--- a/test-data/edgeR_result_file.tab	Mon May 29 17:08:36 2017 -0400
+++ b/test-data/edgeR_result_file.tab	Tue May 30 10:34:53 2017 -0400
@@ -1,209 +1,209 @@
 DM297_I-int	2.69047105438237	4.49448726299278e-21	LTR	Gypsy
-DM297_LTR	1.74961921158059	1.33970311551615e-18	LTR	Gypsy
-Gypsy1-I_DM	2.37388633230267	4.48026988289666e-16	LTR	Gypsy
-NOF_FB	-2.79644759297337	4.48026988289666e-16	DNA	MULE-NOF
-G7_DM	3.25987374806405	1.55296802933851e-15	LINE	Jockey
-Gypsy_I-int	1.74702179622354	4.35250852544863e-12	LTR	Gypsy
-LINEJ1_DM	1.94429217926762	5.18070558191679e-12	LINE	Jockey
-TOM_I-int	1.33935222283437	6.69227956217608e-12	LTR	Gypsy
-GTWIN_LTR	1.89490932455113	8.80590960311443e-12	LTR	Gypsy
-Gypsy_LTR	1.56024435809038	2.99852403113839e-11	LTR	Gypsy
+DM297_LTR	1.74961921158059	1.33970311552449e-18	LTR	Gypsy
+Gypsy1-I_DM	2.37388633230267	4.48026988291108e-16	LTR	Gypsy
+NOF_FB	-2.79644759297337	4.48026988291108e-16	DNA	MULE-NOF
+G7_DM	3.25987374806405	1.55296802933692e-15	LINE	Jockey
+Gypsy_I-int	1.74702179622354	4.35250852545265e-12	LTR	Gypsy
+LINEJ1_DM	1.94429217926762	5.18070558194078e-12	LINE	Jockey
+TOM_I-int	1.33935222283437	6.6922795621824e-12	LTR	Gypsy
+GTWIN_LTR	1.89490932455113	8.80590960313784e-12	LTR	Gypsy
+Gypsy_LTR	1.56024435809038	2.99852403114994e-11	LTR	Gypsy
 DM1731_I-int	1.53134429520835	6.4920552091728e-10	LTR	Copia
-Gypsy6_LTR	1.53023046204423	1.07509345482697e-06	LTR	Gypsy
+Gypsy6_LTR	1.53023046204423	1.07509345482848e-06	LTR	Gypsy
 LOOPER1_DM	-2.46983670012103	1.61917280285007e-06	DNA	PiggyBac
-TIRANT_LTR	1.12203469288475	1.7801266502904e-06	LTR	Gypsy
-Gypsy12_I-int	-1.12204057066646	2.19485691074398e-06	LTR	Gypsy
+TIRANT_LTR	1.12203469288475	1.78012665029166e-06	LTR	Gypsy
+Gypsy12_I-int	-1.12204057066646	2.19485691074579e-06	LTR	Gypsy
 R2_DM	1.67889583354494	2.73035057005978e-06	LINE	R2
-TRANSPAC_LTR	1.49364968145495	2.90210475425899e-06	LTR	Gypsy
-Copia_LTR	1.66649088148806	1.186041112787e-05	LTR	Copia
+TRANSPAC_LTR	1.49364968145495	2.9021047542613e-06	LTR	Gypsy
+Copia_LTR	1.66649088148806	1.18604111278586e-05	LTR	Copia
 ACCORD_LTR	1.3724059468295	1.75953804703817e-05	LTR	Gypsy
 TIRANT_I-int	1.17728139313168	2.04686461971632e-05	LTR	Gypsy
-TART_B1	-1.14695345949677	3.0965848472869e-05	LINE	Jockey
-TRANSIB1	-1.3902119423097	6.16503339250287e-05	DNA	CMC-Transib
-DM412B_LTR	0.803090050933452	0.00012443453312394	LTR	Gypsy
+TART_B1	-1.14695345949677	3.09658484730011e-05	LINE	Jockey
+TRANSIB1	-1.3902119423097	6.16503339250305e-05	DNA	CMC-Transib
+DM412B_LTR	0.803090050933452	0.00012443453312414	LTR	Gypsy
 MICROPIA_LTR	-1.29556276189806	0.000129852108160169	LTR	Gypsy
-G6_DM	-1.05894868960943	0.000138305097075555	LINE	Jockey
-NINJA_I-int	-0.874264518473233	0.000155536374045889	LTR	Pao
-R1_DM	0.955905154410719	0.000189845334696753	LINE	R1
+G6_DM	-1.05894868960943	0.000138305097075584	LINE	Jockey
+NINJA_I-int	-0.874264518473233	0.000155536374046075	LTR	Pao
+R1_DM	0.955905154410719	0.000189845334697796	LINE	R1
 Invader6_LTR	-1.18865109431199	0.000212988712815497	LTR	Gypsy
 Copia_I-int	1.9331690527025	0.000223130721644621	LTR	Copia
-BLASTOPIA_LTR	1.34881958569428	0.000364879309201074	LTR	Gypsy
+BLASTOPIA_LTR	1.34881958569428	0.000364879309201161	LTR	Gypsy
 LSU-rRNA_Hsa	2.61189118344978	0.000801598301190925	rRNA	rRNA
-TRANSPAC_I-int	1.16122217809542	0.000845313292127692	LTR	Gypsy
-G4_DM	-0.74970144243323	0.000914365923267139	LINE	Jockey
+TRANSPAC_I-int	1.16122217809542	0.000845313292130344	LTR	Gypsy
+G4_DM	-0.74970144243323	0.000914365923267624	LINE	Jockey
 SSU-rRNA_Hsa	1.12389968473263	0.0010425909765405	rRNA	rRNA
-DOC5_DM	-0.809872869194368	0.00162410751644232	LINE	Jockey
-Invader1_I-int	0.749727833008358	0.00198920329215514	LTR	Gypsy
+DOC5_DM	-0.809872869194368	0.00162410751644423	LINE	Jockey
+Invader1_I-int	0.749727833008358	0.00198920329215702	LTR	Gypsy
 TRANSIB4	-1.00230688125284	0.00206051807311839	DNA	CMC-Transib
 MICROPIA_I-int	-0.751193028928835	0.00292932704926266	LTR	Gypsy
 PLACW_DM	1.16310826488548	0.00305178248567248	DNA	P
-TABOR_I-int	0.737702190628259	0.00354953953974351	LTR	Gypsy
+TABOR_I-int	0.737702190628259	0.00354953953973759	LTR	Gypsy
 I_DM	1.04141382256571	0.00457151681951996	LINE	I
-Gypsy3_I-int	0.586594796021762	0.00533147146680049	LTR	Gypsy
-DOC	0.94015335715084	0.00552118010545893	LINE	Jockey
+Gypsy3_I-int	0.586594796021762	0.00533147146680179	LTR	Gypsy
+DOC	0.94015335715084	0.00552118010544697	LINE	Jockey
 Helitron1_DM	-5.10401049101919	0.00636579556275411	RC	Helitron
 Invader5_I-int	-0.973422642391873	0.00666026639838213	LTR	Gypsy
-ACCORD_I-int	0.593047691019391	0.00701363615971111	LTR	Gypsy
+ACCORD_I-int	0.593047691019391	0.00701363615971209	LTR	Gypsy
 LSU-rRNA_Dme	0.902204791675651	0.0102101724391352	rRNA	rRNA
 DM412	0.775970807845826	0.0108079710929838	LTR	Gypsy
 NINJA_LTR	-0.923408172476265	0.0109563169817133	LTR	Pao
-BATUMI_I-int	-0.562867612987509	0.0148551719821076	LTR	Pao
-DMRT1C	-0.664744166716986	0.0174563775735501	LINE	R1
-TAHRE	-0.509503033739914	0.0198535740576257	LINE	Jockey
-Gypsy8_I-int	-0.578276897527121	0.0248976847994196	LTR	Gypsy
-BLASTOPIA_I-int	0.796987753936179	0.0301824235833281	LTR	Gypsy
+BATUMI_I-int	-0.562867612987509	0.0148551719821132	LTR	Pao
+DMRT1C	-0.664744166716986	0.0174563775735471	LINE	R1
+TAHRE	-0.509503033739914	0.0198535740576507	LINE	Jockey
+Gypsy8_I-int	-0.578276897527121	0.0248976847994314	LTR	Gypsy
+BLASTOPIA_I-int	0.796987753936179	0.0301824235833205	LTR	Gypsy
 Gypsy11_I-int	-0.734634622561586	0.0432538714324547	LTR	Gypsy
 DMRT1A	-0.509608409844153	0.0432538714324547	LINE	R1
 DM176_LTR	-0.691384671506076	0.0432538714324547	LTR	Gypsy
-QUASIMODO2-I_DM	0.470057940126177	0.044414105251961	LTR	Gypsy
-MuDR-1_DEl	1.35524442785064	0.053231954651916	DNA	MULE-NOF
-DM1731_LTR	0.752238181600754	0.0540130070646255	LTR	Copia
-FROGGER_I-int	-0.60531971025629	0.0540130070646255	LTR	Copia
-MAX_I-int	-0.516456091983578	0.064340206781843	LTR	Pao
-BURDOCK_I-int	0.418223330277469	0.0691214301126655	LTR	Gypsy
+QUASIMODO2-I_DM	0.470057940126177	0.044414105251971	LTR	Gypsy
+MuDR-1_DEl	1.35524442785064	0.0532319546519159	DNA	MULE-NOF
+DM1731_LTR	0.752238181600754	0.0540130070646644	LTR	Copia
+FROGGER_I-int	-0.60531971025629	0.0540130070646644	LTR	Copia
+MAX_I-int	-0.516456091983578	0.0643402067819527	LTR	Pao
+BURDOCK_I-int	0.418223330277469	0.0691214301126813	LTR	Gypsy
 FROGGER_LTR	0.888326398013863	0.0706362756551064	LTR	Copia
-DIVER_I-int	0.579052226156673	0.0738156276915433	LTR	Pao
-Chouto_I-int	-0.551029990754245	0.0815115938596914	LTR	Gypsy
-DM176_I-int	0.387008766766431	0.0918637211505558	LTR	Gypsy
-Invader4_I-int	0.532747054501905	0.0948962153499253	LTR	Gypsy
+DIVER_I-int	0.579052226156673	0.0738156276916979	LTR	Pao
+Chouto_I-int	-0.551029990754245	0.081511593859774	LTR	Gypsy
+DM176_I-int	0.387008766766431	0.0918637211505497	LTR	Gypsy
+Invader4_I-int	0.532747054501905	0.0948962153500033	LTR	Gypsy
 G3_DM	-0.607648157164968	0.103160664266056	LINE	Jockey
 Gypsy4_LTR	0.67676362702008	0.105307005535582	LTR	Gypsy
 BATUMI_LTR	-0.625598883331715	0.112325719453317	LTR	Pao
-Gypsy2-I_DM	0.418860685191156	0.127538985839663	LTR	Gypsy
+Gypsy2-I_DM	0.418860685191156	0.127538985839499	LTR	Gypsy
 Invader3_LTR	-0.553726127316243	0.130228544874336	LTR	Gypsy
 SSU-rRNA_Dme	0.50182621141568	0.130837858091619	rRNA	rRNA
 MDG3_I-int	0.417195433411295	0.130837858091619	LTR	Gypsy
-G5A_DM	-0.468375220785066	0.142388172856161	LINE	Jockey
-S2_DM	-0.576444154651049	0.154380925206595	DNA	TcMar-Tc1
+G5A_DM	-0.468375220785066	0.142388172856184	LINE	Jockey
+S2_DM	-0.576444154651051	0.154380925206633	DNA	TcMar-Tc1
 Stalker2_I-int	-0.424817076156048	0.157921464286182	LTR	Gypsy
 R1-2_DM	-0.611853226580459	0.158635278613665	LINE	R1
 BLOOD_LTR	0.494999752604753	0.158635278613665	LTR	Gypsy
 Invader5_LTR	-0.675984091871337	0.158635278613665	LTR	Gypsy
 Transib5	-0.51646991193603	0.158635278613665	DNA	CMC-Transib
 TLD2	-1.24823548505769	0.158665416598185	LTR	Gypsy
-TC1_DM	0.400572910860442	0.167626897114744	DNA	TcMar-Tc1
-BS2	-0.331386491833491	0.185478101135177	LINE	Jockey
+TC1_DM	0.400572910860442	0.167626897114732	DNA	TcMar-Tc1
+BS2	-0.331386491833491	0.185478101135035	LINE	Jockey
 ROVER-LTR_DM	-0.529681787599071	0.188737381603441	LTR	Gypsy
-ACCORD2_I-int	-0.350572607465432	0.191790844708865	LTR	Gypsy
-Gypsy12A_LTR	-0.354465506898828	0.204428444984683	LTR	Gypsy
-FW3_DM	-0.476342557702003	0.216920256528965	LINE	Jockey
-ROO_LTR	0.400232536676205	0.244465267215694	LTR	Pao
-STALKER4_LTR	0.383349427659289	0.248258091824802	LTR	Gypsy
+ACCORD2_I-int	-0.350572607465432	0.191790844708841	LTR	Gypsy
+Gypsy12A_LTR	-0.354465506898828	0.204428444984748	LTR	Gypsy
+FW3_DM	-0.476342557702003	0.216920256528982	LINE	Jockey
+ROO_LTR	0.400232536676207	0.244465267216066	LTR	Pao
+STALKER4_LTR	0.383349427659289	0.248258091824749	LTR	Gypsy
 POGON1	0.482507112501569	0.255779427421414	DNA	TcMar-Pogo
-HOBO	-0.283220815078204	0.273166685685483	DNA	hAT-hobo
-BS3_DM	-0.418041606433149	0.277910060681488	LINE	Jockey
+HOBO	-0.283220815078204	0.273166685685814	DNA	hAT-hobo
+BS3_DM	-0.418041606433149	0.277910060681416	LINE	Jockey
 P-1_DY	0.969417874734635	0.280951304168472	DNA	P
 Gypsy9_I-int	-0.437336296478435	0.280951304168472	LTR	Gypsy
-Bica_I-int	-0.363151852276852	0.287621291763233	LTR	Gypsy
-DMCR1A	-0.342108879038489	0.320538100201857	LINE	CR1
-Mariner2_DM	-0.422114252836712	0.320538100201857	DNA	TcMar-Tc1
+Bica_I-int	-0.363151852276854	0.287621291763315	LTR	Gypsy
+DMCR1A	-0.342108879038489	0.320538100201906	LINE	CR1
+Mariner2_DM	-0.422114252836712	0.320538100201906	DNA	TcMar-Tc1
 TRANSIB3	0.344232145502121	0.322658401361327	DNA	CMC-Transib
 Gypsy7_LTR	-0.484940393339899	0.322658401361327	LTR	Gypsy
 DMRPR	0.474671090698546	0.369600785239272	Unknown	Unknown
 DIVER2_LTR	-0.381362071713278	0.384462351162869	LTR	Pao
-Gypsy1-LTR_DM	0.341547880045558	0.384860099197011	LTR	Gypsy
-SSU-rRNA_Cel	0.268693361351043	0.389414554540408	rRNA	rRNA
-DOC4_DM	0.362114244909638	0.389414554540408	LINE	Jockey
-ZAM_I-int	0.25296287202699	0.397202788288859	LTR	Gypsy
-XDMR_DM	-0.256211211677393	0.40891453273183	Unknown	Unknown
+Gypsy1-LTR_DM	0.341547880045558	0.384860099197221	LTR	Gypsy
+SSU-rRNA_Cel	0.268693361351043	0.389414554540185	rRNA	rRNA
+DOC4_DM	0.362114244909638	0.389414554540185	LINE	Jockey
+ZAM_I-int	0.25296287202699	0.397202788288282	LTR	Gypsy
+XDMR_DM	-0.256211211677393	0.408914532732159	Unknown	Unknown
 Chimpo_LTR	-0.460515218470088	0.409319591327129	LTR	Gypsy
-DOC2_DM	-0.219218822289782	0.412039231991164	LINE	Jockey
-PROTOP	-0.21894181311432	0.412039231991164	DNA	P
-HETA	-0.298692871636692	0.412039231991164	LINE	Jockey
-HELENA_RT	0.306716860759321	0.412039231991164	LINE	Jockey
-Invader2_LTR	-0.349451178427879	0.412039231991164	LTR	Gypsy
-BLOOD_I-int	0.301193505006723	0.412039231991164	LTR	Gypsy
-5S_DM	-0.36064468671157	0.412039231991164	RNA	RNA
-CIRCE	-0.21220098912431	0.412039231991164	LTR	Gypsy
+DOC2_DM	-0.219218822289782	0.412039231991319	LINE	Jockey
+PROTOP	-0.21894181311432	0.412039231991319	DNA	P
+HETA	-0.298692871636692	0.412039231991319	LINE	Jockey
+HELENA_RT	0.306716860759321	0.412039231991319	LINE	Jockey
+Invader2_LTR	-0.349451178427879	0.412039231991319	LTR	Gypsy
+BLOOD_I-int	0.301193505006723	0.412039231991319	LTR	Gypsy
+5S_DM	-0.36064468671157	0.412039231991319	RNA	RNA
+CIRCE	-0.21220098912431	0.412039231991319	LTR	Gypsy
 ACCORD2_LTR	-0.373877436518785	0.415323684742582	LTR	Gypsy
 BARI1	-0.361825471165769	0.439062969216072	DNA	TcMar-Tc1
-Copia2_I-int	-0.199651272204726	0.454016393979065	LTR	Copia
+Copia2_I-int	-0.199651272204726	0.454016393978291	LTR	Copia
 Chouto_LTR	-0.42256718750228	0.457631460799645	LTR	Gypsy
-S_DM	0.193275098711318	0.466588891241469	DNA	TcMar-Tc1
-Gypsy6_I-int	0.244887845096584	0.469668398060558	LTR	Gypsy
-NOMAD_LTR	-0.310707505731374	0.469668398060558	LTR	Gypsy
-Chimpo_I-int	-0.3198026895528	0.469668398060558	LTR	Gypsy
-Gypsy2_LTR	0.337405927915915	0.469668398060558	LTR	Gypsy
-DIVER2_I-int	-0.217400353167491	0.48214327316296	LTR	Pao
-DOC3_DM	-0.226748306440889	0.495640056966085	LINE	Jockey
-XDMR	0.249633734746355	0.503551868695272	Unknown	Unknown
-ROO_I-int	0.276608752749181	0.505091620203207	LTR	Pao
+S_DM	0.193275098711318	0.466588891242574	DNA	TcMar-Tc1
+Gypsy6_I-int	0.244887845096584	0.469668398060595	LTR	Gypsy
+NOMAD_LTR	-0.310707505731374	0.469668398060595	LTR	Gypsy
+Chimpo_I-int	-0.3198026895528	0.469668398060595	LTR	Gypsy
+Gypsy2_LTR	0.337405927915915	0.469668398060595	LTR	Gypsy
+DIVER2_I-int	-0.217400353167491	0.482143273163041	LTR	Pao
+DOC3_DM	-0.226748306440889	0.495640056965812	LINE	Jockey
+XDMR	0.249633734746355	0.503551868695532	Unknown	Unknown
+ROO_I-int	0.276608752749181	0.50509162020251	LTR	Pao
 BURDOCK_LTR	0.32676718204459	0.510777537217992	LTR	Gypsy
-BEL_I-int	0.237362494177496	0.533794803142518	LTR	Pao
-ROOA_I-int	-0.194233478923581	0.533794803142518	LTR	Pao
-Invader6_I-int	-0.205266937253198	0.533794803142518	LTR	Gypsy
-DOC6_DM	0.222079405295424	0.536617484807693	LINE	Jockey
-DIVER_LTR	0.271030983517942	0.536617484807693	LTR	Pao
-GTWIN_I-int	0.193808394449743	0.536617484807693	LTR	Gypsy
-MAX_LTR	-0.257749452683052	0.540151898310394	LTR	Pao
+BEL_I-int	0.237362494177496	0.533794803142695	LTR	Pao
+ROOA_I-int	-0.194233478923581	0.533794803142695	LTR	Pao
+Invader6_I-int	-0.205266937253198	0.533794803142695	LTR	Gypsy
+DOC6_DM	0.222079405295424	0.536617484807809	LINE	Jockey
+DIVER_LTR	0.271030983517942	0.536617484807809	LTR	Pao
+GTWIN_I-int	0.193808394449743	0.536617484807809	LTR	Gypsy
+MAX_LTR	-0.257749452683052	0.540151898310569	LTR	Pao
 Transib-N1_DM	-0.285359544492984	0.568470618173646	DNA	CMC-Transib
 Gypsy11_LTR	-0.304519901682671	0.568470618173646	LTR	Gypsy
 Gypsy10_I-int	-0.188834668589015	0.568470618173646	LTR	Gypsy
-Gypsy8_LTR	-0.22930840819102	0.572155988619216	LTR	Gypsy
-MDG1_LTR	-0.222278232633914	0.598330807400729	LTR	Gypsy
-ARS406_DM	-0.253969785738388	0.616310720407917	Unknown	Unknown
-TRANSIB2	-0.146222438911029	0.625405183746989	DNA	CMC-Transib
-Invader3_I-int	-0.138005789457227	0.630870214463397	LTR	Gypsy
-FW2_DM	0.18134923098773	0.631976090646791	LINE	Jockey
+Gypsy8_LTR	-0.22930840819102	0.572155988619062	LTR	Gypsy
+MDG1_LTR	-0.222278232633914	0.598330807400594	LTR	Gypsy
+ARS406_DM	-0.253969785738388	0.616310720408007	Unknown	Unknown
+TRANSIB2	-0.146222438911029	0.625405183746808	DNA	CMC-Transib
+Invader3_I-int	-0.138005789457227	0.63087021446348	LTR	Gypsy
+FW2_DM	0.18134923098773	0.631976090641453	LINE	Jockey
 Gypsy9_LTR	-0.341386719736692	0.637388403082853	LTR	Gypsy
-TART-A	0.137000662462686	0.641582941743804	LINE	Jockey
-PROTOP_A	0.129470019526978	0.641582941743804	DNA	P
-MDG3_LTR	-0.188668582948884	0.653366733777971	LTR	Gypsy
-Invader2_I-int	-0.151224307192946	0.653366733777971	LTR	Gypsy
-Jockey2	-0.162959614427421	0.654568430062825	LINE	Jockey
-POGO	-0.150727724968995	0.655487951512125	DNA	TcMar-Pogo
-Baggins1	-0.134826103211095	0.693165877069107	LINE	LOA
-Stalker3_LTR	-0.174018068430168	0.707635948527927	LTR	Gypsy
-Bica_LTR	-0.203027970314789	0.707635948527927	LTR	Gypsy
-HMSBEAGLE_I-int	0.13884460350775	0.707635948527927	LTR	Gypsy
+TART-A	0.137000662462686	0.641582941744779	LINE	Jockey
+PROTOP_A	0.129470019526978	0.641582941744779	DNA	P
+MDG3_LTR	-0.188668582948884	0.653366733778121	LTR	Gypsy
+Invader2_I-int	-0.151224307192946	0.653366733778121	LTR	Gypsy
+Jockey2	-0.162959614427421	0.6545684300628	LINE	Jockey
+POGO	-0.150727724968995	0.655487951511946	DNA	TcMar-Pogo
+Baggins1	-0.134826103211095	0.693165877070164	LINE	LOA
+Stalker3_LTR	-0.174018068430168	0.707635948527852	LTR	Gypsy
+Bica_LTR	-0.203027970314789	0.707635948527852	LTR	Gypsy
+HMSBEAGLE_I-int	0.13884460350775	0.707635948527852	LTR	Gypsy
 TABOR_LTR	-0.243243320673685	0.7126900116144	LTR	Gypsy
 NTS_DM	-0.176552072990723	0.7126900116144	Other	Other
 ZAM_LTR	0.185889162361338	0.717882303973929	LTR	Gypsy
-G5_DM	-0.112256553949312	0.728328879400811	LINE	Jockey
-QUASIMODO_I-int	0.126271255526405	0.756425760963745	LTR	Gypsy
-FB4_DM	-0.114616335459739	0.756425760963745	DNA	TcMar-Tc1
-Invader1_LTR	0.141219962488351	0.756425760963745	LTR	Gypsy
-BEL_LTR	0.152542861711851	0.756425760963745	LTR	Pao
+G5_DM	-0.112256553949312	0.728328879400999	LINE	Jockey
+QUASIMODO_I-int	0.126271255526405	0.756425760962704	LTR	Gypsy
+FB4_DM	-0.114616335459739	0.756425760962704	DNA	TcMar-Tc1
+Invader1_LTR	0.141219962488351	0.756425760962704	LTR	Gypsy
+BEL_LTR	0.152542861711851	0.756425760962704	LTR	Pao
 DMRT1B	-0.111235216287692	0.760051744799183	LINE	R1
 NOMAD_I-int	-0.137546703453753	0.760051744799183	LTR	Gypsy
-LmeSINE1c	-0.228543531933743	0.76029602974523	SINE	tRNA-Deu-L2
-Gypsy10_LTR	-0.154651074858764	0.762401782894161	LTR	Gypsy
-QUASIMODO2-LTR_DM	-0.155430480903998	0.762401782894161	LTR	Gypsy
-Copia2_LTR_DM	0.147979193864449	0.762401782894161	LTR	Copia
+LmeSINE1c	-0.228543531933743	0.760296029745035	SINE	tRNA-Deu-L2
+Gypsy10_LTR	-0.154651074858764	0.76240178289376	LTR	Gypsy
+QUASIMODO2-LTR_DM	-0.155430480903998	0.76240178289376	LTR	Gypsy
+Copia2_LTR_DM	0.147979193864449	0.76240178289376	LTR	Copia
 BS4_DM	-0.253251631796478	0.81092436860891	LINE	Jockey
 G_DM	0.0902785903431559	0.81092436860891	LINE	Jockey
-IVK_DM	-0.0807211765160779	0.81870908545043	LINE	I
-Gypsy5_I-int	-0.0774807293903186	0.835273508730751	LTR	Gypsy
-Gypsy12_LTR	-0.0832045482918072	0.835273508730751	LTR	Gypsy
-Gypsy6A_LTR	-0.116239966704279	0.835273508730751	LTR	Gypsy
-IDEFIX_I-int	0.0781972363147815	0.835273508730751	LTR	Gypsy
+IVK_DM	-0.0807211765160779	0.818709085450591	LINE	I
+Gypsy5_I-int	-0.0774807293903186	0.835273508731359	LTR	Gypsy
+Gypsy12_LTR	-0.0832045482918072	0.835273508731359	LTR	Gypsy
+Gypsy6A_LTR	-0.116239966704279	0.835273508731359	LTR	Gypsy
+IDEFIX_I-int	0.0781972363147815	0.835273508731359	LTR	Gypsy
 PROTOP_B	-0.0745501769371703	0.846311908195535	DNA	P
 DMRP1	0.100504519100353	0.846311908195535	Unknown	Unknown
-Copia1-LTR_DM	-0.0961752276665428	0.850550157756422	LTR	Copia
-TC1-2_DM	0.0595720035046981	0.853067020850901	DNA	TcMar-Tc1
-LSU-rRNA_Cel	-0.0920825033469626	0.861339242540399	rRNA	rRNA
-Gypsy7_I-int	0.0826410967604942	0.861339242540399	LTR	Gypsy
-Gypsy5_LTR	-0.0710979993807782	0.905487490634908	LTR	Gypsy
-Gypsy4_I-int	-0.0516274039610208	0.905487490634908	LTR	Gypsy
-QUASIMODO_LTR	-0.0643467685962964	0.905487490634908	LTR	Gypsy
-Gypsy2-LTR_DM	0.0652192786223383	0.905487490634908	LTR	Gypsy
-DMLTR5	0.0726894766496021	0.905487490634908	LTR	Gypsy
-Stalker2_LTR	-0.0523210063310555	0.917308330496028	LTR	Gypsy
-ROVER-I_DM	-0.0408110836395496	0.922716163337709	LTR	Gypsy
+Copia1-LTR_DM	-0.0961752276665428	0.850550157756311	LTR	Copia
+TC1-2_DM	0.0595720035046981	0.853067020850826	DNA	TcMar-Tc1
+LSU-rRNA_Cel	-0.0920825033469626	0.861339242519926	rRNA	rRNA
+Gypsy7_I-int	0.0826410967604942	0.861339242519926	LTR	Gypsy
+Gypsy5_LTR	-0.0710979993807782	0.905487490633946	LTR	Gypsy
+Gypsy4_I-int	-0.0516274039610208	0.905487490633946	LTR	Gypsy
+QUASIMODO_LTR	-0.0643467685962964	0.905487490633946	LTR	Gypsy
+Gypsy2-LTR_DM	0.0652192786223383	0.905487490633946	LTR	Gypsy
+DMLTR5	0.0726894766496021	0.905487490633946	LTR	Gypsy
+Stalker2_LTR	-0.0523210063310555	0.917308330496379	LTR	Gypsy
+ROVER-I_DM	-0.0408110836395496	0.922716163337686	LTR	Gypsy
 MDG1_I-int	-0.0411424164719924	0.937452811422426	LTR	Gypsy
 ALA_DM	-0.11425480149938	0.942917068804402	Unknown	Unknown
 DNAREP1_DM	0.039354033592028	0.942917068804402	RC	Helitron
-BARI_DM	0.0372716083617889	0.94985097135805	DNA	TcMar-Tc1
-Gypsy2_I-int	-0.0261599267227275	0.95196577198178	LTR	Gypsy
-DMTOM1_LTR	0.0349640382618226	0.953829042791583	LTR	Gypsy
-IDEFIX_LTR	0.0219961145617681	0.957715681080671	LTR	Gypsy
-STALKER4_I-int	0.0241275307638275	0.957715681080671	LTR	Gypsy
-Gypsy3_LTR	-0.0298883238815861	0.957715681080671	LTR	Gypsy
-MINOS	0.0330479824589295	0.957715681080671	DNA	TcMar-Tc1
-G2_DM	0.0226097987515835	0.962242582650612	LINE	Jockey
-Copia1-I_DM	0.0124236833262227	0.963045943681216	LTR	Copia
-Invader4_LTR	0.016495431966038	0.963045943681216	LTR	Gypsy
-M4DM	-0.0173659751457427	0.963045943681216	DNA	CMC-Transib
+BARI_DM	0.0372716083617889	0.949850971355763	DNA	TcMar-Tc1
+Gypsy2_I-int	-0.0261599267227275	0.951965771983562	LTR	Gypsy
+DMTOM1_LTR	0.0349640382618226	0.953829042793374	LTR	Gypsy
+IDEFIX_LTR	0.0219961145617681	0.957715681080923	LTR	Gypsy
+STALKER4_I-int	0.0241275307638275	0.957715681080923	LTR	Gypsy
+Gypsy3_LTR	-0.0298883238815861	0.957715681080923	LTR	Gypsy
+MINOS	0.0330479824589295	0.957715681080923	DNA	TcMar-Tc1
+G2_DM	0.0226097987515835	0.962242582647045	LINE	Jockey
+Copia1-I_DM	0.0124236833262227	0.963045943681341	LTR	Copia
+Invader4_LTR	0.016495431966038	0.963045943681341	LTR	Gypsy
+M4DM	-0.0173659751457427	0.963045943681341	DNA	CMC-Transib
 BS	0.00565217021634194	0.997858051773989	LINE	Jockey
 FTZ_DM	0	1	Unknown	Unknown
 FUSHI_DM	0	1	Unknown	Unknown