<?xml version="1.0"?>
<tool_dependency>
  <package name="velvet" version="1.2.10_9adf09f7ded7fedaf6b0e5e4edf9f46602e263d3">
      <repository changeset_revision="b3e2c0f12e11" name="package_ged_velvet" owner="drosofff" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
  </package>
  <package name="oases" version="0.2.08_7a32460a60929b510037952ae815bb6e29b68123">
    <install version="1.0">
      <actions>
        <action type="shell_command">git clone git://github.com/dzerbino/oases.git</action>
        <action type="shell_command">git reset --hard 7a32460a60929b510037952ae815bb6e29b68123</action>
        <action type="shell_command">sed -i -e "32s/cleanobj//" Makefile</action>
        <action type="shell_command">sed -i -e "32s/doc//" Makefile</action>
        <action type="set_environment_for_install">
          <repository changeset_revision="b3e2c0f12e11" name="package_ged_velvet" owner="drosofff" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
            <package name="velvet" version="1.2.10_9adf09f7ded7fedaf6b0e5e4edf9f46602e263d3" />
          </repository>
        </action>
        <action type="shell_command">VELVETPATH=`echo $PATH | awk -F: '{print $1}'`; make VELVET_DIR=$VELVETPATH MAXKMERLENGTH=70</action>
        <action type="move_directory_files">
            <source_directory>.</source_directory>
            <destination_directory>$INSTALL_DIR</destination_directory>
        </action>
<!--        <action type="move_file">
            <source>oases</source>
            <destination>$INSTALL_DIR</destination>
        </action> -->
        <action type="set_environment">
          <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
        </action>
      </actions>
    </install>
  </package>
</tool_dependency>