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comparison test-data/contigsandsinglets.fa @ 0:e2ae46b16b3b draft

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planemo upload for repository https://bitbucket.org/drosofff/gedtools/
author drosofff
date Sun, 21 Jun 2015 14:30:20 -0400
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comparison
equal deleted inserted replaced
-1:000000000000 0:e2ae46b16b3b
1 >Contig1
2 GTTGCATATTCAACCTGCCGAGCCCAGGAAGACTCAGGCGGGGGAGGCACTACATTAGGG
3 GTCGCAAAGCTAGACTTCTTGTATGGGATGTTGTTAACCTCCAAAATAGCTGCACAGATG
4 TATTCCTTAGCCAGTTTGGCAGAGGAAGACCAGGCTTCTCCCAACAGCTTCACATCCTGG
5 GTATGGTGGCTGTGGGCGTAGAGCCTAACTCCAACAGGATTGGCAGCATTTGGCCGTACC
6 TCAGATATCCATTTAGTGAATCCTGAGAATCTCCCGCTGACCATTGCATGGACATATGCC
7 ATGGCATCCTCTGCTGTATTTATATCGTGGGGAGGTGGATGGAGGTTCGATACTCCTGCA
8 ACGTCCAGGTTAATGAGCTCAGGTTGGGTTTTTACAATCTCCCGTCTCAAAGCTGACGTT
9 CTGGCTGCAGTAGTCTTATCAATCAGATTACGCTTTTCCTCCATTTCTTCTCTTTGACTG
10 TCCTGCAATGTGGGGAAAGGAGTCACTAGTGGGTATAAGGAAATCAAGTCTCCAAGTTCA
11 TCTCCAGTAGTGAAATAGCCCCCTTTAGCAGCACCCACAACAATTTGGTAGGCACTAGCT
12 CCAACTTTATCGGCAACAGTACCAACCTGAGAAACACCTCCAACTGAGGTAAGCCATCTA
13 ACGACGGCTTGAGCCATATTTGGTAGGAATTTCTCAGGGATGTCACCACTTTCTGTGATC
14 CGAACTACTTTGGGTCTGGGGTTCGGTTCTGAATACTGGACTTGCTGAGGTCTAAGAGCC
15 TCAAACACTTTGTACTCATCATTCAGATTCGCCTCAGGAGGAGGAGGGCATCCTACAACC
16 TCCTTGACATCATAGTCGTTGGATTGGACTGTCAAATTTATCTGCCTCACAGCCACTCTC
17 TGCTCCCTCTTAAACTCGTCCAGGAATCCTGACAATGTGGGGAACAGATTAATCCATCCC
18 GCTTTGTCATCCTCTCCATCTGAATAGAGGTCTAGACAGAAGTCCCGAGAGGGGAATCCT
19 GACGAATCTGGATATTCAAAGTCCTGGAGGGTTATATGTTCTGGCTTCGTTCCGGTTTGC
20 TCTTGCGTTTGCATGACAATAATCTCGCCGGGGATTGTGTTAACCACAGCGTGTATTGTC
21 TCTTCGATCCGAGGTATGCTGAATCCCATTGTTATCATTAAACCCCTCATACGGTCATAC
22 AGAGTTCTTTGGCGTGCCGTTCTAGATACTGCCTTTTCAAAGGGATTATCCTTCTGGCAG
23 AGCATCATCTCAAGAGCATCGCTCTCAGGCATTGTGGGGACATGTATCACACGGTGTCTG
24 TGGTACACTCCCATAATTTGTACGCCAAGAAATTTGTGGTCCGTAATTAGAC
25 >Contig2
26 TGGATTTTCATCCATTGCTGGAGGGCTTACTAGGATGGTCGACTGGATGTATGCCTGCCC
27 AAAGCGGCGGGGACGGGTTGTCTGTTACGGTGACGATGCATGTATAACATTTTGGAGCCA
28 GGGCGTCCTCTATCGGGTGGATCCAGATTTTAAACAAATGGACGGGTCCATAGATAGAGA
29 GGATGCAAGAATCACCATTGAGTGGGTCCTCCACCATCTCAGAAAGGATTTAGGTGTAGA
30 GGAGACCCCTGCTTTTTGGAAGACAGTTGCAGCAGTGTGGCTTGATATGGCCATTGACCC
31 CCACTTTATCGTGGATGGTAAAACTGTTTACAAGAAGAAGAACCCCCATGGACTCATGAC
32 TGGAGTTCCAGGAACAACCCTATTTGACACTGTGAAATCTGTAATAGTCTGGAATGAAAT
33 GTTGGATCAGGCTGGTGCAGGTTCCATAGACCTTTTAAATGAAGCTCAAGTAGTTGAATG
34 GATGAAGAGACAAGGCTTAGTTGTCAAAGAGGGAA
35 >Contig3
36 AACGTAAAACAAACGACATGGATGCATCTAACCCTATTATTTCAAGCGATAGAAGCACTG
37 TGAATCAGGTTTACGCGAAGATGGTGAGGAGAAAACGGCAAGATCTTGCCTATCTCCAGG
38 AGTTGGTGAGGACAGCCCATCGAGAGATTCTCCCCCAAGGAGAACTTCTCCATGAGTCGG
39 AAGCCAAACAGTATGTAGCCGAATATAAGGCTCGACTACCTGTGGTTGACACTAAGAAAG
40 TTGGCGAACTGCCAACTGAGGTCTTCCAGGTAGCACTCCCAAGT
41 >Contig4
42 TACGGTGCCCCTAAGAGAATCGAACTCAAACTCTCCAGTTGTGTAGTAACCAGAGAGCCA
43 CCGAGGAGGGACGGGGTGGTGATTATGAAAAGATGATGGGTTTTGGGGAGAGGTTATACA
44 ATTTCAAAATCTTGAACGGCCACTGGGTCTTCAGATATCACTTTGAAAGGACTGAGTGTC
45 GTTCCATCAGGCATACCCTCAAGTTTGGTCCTAATCTTAGCTGTGTCCTTGCTGAGAGCA
46 ACAGTTCTTGTTA
47 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_29_Transcript_1/1_Confidence_0.000_Length_607_hit1_IdMatch=97.7,AligLength=608,E-val=0.0
48 ACGCCCGAGAGCGTGGTCTTGGGCATGGCACTGTAGGCGACCTGACTCCCAGACTTTCGA
49 GGGCGATTTCGCCCTCTTCGACGGGGTCCTTGAACCATTGAGCAATTCTTTCCCACAATT
50 TGACGAGAAGATACACTCTGTACGGTAACCTTGGGGGAACGACGGTTTCTGGTGGAAAGA
51 TTGTTTCCACTGTTGTTTGATATGCGCTTTGTAGTTGTGACGATGGTGGCCATGGCATAA
52 TATTTACAAATTGTATTCTTGATTTGAGTTTGGGTTGTTTGATGTTATAGGGTCGGCAAG
53 AGCTTACTTGCAGTTCTCTTCCTCTTTTTGCGGTCGAGAGTCTTTTTGTTGAGTCTCGTC
54 CTTTGTTCTGCGGTCAGCAGTGATCTCTTCGATGCTACTTTAGGAGGTGGAAACCGGGAG
55 AATAAGTCTTGAATTCTCACACGGTAGTCATCAGGATTTTTATGACTAACCTCTCTAATA
56 AGCATCTGCACCTGGCGGGGACAGTGCCCCGGGAATTGCTGCATTATACTGTGAAACAGC
57 TCCAAATCCAGGGTTTCATGAACGGGCACAATCTGTGGCACAGCTTTAGGGGCAGTTGCA
58 TATTCAA
59 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_27_Transcript_1/1_Confidence_0.000_Length_471_hit1_IdMatch=97.66,AligLength=471,E-val=0.0
60 GCAAAAAGAATGCCTCTGATAGGGCAATCATAAAACTGTTAAACAAATACATGCCTAGGA
61 CAGGAAATAAGAACTGGCCTGGTGTCCATACAACCCCGGAAGAAGGCATACTTGATGGTA
62 TTAAGATAACGGCCAAATCCAGTGCAGGCGCTCCCTATTGGAGACACAAGGGGGAATGCC
63 TAGACCATATAATTGATACTGGACTTCCTGTTGTGCTAAAGCATATAAAGGAAGGAACCC
64 TCAATCAGTTGTGGCGGGAAAACCCTGAGATGTTCCTCGTTGAAGTTAAGAACAAACTTG
65 ATAGATACGAGGTTTCGAAGCTTAAAGAGAAGACTAGACCCTATGTGTGTGTACCTGCGC
66 ACTGGGCTCTCCTATTCTCGTGCTTGACTCAAGGATTCCAAGAAGGACTTCAAGTTTTTA
67 GTAACTTGGACCCCAGTACAGAATGCTCGAATGCATATGGATTTTCATCCA
68 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_14_Transcript_1/1_Confidence_0.000_Length_210_hit1_IdMatch=98.1,AligLength=210,E-val=3e-98
69 TGTCCCGTTGCACCCCCCATCCATTAACAATCGGGGTGGGCATACTCATGTCACTCGCCA
70 GATGGGCGGAGTACCTCACCCTCCTCTTGGTCTAATACCCATAGCTCAGAAGTACGGGGT
71 AGAGATCTTGGACCAGAAACATGTCTACACAGGAGGCACTTGGGATGGCTTTCTTAATAG
72 ACTCGCCCAACAGATGGGCCGGACAACGGT
73 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_24_Transcript_1/1_Confidence_0.000_Length_280_hit1_IdMatch=96.79,AligLength=280,E-val=4e-129
74 ACCATTTGTCCCCCATGGTGCATTTTCATGGTAAGGTAGTCACTGTTCCAGGAACCATCT
75 GAGGTGGTAAAAAGGTCCTGGAAACCAGTATCTGGAGTGATATCCTCGTCAATGGAGACA
76 GCTCCTAATTCAGCACCTTCAAACTCAATCACCCATTCGAGTGTGACAGTGAAGGTGGTG
77 CTTCCTGTGTATCCACCGGTGGTAGAGGCAACAACCACATTGATGAAGCCATGATTGGCG
78 TCATCAGGGTTGCCTTTGGTGAGATACCACTTACGGGTGG
79 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_22_Transcript_1/1_Confidence_0.000_Length_289_hit1_IdMatch=95.5,AligLength=289,E-val=1e-128
80 GGCCTGCAGGCCATAACTCGGTTGAGGTTTTGAGTGTCATTGCCTGAGATATTGTTGGCG
81 GGGTCTGGAGACCATCCTATGGCAAGGGATCCAAAAGTATTTGCACTTCCAGATCCCACT
82 ACCAGCACTCGGAGTTTCTTGGGTCGCCAGCGGGAATATAGCTTACTCTGCTGCTGAAGC
83 CTAGAATCACTCATAGCCGTTGGACATATGGCTTGAGCAAAAAGGCTAGCTCCCACTGCG
84 CGCTGCGGTTGTACCTCAATAACGCCTATAATGTCCACGCCCGAGAGCG
85 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_20_Transcript_1/1_Confidence_0.000_Length_352_hit1_IdMatch=98.01,AligLength=352,E-val=8e-171
86 GCATTCACTGCTCTAAGTTGCTCGGTCAGCTGGTCAATGCGGCGAAGTAGATTAGTTTCG
87 ACAGTCTGAACTGCTTCATCAGCCACCCTAAATTTAGGGATGGGAGGGCTAATGACAGGA
88 CCTTGGGTGTAATACTTGAGACATTTGCCAGTATCTCCAGTGCGGATATAATCTTTTGCA
89 TCTGTGTAACTGGCAAACATAACAAAACCTGGGATAGAGTAACCTTGTATAACTGCAAAG
90 AAGTTTGCTGTCTTCAAGGTCGTCTTGTCCTCAAGGTAGTAGGTTACATTTGTCCCTGGT
91 GCATTTGTATACACATAAGCCTGGTGGGCAGCCGAAAAGGGGACCATTTGTC