959929
files BlastParser_and_hits.py BlastParser_and_hits.xml test-data/output.tab
diffstat 3 files changed, 167 insertions(+), 167 deletions(-) [+]
line wrap: on
line diff
--- a/BlastParser_and_hits.py	Tue Sep 29 06:32:31 2015 -0400
+++ b/BlastParser_and_hits.py	Mon Oct 19 12:13:12 2015 -0400
@@ -15,8 +15,8 @@
     the_parser.add_argument('--flanking', action="store", type=int, help="number of flanking nucleotides added to the hit sequences") 
     the_parser.add_argument('--mode', action="store", choices=["verbose", "short"], type=str, help="reporting (verbose) or not reporting (short) oases contigs")
     the_parser.add_argument('--filter_relativeCov', action="store", type=float, default=0, help="filter out relative coverages below the specified ratio (float number)")
-    the_parser.add_argument('--filter_maxScore', action="store", type=float, default=0, help="filter out maximum BitScore below the specified float number")
-    the_parser.add_argument('--filter_meanScore', action="store", type=float, default=0, help="filter out maximum BitScore below the specified float number")
+    the_parser.add_argument('--filter_maxScore', action="store", type=float, default=0, help="filter out best BitScores below the specified float number")
+    the_parser.add_argument('--filter_meanScore', action="store", type=float, default=0, help="filter out mean BitScores below the specified float number")
     the_parser.add_argument('--al_sequences', action="store", type=str, help="sequences that have been blast aligned")
     the_parser.add_argument('--un_sequences', action="store", type=str, help="sequences that have not been blast aligned")
     args = the_parser.parse_args()
@@ -146,7 +146,7 @@
             print >> F, "# Suject Length: %s" % (results[subject]["subjectLength"])
             print >> F, "# Total Subject Coverage: %s" % (results[subject]["TotalCoverage"])
             print >> F, "# Relative Subject Coverage: %s" % (results[subject]["RelativeSubjectCoverage"])
-            print >> F, "# Maximum Bit Score: %s" % (results[subject]["maxBitScores"])
+            print >> F, "# Best Bit Score: %s" % (results[subject]["maxBitScores"])
             print >> F, "# Mean Bit Score: %s" % (results[subject]["meanBitScores"])
             for header in results[subject]["HitDic"]:
                 print >> Fasta, ">%s\n%s" % (header, insert_newlines(results[subject]["HitDic"][header]) )
@@ -161,7 +161,7 @@
                     info = "\t".join(info)
                     print >> F, info
     else:
-        print >>F, "# subject\tsubject length\tTotal Subject Coverage\tRelative Subject Coverage\tMaximum Bit Score\tMean Bit Score"
+        print >>F, "# subject\tsubject length\tTotal Subject Coverage\tRelative Subject Coverage\tBest Bit Score\tMean Bit Score"
         for subject in sorted (results, key=lambda x: results[x]["meanBitScores"], reverse=True):
             if results[subject]["RelativeSubjectCoverage"]<filter_relativeCov or results[subject]["maxBitScores"]<filter_maxScore or results[subject]["meanBitScores"]<filter_meanScore:
                 continue
--- a/BlastParser_and_hits.xml	Tue Sep 29 06:32:31 2015 -0400
+++ b/BlastParser_and_hits.xml	Mon Oct 19 12:13:12 2015 -0400
@@ -1,4 +1,4 @@
-<tool id="BlastParser_and_hits" name="Parse blast output and compile hits" version="2.3.1">
+<tool id="BlastParser_and_hits" name="Parse blast output and compile hits" version="2.3.2">
 <description>for virus discovery</description>
 <requirements></requirements>
 <command interpreter="python">
@@ -23,9 +23,9 @@
 	<param name="sequences" type="data" format="fasta"  label="fasta sequences that have been blasted" />
 	<param name="blast" type="data" format="tabular" label="The blast output you wish to parse" />
 	<param name="flanking" type="text" size="5" value= "5" label="Number of flanking nucleotides to add to hits for CAP3 assembly"/>
-	<param name="mode" type="select" label="Verbose or short reporting mode" help="display or not the oases contigs">
-	    <option value="verbose" default="true">verbose</option>
-	    <option value="short">do not report oases contigs</option>
+	<param name="mode" type="select" label="Extensive or compact  reporting mode" help="display (extensive)  or not (compact) the oases contigs">
+	    <option value="verbose" default="true">extensive</option>
+	    <option value="short">compact</option>
 	</param>
     <conditional name="additional_filters">
             <param name="use_filters" type="select" label="Use Additional Filters?">
--- a/test-data/output.tab	Tue Sep 29 06:32:31 2015 -0400
+++ b/test-data/output.tab	Mon Oct 19 12:13:12 2015 -0400
@@ -5,7 +5,7 @@
 # Suject Length: 3005
 # Total Subject Coverage: 3001
 # Relative Subject Coverage: 0.998668885191
-# Maximum Bit Score: 5413.0
+# Best Bit Score: 5413.0
 # Mean Bit Score: 3241.5
 Locus_42_Transcript_2/2_Confidence_0.333_Length_597	100.0	593	2409	3001	99.2	0.0	1070.0
 Locus_42_Transcript_1/2_Confidence_0.333_Length_3138	100.0	3001	1	3001	95.6	0.0	5413.0
@@ -14,7 +14,7 @@
 # Suject Length: 6780
 # Total Subject Coverage: 6765
 # Relative Subject Coverage: 0.997787610619
-# Maximum Bit Score: 8001.0
+# Best Bit Score: 8001.0
 # Mean Bit Score: 2184.97272727
 Locus_10_Transcript_7/8_Confidence_0.111_Length_255	100.0	26	6549	6524	9.8	0.001	48.2
 Locus_7_Transcript_10/11_Confidence_0.154_Length_4093	99.66	4093	542	4628	100.0	0.0	7319.0
@@ -43,7 +43,7 @@
 # Suject Length: 6780
 # Total Subject Coverage: 6765
 # Relative Subject Coverage: 0.997787610619
-# Maximum Bit Score: 8001.0
+# Best Bit Score: 8001.0
 # Mean Bit Score: 2184.97272727
 Locus_10_Transcript_7/8_Confidence_0.111_Length_255	100.0	26	6549	6524	9.8	0.001	48.2
 Locus_7_Transcript_10/11_Confidence_0.154_Length_4093	99.66	4093	542	4628	100.0	0.0	7319.0
@@ -72,7 +72,7 @@
 # Suject Length: 4806
 # Total Subject Coverage: 4708
 # Relative Subject Coverage: 0.979608822305
-# Maximum Bit Score: 5317.0
+# Best Bit Score: 5317.0
 # Mean Bit Score: 1797.4
 Locus_63_Transcript_1/1_Confidence_0.000_Length_371	95.96	371	3781	3411	99.7	3e-170	601.0
 Locus_42_Transcript_2/2_Confidence_0.333_Length_597	97.81	594	2761	3354	99.3	0.0	1012.0
@@ -84,7 +84,7 @@
 # Suject Length: 4806
 # Total Subject Coverage: 4708
 # Relative Subject Coverage: 0.979608822305
-# Maximum Bit Score: 5317.0
+# Best Bit Score: 5317.0
 # Mean Bit Score: 1797.4
 Locus_63_Transcript_1/1_Confidence_0.000_Length_371	95.96	371	3781	3411	99.7	3e-170	601.0
 Locus_42_Transcript_2/2_Confidence_0.333_Length_597	97.81	594	2761	3354	99.3	0.0	1012.0
@@ -96,7 +96,7 @@
 # Suject Length: 3014
 # Total Subject Coverage: 3004
 # Relative Subject Coverage: 0.996682149967
-# Maximum Bit Score: 2296.0
+# Best Bit Score: 2296.0
 # Mean Bit Score: 1733.0
 Locus_21_Transcript_1/1_Confidence_0.000_Length_919	100.0	919	813	1731	99.9	0.0	1658.0
 Locus_12_Transcript_1/1_Confidence_0.000_Length_1279	100.0	1273	3014	1742	99.5	0.0	2296.0
@@ -107,7 +107,7 @@
 # Suject Length: 3260
 # Total Subject Coverage: 3150
 # Relative Subject Coverage: 0.966257668712
-# Maximum Bit Score: 3952.0
+# Best Bit Score: 3952.0
 # Mean Bit Score: 1617.5
 Locus_15_Transcript_1/1_Confidence_0.000_Length_436	100.0	436	35	470	99.8	0.0	787.0
 Locus_9_Transcript_2/3_Confidence_0.333_Length_2216	99.59	2217	972	3186	100.0	0.0	3952.0
@@ -120,7 +120,7 @@
 # Suject Length: 3243
 # Total Subject Coverage: 3016
 # Relative Subject Coverage: 0.930003083565
-# Maximum Bit Score: 1734.0
+# Best Bit Score: 1734.0
 # Mean Bit Score: 1205.8
 Locus_17_Transcript_3/3_Confidence_0.200_Length_456	98.9	456	1652	2107	99.8	0.0	800.0
 Locus_43_Transcript_1/1_Confidence_0.000_Length_1002	98.4	1003	2189	3191	99.9	0.0	1734.0
@@ -132,7 +132,7 @@
 # Suject Length: 3243
 # Total Subject Coverage: 3016
 # Relative Subject Coverage: 0.930003083565
-# Maximum Bit Score: 1734.0
+# Best Bit Score: 1734.0
 # Mean Bit Score: 1205.8
 Locus_17_Transcript_3/3_Confidence_0.200_Length_456	98.9	456	1652	2107	99.8	0.0	800.0
 Locus_43_Transcript_1/1_Confidence_0.000_Length_1002	98.4	1003	2189	3191	99.9	0.0	1734.0
@@ -144,7 +144,7 @@
 # Suject Length: 3360
 # Total Subject Coverage: 2526
 # Relative Subject Coverage: 0.751785714286
-# Maximum Bit Score: 978.0
+# Best Bit Score: 978.0
 # Mean Bit Score: 445.75
 Locus_69_Transcript_1/1_Confidence_0.000_Length_164	99.39	164	546	383	99.4	3e-77	291.0
 Locus_62_Transcript_1/1_Confidence_0.000_Length_130	98.46	130	1733	1862	99.2	8e-58	226.0
@@ -163,7 +163,7 @@
 # Suject Length: 3360
 # Total Subject Coverage: 2526
 # Relative Subject Coverage: 0.751785714286
-# Maximum Bit Score: 978.0
+# Best Bit Score: 978.0
 # Mean Bit Score: 445.75
 Locus_69_Transcript_1/1_Confidence_0.000_Length_164	99.39	164	546	383	99.4	3e-77	291.0
 Locus_62_Transcript_1/1_Confidence_0.000_Length_130	98.46	130	1733	1862	99.2	8e-58	226.0
@@ -182,7 +182,7 @@
 # Suject Length: 4743
 # Total Subject Coverage: 779
 # Relative Subject Coverage: 0.164242040902
-# Maximum Bit Score: 682.0
+# Best Bit Score: 682.0
 # Mean Bit Score: 390.742857143
 Locus_2_Transcript_4/5_Confidence_0.125_Length_605	85.4	596	184	779	98.3	0.0	682.0
 Locus_2_Transcript_5/5_Confidence_0.000_Length_447	82.99	435	345	779	97.1	4e-125	452.0
@@ -196,7 +196,7 @@
 # Suject Length: 3107
 # Total Subject Coverage: 2360
 # Relative Subject Coverage: 0.759575152881
-# Maximum Bit Score: 901.0
+# Best Bit Score: 901.0
 # Mean Bit Score: 281.591666667
 Locus_46_Transcript_1/1_Confidence_0.667_Length_178	98.31	178	2875	3052	99.4	4e-82	307.0
 Locus_72_Transcript_1/1_Confidence_0.000_Length_108	100.0	108	1903	1796	99.1	1e-48	196.0
@@ -227,7 +227,7 @@
 # Suject Length: 3107
 # Total Subject Coverage: 2359
 # Relative Subject Coverage: 0.759253299002
-# Maximum Bit Score: 856.0
+# Best Bit Score: 856.0
 # Mean Bit Score: 280.434782609
 Locus_46_Transcript_1/1_Confidence_0.667_Length_178	97.19	178	2875	3052	99.4	2e-79	298.0
 Locus_72_Transcript_1/1_Confidence_0.000_Length_108	99.07	108	1903	1796	99.1	4e-47	190.0
@@ -257,7 +257,7 @@
 # Suject Length: 3220
 # Total Subject Coverage: 2384
 # Relative Subject Coverage: 0.740372670807
-# Maximum Bit Score: 482.0
+# Best Bit Score: 482.0
 # Mean Bit Score: 269.6
 Locus_17_Transcript_3/3_Confidence_0.200_Length_456	73.2	459	1637	2091	99.6	4e-68	262.0
 Locus_43_Transcript_1/1_Confidence_0.000_Length_1002	70.31	458	2732	3183	44.4	2e-45	188.0
@@ -269,7 +269,7 @@
 # Suject Length: 3220
 # Total Subject Coverage: 2390
 # Relative Subject Coverage: 0.742236024845
-# Maximum Bit Score: 457.0
+# Best Bit Score: 457.0
 # Mean Bit Score: 268.4
 Locus_17_Transcript_3/3_Confidence_0.200_Length_456	72.83	460	1642	2097	99.8	2e-67	260.0
 Locus_43_Transcript_1/1_Confidence_0.000_Length_1002	70.9	457	2738	3189	44.4	8e-50	203.0
@@ -281,7 +281,7 @@
 # Suject Length: 3103
 # Total Subject Coverage: 2337
 # Relative Subject Coverage: 0.753142120529
-# Maximum Bit Score: 457.0
+# Best Bit Score: 457.0
 # Mean Bit Score: 262.6
 Locus_17_Transcript_3/3_Confidence_0.200_Length_456	72.83	460	1600	2055	99.8	2e-67	260.0
 Locus_43_Transcript_1/1_Confidence_0.000_Length_1002	70.3	404	2696	3094	39.3	4e-41	174.0
@@ -293,7 +293,7 @@
 # Suject Length: 3107
 # Total Subject Coverage: 2355
 # Relative Subject Coverage: 0.757965883489
-# Maximum Bit Score: 756.0
+# Best Bit Score: 756.0
 # Mean Bit Score: 262.104347826
 Locus_46_Transcript_1/1_Confidence_0.667_Length_178	96.63	178	2875	3052	99.4	3e-78	295.0
 Locus_72_Transcript_1/1_Confidence_0.000_Length_108	93.52	108	1903	1796	99.1	6e-39	163.0
@@ -323,7 +323,7 @@
 # Suject Length: 1416
 # Total Subject Coverage: 1133
 # Relative Subject Coverage: 0.800141242938
-# Maximum Bit Score: 809.0
+# Best Bit Score: 809.0
 # Mean Bit Score: 259.0
 Locus_1_Transcript_1/7_Confidence_0.231_Length_224	98.47	196	517	712	87.1	9e-92	340.0
 Locus_56_Transcript_1/1_Confidence_0.000_Length_450	100.0	448	1231	784	99.3	0.0	809.0
@@ -343,7 +343,7 @@
 # Suject Length: 1383
 # Total Subject Coverage: 1035
 # Relative Subject Coverage: 0.748373101952
-# Maximum Bit Score: 740.0
+# Best Bit Score: 740.0
 # Mean Bit Score: 252.890909091
 Locus_1_Transcript_1/7_Confidence_0.231_Length_224	94.39	196	518	713	87.1	7e-81	304.0
 Locus_56_Transcript_1/1_Confidence_0.000_Length_450	96.44	450	1234	785	99.8	0.0	740.0
@@ -361,7 +361,7 @@
 # Suject Length: 1365
 # Total Subject Coverage: 1054
 # Relative Subject Coverage: 0.772161172161
-# Maximum Bit Score: 771.0
+# Best Bit Score: 771.0
 # Mean Bit Score: 251.327272727
 Locus_1_Transcript_1/7_Confidence_0.231_Length_224	95.41	196	517	712	87.1	1e-83	313.0
 Locus_56_Transcript_1/1_Confidence_0.000_Length_450	98.0	450	1233	784	99.8	0.0	771.0
@@ -379,7 +379,7 @@
 # Suject Length: 3106
 # Total Subject Coverage: 2356
 # Relative Subject Coverage: 0.758531873793
-# Maximum Bit Score: 630.0
+# Best Bit Score: 630.0
 # Mean Bit Score: 238.359090909
 Locus_46_Transcript_1/1_Confidence_0.667_Length_178	94.94	178	2874	3051	99.4	6e-74	280.0
 Locus_72_Transcript_1/1_Confidence_0.000_Length_108	89.62	106	1902	1797	97.2	2e-32	141.0
@@ -408,7 +408,7 @@
 # Suject Length: 3107
 # Total Subject Coverage: 2356
 # Relative Subject Coverage: 0.758287737367
-# Maximum Bit Score: 630.0
+# Best Bit Score: 630.0
 # Mean Bit Score: 237.922727273
 Locus_46_Transcript_1/1_Confidence_0.667_Length_178	94.94	178	2875	3052	99.4	6e-74	280.0
 Locus_72_Transcript_1/1_Confidence_0.000_Length_108	89.62	106	1903	1798	97.2	2e-32	141.0
@@ -437,7 +437,7 @@
 # Suject Length: 3254
 # Total Subject Coverage: 2251
 # Relative Subject Coverage: 0.69176398279
-# Maximum Bit Score: 480.0
+# Best Bit Score: 480.0
 # Mean Bit Score: 226.3
 Locus_17_Transcript_3/3_Confidence_0.200_Length_456	72.27	458	1659	2113	99.6	3e-64	250.0
 Locus_43_Transcript_1/1_Confidence_0.000_Length_1002	70.31	458	2754	3205	44.4	2e-44	185.0
@@ -450,7 +450,7 @@
 # Suject Length: 3250
 # Total Subject Coverage: 2248
 # Relative Subject Coverage: 0.691692307692
-# Maximum Bit Score: 480.0
+# Best Bit Score: 480.0
 # Mean Bit Score: 224.5
 Locus_17_Transcript_3/3_Confidence_0.200_Length_456	72.27	458	1654	2108	99.6	3e-63	246.0
 Locus_43_Transcript_1/1_Confidence_0.000_Length_1002	70.52	458	2749	3200	44.4	2e-45	188.0
@@ -463,7 +463,7 @@
 # Suject Length: 3250
 # Total Subject Coverage: 2248
 # Relative Subject Coverage: 0.691692307692
-# Maximum Bit Score: 480.0
+# Best Bit Score: 480.0
 # Mean Bit Score: 224.5
 Locus_17_Transcript_3/3_Confidence_0.200_Length_456	72.27	458	1654	2108	99.6	3e-63	246.0
 Locus_43_Transcript_1/1_Confidence_0.000_Length_1002	70.52	458	2749	3200	44.4	2e-45	188.0
@@ -476,7 +476,7 @@
 # Suject Length: 1400
 # Total Subject Coverage: 1006
 # Relative Subject Coverage: 0.718571428571
-# Maximum Bit Score: 495.0
+# Best Bit Score: 495.0
 # Mean Bit Score: 222.133333333
 Locus_1_Transcript_1/7_Confidence_0.231_Length_224	89.18	194	518	711	86.2	3e-66	255.0
 Locus_56_Transcript_1/1_Confidence_0.000_Length_450	84.41	449	1233	785	99.6	4e-138	495.0
@@ -492,7 +492,7 @@
 # Suject Length: 1399
 # Total Subject Coverage: 1008
 # Relative Subject Coverage: 0.720514653324
-# Maximum Bit Score: 342.0
+# Best Bit Score: 342.0
 # Mean Bit Score: 157.290909091
 Locus_1_Transcript_1/7_Confidence_0.231_Length_224	87.63	194	518	711	86.2	2e-62	242.0
 Locus_56_Transcript_1/1_Confidence_0.000_Length_450	77.16	451	1234	785	99.8	6e-92	342.0
@@ -510,7 +510,7 @@
 # Suject Length: 3096
 # Total Subject Coverage: 2181
 # Relative Subject Coverage: 0.704457364341
-# Maximum Bit Score: 381.0
+# Best Bit Score: 381.0
 # Mean Bit Score: 151.023809524
 Locus_46_Transcript_1/1_Confidence_0.667_Length_178	80.45	179	2862	3039	99.4	5e-37	158.0
 Locus_72_Transcript_1/1_Confidence_0.000_Length_108	75.96	104	1888	1785	95.4	2e-12	75.2
@@ -538,7 +538,7 @@
 # Suject Length: 3096
 # Total Subject Coverage: 2181
 # Relative Subject Coverage: 0.704457364341
-# Maximum Bit Score: 381.0
+# Best Bit Score: 381.0
 # Mean Bit Score: 151.023809524
 Locus_46_Transcript_1/1_Confidence_0.667_Length_178	80.45	179	2862	3039	99.4	5e-37	158.0
 Locus_72_Transcript_1/1_Confidence_0.000_Length_108	75.96	104	1888	1785	95.4	2e-12	75.2
@@ -566,7 +566,7 @@
 # Suject Length: 389
 # Total Subject Coverage: 359
 # Relative Subject Coverage: 0.922879177378
-# Maximum Bit Score: 280.0
+# Best Bit Score: 280.0
 # Mean Bit Score: 150.366666667
 Locus_46_Transcript_1/1_Confidence_0.667_Length_178	94.94	178	157	334	99.4	6e-74	280.0
 Locus_82_Transcript_1/1_Confidence_1.000_Length_165	93.23	133	133	1	80.0	1e-49	199.0
@@ -585,7 +585,7 @@
 # Suject Length: 7617
 # Total Subject Coverage: 2353
 # Relative Subject Coverage: 0.30891427071
-# Maximum Bit Score: 212.0
+# Best Bit Score: 212.0
 # Mean Bit Score: 146.552941176
 Locus_7_Transcript_10/11_Confidence_0.154_Length_4093	68.39	367	2487	2847	8.9	1e-28	134.0
 Locus_7_Transcript_10/11_Confidence_0.154_Length_4093	65.43	564	4482	5036	13.5	1e-22	114.0
@@ -609,7 +609,7 @@
 # Suject Length: 7611
 # Total Subject Coverage: 2850
 # Relative Subject Coverage: 0.374458021285
-# Maximum Bit Score: 264.0
+# Best Bit Score: 264.0
 # Mean Bit Score: 141.735
 Locus_7_Transcript_10/11_Confidence_0.154_Length_4093	65.19	790	2481	3258	19.1	4e-36	159.0
 Locus_7_Transcript_10/11_Confidence_0.154_Length_4093	64.49	628	4416	5036	15.1	6e-21	109.0
@@ -636,7 +636,7 @@
 # Suject Length: 3420
 # Total Subject Coverage: 1015
 # Relative Subject Coverage: 0.296783625731
-# Maximum Bit Score: 241.0
+# Best Bit Score: 241.0
 # Mean Bit Score: 141.442857143
 Locus_69_Transcript_1/1_Confidence_0.000_Length_164	77.61	134	536	404	80.5	1e-19	100.0
 Locus_62_Transcript_1/1_Confidence_0.000_Length_130	80.39	102	1723	1824	77.7	3e-18	95.1
@@ -650,7 +650,7 @@
 # Suject Length: 3429
 # Total Subject Coverage: 1309
 # Relative Subject Coverage: 0.381743948673
-# Maximum Bit Score: 264.0
+# Best Bit Score: 264.0
 # Mean Bit Score: 135.325
 Locus_62_Transcript_1/1_Confidence_0.000_Length_130	85.71	77	1736	1812	58.5	1e-16	89.7
 Locus_65_Transcript_1/1_Confidence_0.000_Length_158	70.49	122	894	1015	76.6	3e-07	59.0
@@ -665,7 +665,7 @@
 # Suject Length: 3427
 # Total Subject Coverage: 1309
 # Relative Subject Coverage: 0.381966734753
-# Maximum Bit Score: 264.0
+# Best Bit Score: 264.0
 # Mean Bit Score: 135.3125
 Locus_62_Transcript_1/1_Confidence_0.000_Length_130	85.71	77	1729	1805	58.5	1e-16	89.7
 Locus_65_Transcript_1/1_Confidence_0.000_Length_158	70.49	122	887	1008	76.6	3e-07	59.0
@@ -680,7 +680,7 @@
 # Suject Length: 3427
 # Total Subject Coverage: 1309
 # Relative Subject Coverage: 0.381966734753
-# Maximum Bit Score: 264.0
+# Best Bit Score: 264.0
 # Mean Bit Score: 135.3125
 Locus_62_Transcript_1/1_Confidence_0.000_Length_130	85.71	77	1729	1805	58.5	1e-16	89.7
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