diff test-data/356_fraction_counts.tab @ 1:54a3f3a195d6 draft

planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/repenrich commit 114b47cc624e39b4f485c8623458fc98494c564d
author drosofff
date Mon, 29 May 2017 13:11:57 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/356_fraction_counts.tab	Mon May 29 13:11:57 2017 -0400
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+LSU-rRNA_Dme	rRNA	rRNA	5583038
+FW3_DM	LINE	Jockey	647
+DMTOM1_LTR	LTR	Gypsy	1403
+R1_DM	LINE	R1	15424
+TAHRE	LINE	Jockey	3806
+G4_DM	LINE	Jockey	2223
+BS	LINE	Jockey	5200
+Stalker2_I-int	LTR	Gypsy	10966
+Stalker3_LTR	LTR	Gypsy	543
+TABOR_I-int	LTR	Gypsy	5504
+G7_DM	LINE	Jockey	1949
+BEL_I-int	LTR	Pao	29338
+Gypsy6_I-int	LTR	Gypsy	11381
+ACCORD_I-int	LTR	Gypsy	4103
+DM412B_LTR	LTR	Gypsy	5607
+G2_DM	LINE	Jockey	1235
+SSU-rRNA_Hsa	rRNA	rRNA	563673
+TART_B1	LINE	Jockey	13382
+S2_DM	DNA	TcMar-Tc1	716
+LOOPER1_DM	DNA	PiggyBac	220
+HOBO	DNA	hAT-hobo	4375
+ARS406_DM	Unknown	Unknown	755
+G6_DM	LINE	Jockey	2874
+DOC2_DM	LINE	Jockey	4511
+Baggins1	LINE	LOA	5500
+NINJA_LTR	LTR	Pao	297
+TRANSIB2	DNA	CMC-Transib	3357
+Gypsy5_LTR	LTR	Gypsy	502
+MDG3_LTR	LTR	Gypsy	926
+Gypsy12A_LTR	LTR	Gypsy	2436
+Gypsy_LTR	LTR	Gypsy	3771
+TIRANT_LTR	LTR	Gypsy	3225
+I_DM	LINE	I	11479
+DIVER2_I-int	LTR	Pao	6446
+P-1_DY	DNA	P	13
+Invader2_I-int	LTR	Gypsy	5970
+DOC6_DM	LINE	Jockey	1718
+BURDOCK_LTR	LTR	Gypsy	543
+SSU-rRNA_Dme	rRNA	rRNA	9958
+MAX_LTR	LTR	Pao	958
+STALKER4_LTR	LTR	Gypsy	2040
+XDMR_DM	Unknown	Unknown	4049
+BARI_DM	DNA	TcMar-Tc1	1117
+Transib-N1_DM	DNA	CMC-Transib	366
+Gypsy5_I-int	LTR	Gypsy	2834
+XDMR	Unknown	Unknown	1771
+ACCORD2_LTR	LTR	Gypsy	213
+POGON1	DNA	TcMar-Pogo	641
+BS4_DM	LINE	Jockey	8
+ALA_DM	Unknown	Unknown	9
+Gypsy1-I_DM	LTR	Gypsy	36962
+ACCORD_LTR	LTR	Gypsy	790
+BURDOCK_I-int	LTR	Gypsy	5190
+ZAM_I-int	LTR	Gypsy	6896
+Invader5_I-int	LTR	Gypsy	191
+G3_DM	LINE	Jockey	480
+ROOA_I-int	LTR	Pao	4103
+Gypsy1-LTR_DM	LTR	Gypsy	1432
+DM1731_I-int	LTR	Copia	18829
+ROO_I-int	LTR	Pao	34023
+DM412	LTR	Gypsy	43689
+PROTOP	DNA	P	4775
+TART-A	LINE	Jockey	5092
+ROO_LTR	LTR	Pao	2219
+DIVER_LTR	LTR	Pao	547
+Gypsy3_I-int	LTR	Gypsy	5766
+BATUMI_LTR	LTR	Pao	348
+IDEFIX_LTR	LTR	Gypsy	2538
+G5_DM	LINE	Jockey	2714
+HETA	LINE	Jockey	22459
+Gypsy11_I-int	LTR	Gypsy	487
+R1-2_DM	LINE	R1	184
+Gypsy11_LTR	LTR	Gypsy	159
+HELENA_RT	LINE	Jockey	934
+FTZ_DM	Unknown	Unknown	0
+MICROPIA_I-int	LTR	Gypsy	6941
+Invader4_I-int	LTR	Gypsy	1888
+PLACW_DM	DNA	P	277
+BLOOD_LTR	LTR	Gypsy	1269
+R2_DM	LINE	R2	54042
+Copia1-I_DM	LTR	Copia	4100
+Gypsy4_I-int	LTR	Gypsy	13114
+Chouto_LTR	LTR	Gypsy	162
+BATUMI_I-int	LTR	Pao	4723
+DNAREP1_DM	RC	Helitron	76851
+DMRT1B	LINE	R1	9003
+DMRT1C	LINE	R1	1907
+TLD2	LTR	Gypsy	33
+DMRT1A	LINE	R1	3797
+DM1731_LTR	LTR	Copia	1274
+LSU-rRNA_Cel	rRNA	rRNA	363697
+Copia_LTR	LTR	Copia	2612
+Gypsy6_LTR	LTR	Gypsy	1423
+Gypsy12_I-int	LTR	Gypsy	5002
+BLASTOPIA_LTR	LTR	Gypsy	1038
+Bica_LTR	LTR	Gypsy	123
+Gypsy8_LTR	LTR	Gypsy	1467
+NINJA_I-int	LTR	Pao	3676
+PROTOP_B	DNA	P	9371
+PROTOP_A	DNA	P	4465
+Invader3_LTR	LTR	Gypsy	506
+Chimpo_LTR	LTR	Gypsy	107
+Invader2_LTR	LTR	Gypsy	417
+BLASTOPIA_I-int	LTR	Gypsy	13780
+FROGGER_LTR	LTR	Copia	85
+NOMAD_I-int	LTR	Gypsy	11614
+QUASIMODO_LTR	LTR	Gypsy	1625
+TABOR_LTR	LTR	Gypsy	443
+Stalker2_LTR	LTR	Gypsy	790
+MICROPIA_LTR	LTR	Gypsy	460
+Gypsy9_I-int	LTR	Gypsy	429
+STALKER4_I-int	LTR	Gypsy	7287
+TRANSIB1	DNA	CMC-Transib	1229
+DOC	LINE	Jockey	29082
+TRANSIB3	DNA	CMC-Transib	1802
+Copia_I-int	LTR	Copia	50888
+TRANSIB4	DNA	CMC-Transib	364
+Gypsy10_LTR	LTR	Gypsy	363
+Invader3_I-int	LTR	Gypsy	4411
+Invader1_I-int	LTR	Gypsy	2993
+BS3_DM	LINE	Jockey	851
+Gypsy2-LTR_DM	LTR	Gypsy	1155
+LSU-rRNA_Hsa	rRNA	rRNA	15
+NOMAD_LTR	LTR	Gypsy	757
+Helitron1_DM	RC	Helitron	0
+LINEJ1_DM	LINE	Jockey	24891
+Invader4_LTR	LTR	Gypsy	1624
+MDG3_I-int	LTR	Gypsy	7857
+LmeSINE1c	SINE	tRNA-Deu-L2	627
+ROVER-LTR_DM	LTR	Gypsy	415
+S_DM	DNA	TcMar-Tc1	4974
+Invader6_I-int	LTR	Gypsy	6566
+ROVER-I_DM	LTR	Gypsy	6947
+QUASIMODO_I-int	LTR	Gypsy	17910
+Chouto_I-int	LTR	Gypsy	1231
+NTS_DM	Other	Other	56043
+Gypsy3_LTR	LTR	Gypsy	681
+SSU-rRNA_Cel	rRNA	rRNA	3855
+MINOS	DNA	TcMar-Tc1	273
+DOC4_DM	LINE	Jockey	1030
+ZAM_LTR	LTR	Gypsy	377
+QUASIMODO2-LTR_DM	LTR	Gypsy	298
+Gypsy2-I_DM	LTR	Gypsy	7374
+TRANSPAC_I-int	LTR	Gypsy	28474
+Bica_I-int	LTR	Gypsy	1561
+BS2	LINE	Jockey	5214
+BLOOD_I-int	LTR	Gypsy	27362
+DMCR1A	LINE	CR1	17489
+QUASIMODO2-I_DM	LTR	Gypsy	3977
+HMSBEAGLE_I-int	LTR	Gypsy	7863
+DMLTR5	LTR	Gypsy	189
+Gypsy7_LTR	LTR	Gypsy	80
+G5A_DM	LINE	Jockey	1578
+MDG1_I-int	LTR	Gypsy	16306
+Gypsy2_I-int	LTR	Gypsy	4226
+BARI1	DNA	TcMar-Tc1	370
+Invader5_LTR	LTR	Gypsy	47
+DM176_LTR	LTR	Gypsy	560
+DOC3_DM	LINE	Jockey	11067
+Copia1-LTR_DM	LTR	Copia	600
+TOM_I-int	LTR	Gypsy	6929
+NOF_FB	DNA	MULE-NOF	228
+Chimpo_I-int	LTR	Gypsy	1366
+DIVER_I-int	LTR	Pao	24742
+TIRANT_I-int	LTR	Gypsy	23165
+Gypsy2_LTR	LTR	Gypsy	869
+FB4_DM	DNA	TcMar-Tc1	7840
+GTWIN_LTR	LTR	Gypsy	2533
+Invader6_LTR	LTR	Gypsy	312
+Gypsy8_I-int	LTR	Gypsy	4176
+G_DM	LINE	Jockey	10948
+TRANSPAC_LTR	LTR	Gypsy	1457
+FUSHI_DM	Unknown	Unknown	0
+Transib5	DNA	CMC-Transib	973
+MuDR-1_DEl	DNA	MULE-NOF	32
+Mariner2_DM	DNA	TcMar-Tc1	1096
+DOC5_DM	LINE	Jockey	1793
+TC1_DM	DNA	TcMar-Tc1	2618
+Gypsy9_LTR	LTR	Gypsy	62
+DMRP1	Unknown	Unknown	295
+Gypsy10_I-int	LTR	Gypsy	2236
+Gypsy4_LTR	LTR	Gypsy	390
+DM297_LTR	LTR	Gypsy	6128
+ACCORD2_I-int	LTR	Gypsy	2286
+Invader1_LTR	LTR	Gypsy	2525
+BEL_LTR	LTR	Pao	927
+IVK_DM	LINE	I	3025
+M4DM	DNA	CMC-Transib	1880
+FW2_DM	LINE	Jockey	17723
+Copia2_I-int	LTR	Copia	3614
+MDG1_LTR	LTR	Gypsy	650
+Gypsy12_LTR	LTR	Gypsy	7572
+Gypsy7_I-int	LTR	Gypsy	1162
+FROGGER_I-int	LTR	Copia	1075
+Gypsy_I-int	LTR	Gypsy	24082
+5S_DM	RNA	RNA	6331
+GTWIN_I-int	LTR	Gypsy	7568
+CIRCE	LTR	Gypsy	3676
+DIVER2_LTR	LTR	Pao	648
+POGO	DNA	TcMar-Pogo	2909
+Gypsy6A_LTR	LTR	Gypsy	793
+MAX_I-int	LTR	Pao	8914
+ROOA_LTR	LTR	Pao	435
+DM176_I-int	LTR	Gypsy	4726
+Copia2_LTR_DM	LTR	Copia	747
+DM297_I-int	LTR	Gypsy	82387
+IDEFIX_I-int	LTR	Gypsy	7222
+Jockey2	LINE	Jockey	1823
+TC1-2_DM	DNA	TcMar-Tc1	4438
+DMRPR	Unknown	Unknown	221