# HG changeset patch # User drosofff # Date 1441293892 14400 # Node ID 91cce7c1436d67543598217d7dca07670095779b # Parent 8a8f62b4bf272189b938e5c805f3888d989486f4 planemo upload for repository https://bitbucket.org/drosofff/gedtools/ commit ce185c8eaa7a15cb400b3bd0cedb56efedb0e99f diff -r 8a8f62b4bf27 -r 91cce7c1436d README.txt --- a/README.txt Wed Jun 24 17:06:30 2015 -0400 +++ b/README.txt Thu Sep 03 11:24:52 2015 -0400 @@ -8,4 +8,4 @@ Note that unclipped reads that satisfy the min and max size conditions are kept. Homepage: drosophile.org - +Repositoy development: https://bitbucket.org/drosofff/gedtools/ diff -r 8a8f62b4bf27 -r 91cce7c1436d yac.xml --- a/yac.xml Wed Jun 24 17:06:30 2015 -0400 +++ b/yac.xml Thu Sep 03 11:24:52 2015 -0400 @@ -1,4 +1,4 @@ - + yac.py --input $input --output $output @@ -70,7 +70,7 @@ This tool clips adapter sequences from a fastq file and outputs either a fasta or fastq file of clipped reads with renumbered fasta/fastq headers. -By defualt clipped sequences with unknown nucleotides are kept, but +By default clipped sequences with unknown nucleotides are kept, but can be discarded by setting "Accept reads containing N?" to reject. Min size and max size filter clipped reads on their size.