Mercurial > repos > drosofff > msp_cap3

comparison test-data/input.fa @ 0:e2ae46b16b3b draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://bitbucket.org/drosofff/gedtools/
author drosofff
date Sun, 21 Jun 2015 14:30:20 -0400
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:e2ae46b16b3b
1 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_19_Transcript_4/7_Confidence_0.286_Length_409_hit1_IdMatch=96.58,AligLength=409,E-val=0.0
2 TTAATGAGCTCAGGTTGGGTTTTTACAATCTCCCGTCTCAAAGCTGACGTTCTGGCTGCA
3 GTAGTCTTATCAATCAGATTACGCTTTTCCTCCATTTCTTCTCTTTGACTGTCCTGCAAT
4 GTGGGGAAAGGAGTCACTAGTGGGTATAAGGAAATCAAGTCTCCAAGTTCATCTCCAGTA
5 GTGAAATAGCCCCCTTTAGCAGCACCCACAACAATTTGGTAGGCACTAGCTCCAACTTTA
6 TCGGCAACAGTACCAACCTGAGAAACACCTCCAACTGAGGTAAGCCATCTAACGACGGCT
7 TGAGCCATATTTGGTAGGAATTTCTCAGGGATGTCACCACTTTCTGTGATCCGAACTACT
8 TTGGGTCTGGGGTTCGGTTCTGAATACTGGACTTGCTGAGGTTTAAGAG
9 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_19_Transcript_3/7_Confidence_0.286_Length_395_hit1_IdMatch=97.97,AligLength=395,E-val=0.0
10 GTTGCATATTCAACCTGCCGAGCCCAGGAAGACTCAGGCGGGGGAGGCACTACATTAGGG
11 GTCGCAAAGCTAGACTTCTTGTATGGGATGTTGTTAACCTCCAAAATAGCTGCACAGATG
12 TATTCCTTAGCCAGTTTGGCAGAGGAAGACCAGGCTTCTCCCAACAGCTTCACATCCTGG
13 GTATGGTGGCTGTGGGCGTAGAGCCTAACTCCAACAGGATTGGCAGCATTTGGCCGTACC
14 TCAGATATCCATTTAGTGAATCCTGAGAATCTCCCGCTGACCATTGCATGGACATATGCC
15 ATGGCATCCTCTGCTGTATTTATATCGTGGGGAGGTGGATGGAGGTTCGATACTCCTGCA
16 ACGTCCAGGTTAATGAGCTCAGGTTGGGTTTTTAC
17 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_29_Transcript_1/1_Confidence_0.000_Length_607_hit1_IdMatch=97.7,AligLength=608,E-val=0.0
18 ACGCCCGAGAGCGTGGTCTTGGGCATGGCACTGTAGGCGACCTGACTCCCAGACTTTCGA
19 GGGCGATTTCGCCCTCTTCGACGGGGTCCTTGAACCATTGAGCAATTCTTTCCCACAATT
20 TGACGAGAAGATACACTCTGTACGGTAACCTTGGGGGAACGACGGTTTCTGGTGGAAAGA
21 TTGTTTCCACTGTTGTTTGATATGCGCTTTGTAGTTGTGACGATGGTGGCCATGGCATAA
22 TATTTACAAATTGTATTCTTGATTTGAGTTTGGGTTGTTTGATGTTATAGGGTCGGCAAG
23 AGCTTACTTGCAGTTCTCTTCCTCTTTTTGCGGTCGAGAGTCTTTTTGTTGAGTCTCGTC
24 CTTTGTTCTGCGGTCAGCAGTGATCTCTTCGATGCTACTTTAGGAGGTGGAAACCGGGAG
25 AATAAGTCTTGAATTCTCACACGGTAGTCATCAGGATTTTTATGACTAACCTCTCTAATA
26 AGCATCTGCACCTGGCGGGGACAGTGCCCCGGGAATTGCTGCATTATACTGTGAAACAGC
27 TCCAAATCCAGGGTTTCATGAACGGGCACAATCTGTGGCACAGCTTTAGGGGCAGTTGCA
28 TATTCAA
29 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_11_Transcript_1/2_Confidence_0.667_Length_236_hit1_IdMatch=98.73,AligLength=236,E-val=2e-113
30 ATAGAAGCACTGTGAATCAGGTTTACGCGAAGATGGTGAGGAGAAAACGGCAAGATCTTG
31 CCTATCTCCAGGAGTTGGTGAGGACAGCCCATCGAGAGATTCTCCCCCAAGGAGAACTTC
32 TCCATGAGTCGGAAGCCAAACAGTATGTAGCCGAATATAAGGCTCGACTACCTGTGGTTG
33 ACACTAAGAAAGTTGGCGAACTGCCAACTGAGGTCTTCCAGGTAGCACTCCCAAGT
34 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_27_Transcript_1/1_Confidence_0.000_Length_471_hit1_IdMatch=97.66,AligLength=471,E-val=0.0
35 GCAAAAAGAATGCCTCTGATAGGGCAATCATAAAACTGTTAAACAAATACATGCCTAGGA
36 CAGGAAATAAGAACTGGCCTGGTGTCCATACAACCCCGGAAGAAGGCATACTTGATGGTA
37 TTAAGATAACGGCCAAATCCAGTGCAGGCGCTCCCTATTGGAGACACAAGGGGGAATGCC
38 TAGACCATATAATTGATACTGGACTTCCTGTTGTGCTAAAGCATATAAAGGAAGGAACCC
39 TCAATCAGTTGTGGCGGGAAAACCCTGAGATGTTCCTCGTTGAAGTTAAGAACAAACTTG
40 ATAGATACGAGGTTTCGAAGCTTAAAGAGAAGACTAGACCCTATGTGTGTGTACCTGCGC
41 ACTGGGCTCTCCTATTCTCGTGCTTGACTCAAGGATTCCAAGAAGGACTTCAAGTTTTTA
42 GTAACTTGGACCCCAGTACAGAATGCTCGAATGCATATGGATTTTCATCCA
43 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_19_Transcript_2/7_Confidence_0.143_Length_224_hit1_IdMatch=97.77,AligLength=224,E-val=3e-104
44 ACATCCTGGGTATGGTGGCTGTGGGCGTAGAGCCTAACTCCAACAGGATTGGCAGCATTT
45 GGCCGTACCTCAGATATCCATTTAGTGAATCCTGAGAATCTCCCGCTGACCATTGCATGG
46 ACATATGCCATGGCATCCTCTGCTGTATTTATATCGTGGGGAGGTGGATGGAGGTTCGAT
47 ACTCCTGCAACGTCCAGGTTAATGAGCTCAGGTTGGGTTTTTAC
48 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_21_Transcript_2/2_Confidence_0.333_Length_515_hit1_IdMatch=97.28,AligLength=515,E-val=0.0
49 TGGATTTTCATCCATTGCTGGAGGGCTTACTAGGATGGTCGACTGGATGTATGCCTGCCC
50 AAAGCGGCGGGGACGGGTTGTCTGTTACGGTGACGATGCATGTATAACATTTTGGAGCCA
51 GGGCGTCCTCTATCGGGTGGATCCAGATTTTAAACAAATGGACGGGTCCATAGATAGAGA
52 GGATGCAAGAATCACCATTGAGTGGGTCCTCCACCATCTCAGAAAGGATTTAGGTGTAGA
53 GGAGACCCCTGCTTTTTGGAAGACAGTTGCAGCAGTGTGGCTTGATATGGCCATTGACCC
54 CCACTTTATCGTGGATGGTAAAACTGTTTACAAGAAGAAGAACCCCCATGGACTCATGAC
55 TGGAGTTCCAGGAACAACCCTATTTGACACTGTGAAATCTGTAATAGTCTGGAATGAAAT
56 GTTGGATCAGGCTGGTGCAGGTTCCATAGACCTTTTAAATGAAGCTCAAGTAGTTGAATG
57 GATGAAGAGACAAGGCTTGGTTGTCAAAGAGGGAA
58 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_14_Transcript_1/1_Confidence_0.000_Length_210_hit1_IdMatch=98.1,AligLength=210,E-val=3e-98
59 TGTCCCGTTGCACCCCCCATCCATTAACAATCGGGGTGGGCATACTCATGTCACTCGCCA
60 GATGGGCGGAGTACCTCACCCTCCTCTTGGTCTAATACCCATAGCTCAGAAGTACGGGGT
61 AGAGATCTTGGACCAGAAACATGTCTACACAGGAGGCACTTGGGATGGCTTTCTTAATAG
62 ACTCGCCCAACAGATGGGCCGGACAACGGT
63 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_19_Transcript_1/7_Confidence_0.286_Length_199_hit1_IdMatch=98.48,AligLength=197,E-val=2e-92
64 GTTGCATATTCAACCTGCCGAGCCCAGGAAGACTCAGGCGGGGGAGGCACTACATTAGGG
65 GTCGCAAAGCTAGACTTCTTGTATGGGATGTTGTTAACCTCCAAAATAGCTGCACAGATG
66 TATTCCTTAGCCAGTTTGGCAGAGGAAGACCAGGCTTCTCCCAACAGCTTCACATCCTGG
67 GTATGGTGGCTGTGGGC
68 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_21_Transcript_1/2_Confidence_0.667_Length_506_hit1_IdMatch=97.04,AligLength=506,E-val=0.0
69 TGGATTTTCATCCATTGCTGGAGGGCTTACTAGGATGGTCGACTGGATGTATGCCTGCCC
70 AAAGCGGCGGGGACGGGTTGTCTGTTACGGTGACGATGCATGTATAACATTTTGGAGCCA
71 GGGCGTCCTCTATCGGGTGGATCCAGATTTTAAACAAATGGACGGGTCCATAGATAGAGA
72 GGATGCAAGAATCACCATTGAGTGGGTCCTCCACCATCTCAGAAAGGATTTAGGTGTAGA
73 GGAGACCCCTGCTTTTTGGAAGACAGTTGCAGCAGTGTGGCTTGATATGGCCATTGACCC
74 CCACTTTATCGTGGATGGTAAAACTGTTTACAAGAAGAAGAACCCCCATGGACTCATGAC
75 TGGAGTTCCAGGAACAACCCTATTTGACACTGTGAAATCTGTAATAGTCTGGAATGAAAT
76 GTTGGATCAGGCTGGTGCAGGTTCCATAGACCTTTTAAATGAAGCTCAAGTAGTTGAATG
77 GATGAAGAGACAAGGCTTAGTTGTCA
78 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_11_Transcript_2/2_Confidence_0.000_Length_284_hit1_IdMatch=98.94,AligLength=284,E-val=2e-139
79 AACGTAAAACAAACGACATGGATGCATCTAACCCTATTATTTCAAGCGATAGAAGCACTG
80 TGAATCAGGTTTATGCGAAGATGGTGAGGAGAAAACGGCAAGATCTTGCCTATCTCCAGG
81 AGTTGGTGAGGACAGCCCATCGAGAGATTCTCCCCCAAGGAGAACTTCTCCATGAGTCGG
82 AAGCCAAACAGTATGTAGCCGAATATAAGGCTCGACTACCTGTGGTTGACACTAAGAAAG
83 TTGGCGAACTGCCAACTGAGGTCTTCCAGGTAGCACTCCCAAGT
84 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_9_Transcript_2/2_Confidence_0.333_Length_251_hit1_IdMatch=98.0,AligLength=250,E-val=3e-118
85 TGGTGCCCCTAAGAGAATCGAACTCAAACTCTCCAGTTGTGTAGTAACCAGAGAGCCACC
86 GAGGAGGGACGGGGTGGTGATTATGAAAAGATGATGGGTTTTGGGGAGAGGTTATACAAT
87 TTCAAAATCTTGAACGGCCACTGGGTCTTCAGATATCACTTTGAAAGGACTGAGTGTCGT
88 TCCATCAGGCATACCCTCAAGTTTGGTCCTAATCTTAGCTGTGTCCTTGCTGAGAGCAAC
89 AGTTCTTGTTA
90 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_19_Transcript_7/7_Confidence_0.000_Length_627_hit1_IdMatch=97.93,AligLength=627,E-val=0.0
91 GTTCTGAATACTGGACTTGCTGAGGTCTAAGAGCCTCAAACACTTTGTACTCATCATTCA
92 GATTCGCCTCAGGAGGAGGAGGGCATCCTACAACCTCCTTGACATCATAGTCGTTGGATT
93 GGACTGTCAAATTTATCTGCCTCACAGCCACTCTCTGCTCCCTCTTAAACTCGTCCAGGA
94 ATCCTGACAATGTGGGGAACAGATTAATCCATCCCGCTTTGTCATCCTCTCCATCTGAAT
95 AGAGGTCTAGACAGAAGTCCCGAGAGGGGAATCCTGACGAATCTGGATATTCAAAGTCCT
96 GGAGGGTTATATGTTCTGGCTTCGTTCCGGTTTGCTCTTGCGTTTGCATGACAATAATCT
97 CGCCGGGGATTGTGTTAACCACAGCGTGTATTGTCTCTTCGATCCGAGGTATGCTGAATC
98 CCATTGTTATCATTAAACCCCTCATACGGTCATACAGAGTTCTTTGGCGTGCCGTTCTAG
99 ATACTGCCTTTTCAAAGGGATTATCCTTCTGGCAGAGCATCATCTCAAGAGCATCGCTCT
100 CAGGCATTGTGGGGACATGTATCACACGGTGTCTGTGGTACACTCCCATAATTTGTACGC
101 CAAGAAATTTGTGGTCCGTAATTAGAC
102 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_24_Transcript_1/1_Confidence_0.000_Length_280_hit1_IdMatch=96.79,AligLength=280,E-val=4e-129
103 ACCATTTGTCCCCCATGGTGCATTTTCATGGTAAGGTAGTCACTGTTCCAGGAACCATCT
104 GAGGTGGTAAAAAGGTCCTGGAAACCAGTATCTGGAGTGATATCCTCGTCAATGGAGACA
105 GCTCCTAATTCAGCACCTTCAAACTCAATCACCCATTCGAGTGTGACAGTGAAGGTGGTG
106 CTTCCTGTGTATCCACCGGTGGTAGAGGCAACAACCACATTGATGAAGCCATGATTGGCG
107 TCATCAGGGTTGCCTTTGGTGAGATACCACTTACGGGTGG
108 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_19_Transcript_6/7_Confidence_0.143_Length_1372_hit1_IdMatch=97.59,AligLength=1372,E-val=0.0
109 GTTGCATATTCAACCTGCCGAGCCCAGGAAGACTCAGGCGGGGGAGGCACTACATTAGGG
110 GTCGCAAAGCTAGACTTCTTGTATGGGATGTTGTTAACCTCCAAAATAGCTGCACAGATG
111 TATTCCTTAGCCAGTTTGGCAGAGGAAGACCAGGCTTCTCCCAACAGCTTCACATCCTGG
112 GTATGGTGGCTGTGGGCGTAGAGCCTAACTCCAACAGGATTGGCAGCATTTGGCCGTACC
113 TCAGATATCCATTTAGTGAATCCTGAGAATCTCCCGCTGACCATTGCATGGACATATGCC
114 ATGGCATCCTCTGCTGTATTTATATCGTGGGGAGGTGGATGGAGGTTCGATACTCCTGCA
115 ACGTCCAGGTTAATGAGCTCAGGTTGGGTTTTTACAATCTCCCGTCTCAAAGCTGACGTT
116 CTGGCTGCAGTAGTCTTATCAATCAGATTACGCTTTTCCTCCATTTCTTCTCTTTGACTG
117 TCCTGCAATGTGGGGAAAGGAGTCACTAGTGGGTATAAGGAAATCAAGTCTCCAAGTTCA
118 TCTCCAGTAGTGAAATAGCCCCCTTTAGCAGCACCCACAACAATTTGGTAGGCACTAGCT
119 CCAACTTTATCGGCAACAGTACCAACCTGAGAAACACCTCCAACTGAGGTAAGCCATCTA
120 ACGACGGCTTGAGCCATATTTGGTAGGAATTTCTCAGGGATGTCACCACTTTCTGTGATC
121 CGAACTACTTTGGGTCTGGGGTTCGGTTCTGAATACTGGACTTGCTGAGGTCTAAGAGCC
122 TCAAACACTTTGTACTCATCATTCAGATTCGCCTCAGGAGGAGGAGGGCATCCTACAACC
123 TCCTTGACATCATAGTCGTTGGATTGGACTGTCAAATTTATCTGCCTCACAGCCACTCTC
124 TGCTCCCTCTTAAACTCGTCCAGGAATCCTGACAATGTGGGGAACAGATTAATCCATCCC
125 GCTTTGTCATCCTCTCCATCTGAATAGAGGTCTAGACAGAAGTCCCGAGAGGGGAATCCT
126 GACGAATCTGGATATTCAAAGTCCTGGAGGGTTATATGTTCTGGCTTCGTTCCGGTTTGC
127 TCTTGCGTTTGCATGACAATAATCTCGCCGGGGATTGTGTTAACCACAGCGTGTATTGTC
128 TCTTCGATCCGAGGTATGCTGAATCCCATTGTTATCATTAAACCCCTCATACGGTCATAC
129 AGAGTTCTTTGGCGTGCCGTTCTAGATACTGCCTTTTCAAAGGGATTATCCTTCTGGCAG
130 AGCATCATCTCAAGAGCATCGCTCTCAGGCATTGTGGGGACATGTATCACACGGTGTCTG
131 TGGTACACTCCCATAATTTGTACGCCAAGAAATTTGTGGTCCGTAATTAGAC
132 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_22_Transcript_1/1_Confidence_0.000_Length_289_hit1_IdMatch=95.5,AligLength=289,E-val=1e-128
133 GGCCTGCAGGCCATAACTCGGTTGAGGTTTTGAGTGTCATTGCCTGAGATATTGTTGGCG
134 GGGTCTGGAGACCATCCTATGGCAAGGGATCCAAAAGTATTTGCACTTCCAGATCCCACT
135 ACCAGCACTCGGAGTTTCTTGGGTCGCCAGCGGGAATATAGCTTACTCTGCTGCTGAAGC
136 CTAGAATCACTCATAGCCGTTGGACATATGGCTTGAGCAAAAAGGCTAGCTCCCACTGCG
137 CGCTGCGGTTGTACCTCAATAACGCCTATAATGTCCACGCCCGAGAGCG
138 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_19_Transcript_5/7_Confidence_0.286_Length_421_hit1_IdMatch=96.67,AligLength=421,E-val=0.0
139 TACTCCTGCAACGTCCAGATTAATGAGCTCAGGTTGGGTTTTTACAATCTCCCGTCTCAA
140 AGCTGACGTTCTGGCTGCAGTAGTCTTATCAATCAGATTACGCTTTTCCTCCATTTCTTC
141 TCTTTGACTGTCCTGCAATGTGGGGAAAGGAGTCACTAGTGGGTATAAGGAAATCAAGTC
142 TCCAAGTTCATCTCCAGTAGTGAAATAGCCCCCTTTAGCAGCACCCACAACAATTTGGTA
143 GGCACTAGCTCCAACTTTATCGGCAACAGTACCAACCTGAGAAACACCTCCAACTGAGGT
144 AAGCCATCTAACGACGGCTTGAGCCATATTTGGTAGGAATTTCTCAGGGATGTCACCACT
145 TTCTGTGATCCGAACTACTTTGGGTCTGGGGTTCGGTTCTGAATACTGGACTTGCTGAGG
146 T
147 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_9_Transcript_1/2_Confidence_0.667_Length_253_hit1_IdMatch=98.0,AligLength=250,E-val=3e-118
148 TACGGTGCCCCTAAGAGAATCGAACTCAAACTCTCCAGTTGTGTAGTAACCAGAGAGCCA
149 CCGAGGAGGGACGGGGTGGTGATTATGAAAAGATGATGGGTTTTGGGGAGAGGTTATACA
150 ATTTCAAAATCTTGAACGGCCACTGGGTCTTCAGATATCACTTTGAAAGGACTGAGTGTC
151 GTTCCATCAGGCATACCCTCAAGTTTGGTCCTAATCTTAGCTGTGTCCTTGCTGAGAGCA
152 ACAGTTCTTGTTA
153 >gi|225356593|gb|FJ150422.1|_Drosophila_A_virus_isolate_HD,_complete_genome--Locus_20_Transcript_1/1_Confidence_0.000_Length_352_hit1_IdMatch=98.01,AligLength=352,E-val=8e-171
154 GCATTCACTGCTCTAAGTTGCTCGGTCAGCTGGTCAATGCGGCGAAGTAGATTAGTTTCG
155 ACAGTCTGAACTGCTTCATCAGCCACCCTAAATTTAGGGATGGGAGGGCTAATGACAGGA
156 CCTTGGGTGTAATACTTGAGACATTTGCCAGTATCTCCAGTGCGGATATAATCTTTTGCA
157 TCTGTGTAACTGGCAAACATAACAAAACCTGGGATAGAGTAACCTTGTATAACTGCAAAG
158 AAGTTTGCTGTCTTCAAGGTCGTCTTGTCCTCAAGGTAGTAGGTTACATTTGTCCCTGGT
159 GCATTTGTATACACATAAGCCTGGTGGGCAGCCGAAAAGGGGACCATTTGTC