diff test-data/353_fraction_counts.tab @ 1:54a3f3a195d6 draft

planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/repenrich commit 114b47cc624e39b4f485c8623458fc98494c564d
author drosofff
date Mon, 29 May 2017 13:11:57 -0400
parents
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/353_fraction_counts.tab	Mon May 29 13:11:57 2017 -0400
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+LSU-rRNA_Dme	rRNA	rRNA	3078755
+FW3_DM	LINE	Jockey	913
+DMTOM1_LTR	LTR	Gypsy	1012
+R1_DM	LINE	R1	5407
+TAHRE	LINE	Jockey	3914
+G4_DM	LINE	Jockey	3407
+BS	LINE	Jockey	5001
+Stalker2_I-int	LTR	Gypsy	12474
+Stalker3_LTR	LTR	Gypsy	439
+TABOR_I-int	LTR	Gypsy	3081
+G7_DM	LINE	Jockey	98
+BEL_I-int	LTR	Pao	21860
+Gypsy6_I-int	LTR	Gypsy	6746
+ACCORD_I-int	LTR	Gypsy	2165
+DM412B_LTR	LTR	Gypsy	2910
+G2_DM	LINE	Jockey	1132
+SSU-rRNA_Hsa	rRNA	rRNA	172100
+TART_B1	LINE	Jockey	21513
+S2_DM	DNA	TcMar-Tc1	733
+LOOPER1_DM	DNA	PiggyBac	589
+HOBO	DNA	hAT-hobo	4404
+ARS406_DM	Unknown	Unknown	719
+G6_DM	LINE	Jockey	3473
+DOC2_DM	LINE	Jockey	4538
+Baggins1	LINE	LOA	3893
+NINJA_LTR	LTR	Pao	406
+TRANSIB2	DNA	CMC-Transib	3076
+Gypsy5_LTR	LTR	Gypsy	451
+MDG3_LTR	LTR	Gypsy	848
+Gypsy12A_LTR	LTR	Gypsy	2242
+Gypsy_LTR	LTR	Gypsy	917
+TIRANT_LTR	LTR	Gypsy	1279
+I_DM	LINE	I	7013
+DIVER2_I-int	LTR	Pao	5627
+P-1_DY	DNA	P	2
+Invader2_I-int	LTR	Gypsy	5510
+DOC6_DM	LINE	Jockey	1240
+BURDOCK_LTR	LTR	Gypsy	370
+SSU-rRNA_Dme	rRNA	rRNA	4153
+MAX_LTR	LTR	Pao	753
+STALKER4_LTR	LTR	Gypsy	1210
+XDMR_DM	Unknown	Unknown	4328
+BARI_DM	DNA	TcMar-Tc1	902
+Transib-N1_DM	DNA	CMC-Transib	371
+Gypsy5_I-int	LTR	Gypsy	2186
+XDMR	Unknown	Unknown	1440
+ACCORD2_LTR	LTR	Gypsy	192
+POGON1	DNA	TcMar-Pogo	403
+BS4_DM	LINE	Jockey	21
+ALA_DM	Unknown	Unknown	6
+Gypsy1-I_DM	LTR	Gypsy	6297
+ACCORD_LTR	LTR	Gypsy	220
+BURDOCK_I-int	LTR	Gypsy	3332
+ZAM_I-int	LTR	Gypsy	4426
+Invader5_I-int	LTR	Gypsy	335
+G3_DM	LINE	Jockey	556
+ROOA_I-int	LTR	Pao	4589
+Gypsy1-LTR_DM	LTR	Gypsy	795
+DM1731_I-int	LTR	Copia	4881
+ROO_I-int	LTR	Pao	28034
+DM412	LTR	Gypsy	23566
+PROTOP	DNA	P	4353
+TART-A	LINE	Jockey	3408
+ROO_LTR	LTR	Pao	1851
+DIVER_LTR	LTR	Pao	429
+Gypsy3_I-int	LTR	Gypsy	2753
+BATUMI_LTR	LTR	Pao	403
+IDEFIX_LTR	LTR	Gypsy	1844
+G5_DM	LINE	Jockey	2551
+HETA	LINE	Jockey	24397
+Gypsy11_I-int	LTR	Gypsy	560
+R1-2_DM	LINE	R1	177
+Gypsy11_LTR	LTR	Gypsy	149
+HELENA_RT	LINE	Jockey	627
+FTZ_DM	Unknown	Unknown	0
+MICROPIA_I-int	LTR	Gypsy	10355
+Invader4_I-int	LTR	Gypsy	1219
+PLACW_DM	DNA	P	127
+BLOOD_LTR	LTR	Gypsy	746
+R2_DM	LINE	R2	8407
+Copia1-I_DM	LTR	Copia	3518
+Gypsy4_I-int	LTR	Gypsy	10056
+Chouto_LTR	LTR	Gypsy	281
+BATUMI_I-int	LTR	Pao	4789
+DNAREP1_DM	RC	Helitron	63954
+DMRT1B	LINE	R1	7119
+DMRT1C	LINE	R1	2087
+TLD2	LTR	Gypsy	17
+DMRT1A	LINE	R1	3540
+DM1731_LTR	LTR	Copia	440
+LSU-rRNA_Cel	rRNA	rRNA	326925
+Copia_LTR	LTR	Copia	1129
+Gypsy6_LTR	LTR	Gypsy	484
+Gypsy12_I-int	LTR	Gypsy	9627
+BLASTOPIA_LTR	LTR	Gypsy	478
+Bica_LTR	LTR	Gypsy	125
+Gypsy8_LTR	LTR	Gypsy	1241
+NINJA_I-int	LTR	Pao	4503
+PROTOP_B	DNA	P	8285
+PROTOP_A	DNA	P	3384
+Invader3_LTR	LTR	Gypsy	608
+Chimpo_LTR	LTR	Gypsy	120
+Invader2_LTR	LTR	Gypsy	472
+BLASTOPIA_I-int	LTR	Gypsy	9540
+FROGGER_LTR	LTR	Copia	54
+NOMAD_I-int	LTR	Gypsy	11594
+QUASIMODO_LTR	LTR	Gypsy	1174
+TABOR_LTR	LTR	Gypsy	273
+Stalker2_LTR	LTR	Gypsy	672
+MICROPIA_LTR	LTR	Gypsy	863
+Gypsy9_I-int	LTR	Gypsy	474
+STALKER4_I-int	LTR	Gypsy	5741
+TRANSIB1	DNA	CMC-Transib	2116
+DOC	LINE	Jockey	16414
+TRANSIB3	DNA	CMC-Transib	1132
+Copia_I-int	LTR	Copia	26733
+TRANSIB4	DNA	CMC-Transib	571
+Gypsy10_LTR	LTR	Gypsy	368
+Invader3_I-int	LTR	Gypsy	3722
+Invader1_I-int	LTR	Gypsy	1672
+BS3_DM	LINE	Jockey	877
+Gypsy2-LTR_DM	LTR	Gypsy	690
+LSU-rRNA_Hsa	rRNA	rRNA	0
+NOMAD_LTR	LTR	Gypsy	822
+Helitron1_DM	RC	Helitron	6
+LINEJ1_DM	LINE	Jockey	6329
+Invader4_LTR	LTR	Gypsy	1228
+MDG3_I-int	LTR	Gypsy	4971
+LmeSINE1c	SINE	tRNA-Deu-L2	1414
+ROVER-LTR_DM	LTR	Gypsy	415
+S_DM	DNA	TcMar-Tc1	3476
+Invader6_I-int	LTR	Gypsy	6701
+ROVER-I_DM	LTR	Gypsy	5589
+QUASIMODO_I-int	LTR	Gypsy	13018
+Chouto_I-int	LTR	Gypsy	1304
+NTS_DM	Other	Other	36205
+Gypsy3_LTR	LTR	Gypsy	447
+SSU-rRNA_Cel	rRNA	rRNA	2183
+MINOS	DNA	TcMar-Tc1	226
+DOC4_DM	LINE	Jockey	830
+ZAM_LTR	LTR	Gypsy	225
+QUASIMODO2-LTR_DM	LTR	Gypsy	200
+Gypsy2-I_DM	LTR	Gypsy	3896
+TRANSPAC_I-int	LTR	Gypsy	14982
+Bica_I-int	LTR	Gypsy	1390
+BS2	LINE	Jockey	4991
+BLOOD_I-int	LTR	Gypsy	17222
+DMCR1A	LINE	CR1	17957
+QUASIMODO2-I_DM	LTR	Gypsy	2225
+HMSBEAGLE_I-int	LTR	Gypsy	5908
+DMLTR5	LTR	Gypsy	160
+Gypsy7_LTR	LTR	Gypsy	87
+G5A_DM	LINE	Jockey	1595
+MDG1_I-int	LTR	Gypsy	13740
+Gypsy2_I-int	LTR	Gypsy	3453
+BARI1	DNA	TcMar-Tc1	322
+Invader5_LTR	LTR	Gypsy	64
+DM176_LTR	LTR	Gypsy	872
+DOC3_DM	LINE	Jockey	10659
+Copia1-LTR_DM	LTR	Copia	566
+TOM_I-int	LTR	Gypsy	2311
+NOF_FB	DNA	MULE-NOF	960
+Chimpo_I-int	LTR	Gypsy	1060
+DIVER_I-int	LTR	Pao	15627
+TIRANT_I-int	LTR	Gypsy	8559
+Gypsy2_LTR	LTR	Gypsy	485
+FB4_DM	DNA	TcMar-Tc1	6939
+GTWIN_LTR	LTR	Gypsy	467
+Invader6_LTR	LTR	Gypsy	588
+Gypsy8_I-int	LTR	Gypsy	4083
+G_DM	LINE	Jockey	8035
+TRANSPAC_LTR	LTR	Gypsy	555
+FUSHI_DM	Unknown	Unknown	0
+Transib5	DNA	CMC-Transib	965
+MuDR-1_DEl	DNA	MULE-NOF	9
+Mariner2_DM	DNA	TcMar-Tc1	1591
+DOC5_DM	LINE	Jockey	2183
+TC1_DM	DNA	TcMar-Tc1	1960
+Gypsy9_LTR	LTR	Gypsy	42
+DMRP1	Unknown	Unknown	227
+Gypsy10_I-int	LTR	Gypsy	1930
+Gypsy4_LTR	LTR	Gypsy	194
+DM297_LTR	LTR	Gypsy	1478
+ACCORD2_I-int	LTR	Gypsy	2458
+Invader1_LTR	LTR	Gypsy	1931
+BEL_LTR	LTR	Pao	858
+IVK_DM	LINE	I	2921
+M4DM	DNA	CMC-Transib	1650
+FW2_DM	LINE	Jockey	13847
+Copia2_I-int	LTR	Copia	3455
+MDG1_LTR	LTR	Gypsy	582
+Gypsy12_LTR	LTR	Gypsy	5934
+Gypsy7_I-int	LTR	Gypsy	1009
+FROGGER_I-int	LTR	Copia	1361
+Gypsy_I-int	LTR	Gypsy	5634
+5S_DM	RNA	RNA	10392
+GTWIN_I-int	LTR	Gypsy	5054
+CIRCE	LTR	Gypsy	3323
+DIVER2_LTR	LTR	Pao	535
+POGO	DNA	TcMar-Pogo	2492
+Gypsy6A_LTR	LTR	Gypsy	573
+MAX_I-int	LTR	Pao	9201
+ROOA_LTR	LTR	Pao	483
+DM176_I-int	LTR	Gypsy	2813
+Copia2_LTR_DM	LTR	Copia	486
+DM297_I-int	LTR	Gypsy	11530
+IDEFIX_I-int	LTR	Gypsy	5547
+Jockey2	LINE	Jockey	1588
+TC1-2_DM	DNA	TcMar-Tc1	3948
+DMRPR	Unknown	Unknown	187