Mercurial > repos > drosofff > sam_to_fastq

diff sam_to_fastq.py @ 1:8acb72264319 draft default tip

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sam_to_fastq commit 55671fc041c29c7985cbb44e6b49a10e1889f907
author drosofff
date Mon, 21 Mar 2016 18:03:40 -0400
parents 55107d4a728c
children
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--- a/sam_to_fastq.py	Mon Mar 21 17:33:26 2016 -0400
+++ b/sam_to_fastq.py	Mon Mar 21 18:03:40 2016 -0400
@@ -15,7 +15,7 @@
         
 def print_fastq_sequence(samline, file):
   samfields = samline[:-1].split("\t")
-  file.write ( '@%s\n%s\n+\n%s' % (samfields[0], samfields[9], samfields[10]) )
+  file.write ( '@%s\n%s\n+\n%s\n' % (samfields[0], samfields[9], samfields[10]) )
 
 def main(input, output):
     infile = open (input, "r")