Mercurial > repos > earlhaminst > blast_parser
changeset 0:87eda806422d draft
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/blast_parser commit 75c6b4d9bd23cdd5f8e5626b1b01f2abba32c274-dirty
| author | earlhaminst |
|---|---|
| date | Mon, 12 Dec 2016 07:13:57 -0500 |
| parents | |
| children | fd11653657f9 |
| files | blast_parser.pl blast_parser.xml test-data/input.tabular test-data/output.tabular |
| diffstat | 4 files changed, 560 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/blast_parser.pl Mon Dec 12 07:13:57 2016 -0500 @@ -0,0 +1,43 @@ +#!/usr/bin/perl +use strict; +use warnings; +use List::Util qw(min max); + +# A simple Perl parser to convert a BLAST 12-column or 24-column output into a +# 3-column input for hcluster_hg (id1, id2, weight): +# parse_blast.pl <file> + +use constant LOG_E_10 => log(10); + +my $file1 = $ARGV[0]; +open my $fh1, '<', $file1; + +while (my $line = <$fh1>) { + my @row = split(/\t/, $line); + + if ($row[0] eq $row[1]) { + # ignore self matching hits + } else { + # Convert evalue to an integer weight with max 100 + my $weight = 100; + + #if the evalue is 0, leave weight at 100 + if ($row[10] != 0 && $row[10] != 0.0) { + $weight = min(100, positive_round(-1 * log10($row[10]))); + } + print"$row[0]\t$row[1]\t$weight\n"; + } +} +close $fh1; + +# Calculate logarithm to base 10 of a number +sub log10 { + my $n = shift; + return log($n) / LOG_E_10; +} + +# Round a positive float to the nearest integer +sub positive_round{ + my $n = shift; + return int($n + 0.5); +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/blast_parser.xml Mon Dec 12 07:13:57 2016 -0500 @@ -0,0 +1,35 @@ +<tool id="blast_parser" name="blast_parser" version="0.1.1"> + <description> + Convert 12- or 24-column BLAST output into 3-column hcluster_sg input + </description> + + <command> +<![CDATA[ +perl $__tool_directory__/blast_parser.pl +$input +> $output +]]> + </command> + + <inputs> + <param name="input" type="data" format="tabular" label="Tabular data" help="BLAST 12 column tabular format data"/> + </inputs> + + <outputs> + <data name="output" format="tabular" label="$tool.name on ${on_string}" /> + </outputs> + + <tests> + <test> + <param name="input" ftype="tabular" value="input.tabular" /> + <output name="output" file="output.tabular" /> + </test> + </tests> + <help> +<![CDATA[ +Simple tool to convert a 12- or 24-column BLAST output into a 3-column format (qseqid, sseqid, round(-1 * log10(evalue))) usable as input for the hcluster_sg tool. +]]> + </help> + <citations> + </citations> +</tool>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/input.tabular Mon Dec 12 07:13:57 2016 -0500 @@ -0,0 +1,321 @@ +ENSFCAT00000013089_feliscatus_1 ENSFCAT00000013089_feliscatus_1 100.00 528 0 0 1 528 1 528 0.0 1098 +ENSFCAT00000013089_feliscatus_1 ENSCAFT00000022939_canisfamiliaris_1 92.80 528 38 0 1 528 1 528 0.0 1035 +ENSCAFT00000022939_canisfamiliaris_1 ENSCAFT00000022939_canisfamiliaris_1 100.00 528 0 0 1 528 1 528 0.0 1099 +ENSCAFT00000022939_canisfamiliaris_1 ENSFCAT00000013089_feliscatus_1 92.80 528 38 0 1 528 1 528 0.0 1035 +ENSAMXT00000002585_astyanaxmexicanus_1 ENSAMXT00000002585_astyanaxmexicanus_1 100.00 523 0 0 1 523 1 523 0.0 1087 +ENSAMXT00000002585_astyanaxmexicanus_1 ENSDART00000028225_daniorerio_1 89.67 523 54 0 1 523 1 523 0.0 987 +ENSPCAT00000008534_procaviacapensis_1 ENSPCAT00000008534_procaviacapensis_1 100.00 502 0 0 1 502 1 502 0.0 839 +ENSPCAT00000008534_procaviacapensis_1 ENST00000378069_homosapiens_1 77.61 469 103 2 35 501 1 469 0.0 733 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515 31 0 5 519 14 528 0.0 1014 +ENSDORT00000003971_dipodomysordii_1 ENSDORT00000003971_dipodomysordii_1 100.00 526 0 0 1 526 1 526 0.0 1055 +ENSDORT00000003971_dipodomysordii_1 ENSSTOT00000004965_ictidomystridecemlineatus_1 87.64 526 63 2 1 524 1 526 0.0 963 +ENSVPAT00000000658_vicugnapacos_1 ENSVPAT00000000658_vicugnapacos_1 100.00 454 0 0 1 454 1 454 0.0 897 +ENSVPAT00000000658_vicugnapacos_1 ENSCAFT00000022963_canisfamiliaris_1 89.43 454 48 0 1 454 17 470 0.0 851 +ENSLACT00000009516_latimeriachalumnae_1 ENSLACT00000009516_latimeriachalumnae_1 100.00 418 0 0 1 418 1 418 0.0 871 +ENSLACT00000009516_latimeriachalumnae_1 ENSLOCT00000017020_lepisosteusoculatus_1 81.97 416 73 2 3 418 9 422 0.0 732 +ENSLACT00000014694_latimeriachalumnae_1 ENSLACT00000014694_latimeriachalumnae_1 100.00 463 0 0 1 463 1 463 0.0 959 +ENSLACT00000014694_latimeriachalumnae_1 ENSLACT00000014695_latimeriachalumnae_1 99.77 436 1 0 17 452 12 447 0.0 908 +ENSLACT00000014695_latimeriachalumnae_1 ENSLACT00000014695_latimeriachalumnae_1 100.00 519 0 0 1 519 1 519 0.0 1077 +ENSLACT00000014695_latimeriachalumnae_1 ENSLACT00000026689_latimeriachalumnae_1 87.08 511 59 3 12 519 17 523 0.0 923 +ENSXMAT00000006977_xiphophorusmaculatus_1 ENSXMAT00000006977_xiphophorusmaculatus_1 100.00 507 0 0 1 507 1 507 0.0 1054 +ENSXMAT00000006977_xiphophorusmaculatus_1 ENSPFOT00000009022_poeciliaformosa_1 80.82 511 92 4 1 507 59 567 0.0 823 +ENSVPAT00000000657_vicugnapacos_1 ENSVPAT00000000657_vicugnapacos_1 100.00 528 0 0 1 528 1 528 0.0 1021 +ENSVPAT00000000657_vicugnapacos_1 ENSSSCT00000013404_susscrofa_1 84.85 528 80 0 1 528 1 528 0.0 934 +ENSDART00000028225_daniorerio_1 ENSDART00000028225_daniorerio_1 100.00 523 0 0 1 523 1 523 0.0 1087 +ENSDART00000028225_daniorerio_1 ENSAMXT00000002585_astyanaxmexicanus_1 89.67 523 54 0 1 523 1 523 0.0 982 +ENSXETT00000010504_xenopustropicalis_1 ENSXETT00000010504_xenopustropicalis_1 100.00 507 0 0 1 507 1 507 0.0 1051 +ENSXETT00000010504_xenopustropicalis_1 ENSAPLT00000013117_anasplatyrhynchos_1 81.85 507 92 0 1 507 15 521 0.0 894 +ENSPANT00000027631_papioanubis_1 ENSPANT00000027631_papioanubis_1 100.00 513 0 0 1 513 1 513 0.0 1065 +ENSPANT00000027631_papioanubis_1 ENSMMUT00000027387_macacamulatta_1 99.80 505 1 0 9 513 2 506 0.0 1046 +ENSMUST00000026013_musmusculus_1 ENSMUST00000026013_musmusculus_1 100.00 527 0 0 1 527 1 527 0.0 1093 +ENSMUST00000026013_musmusculus_1 ENSRNOT00000066674_rattusnorvegicus_1 95.98 523 21 0 1 523 1 523 0.0 1055 +ENSACAT00000017988_anoliscarolinensis_1 ENSACAT00000017988_anoliscarolinensis_1 100.00 524 0 0 1 524 1 524 0.0 1091 +ENSACAT00000017988_anoliscarolinensis_1 ENSAPLT00000013117_anasplatyrhynchos_1 85.58 513 73 1 13 524 9 521 0.0 920 +ENSDNOT00000036768_dasypusnovemcinctus_1 ENSDNOT00000036768_dasypusnovemcinctus_1 100.00 416 0 0 1 416 1 416 0.0 863 +ENSDNOT00000036768_dasypusnovemcinctus_1 ENSCAFT00000022963_canisfamiliaris_1 93.93 379 23 0 1 379 1 379 0.0 747 +ENSOGAT00000005620_otolemurgarnettii_1 ENSOGAT00000005620_otolemurgarnettii_1 100.00 505 0 0 1 505 1 505 0.0 1048 +ENSOGAT00000005620_otolemurgarnettii_1 ENSECAT00000001417_equuscaballus_1 91.88 505 41 0 1 505 17 521 0.0 977 +ENSDNOT00000039756_dasypusnovemcinctus_1 ENSDNOT00000039756_dasypusnovemcinctus_1 100.00 576 0 0 1 576 1 576 0.0 1173 +ENSDNOT00000039756_dasypusnovemcinctus_1 ENSPANT00000027701_papioanubis_1 55.79 674 177 12 18 576 78 745 0.0 641 +ENSGACT00000012444_gasterosteusaculeatus_1 ENSGACT00000012444_gasterosteusaculeatus_1 100.00 531 0 0 1 531 1 531 0.0 1100 +ENSGACT00000012444_gasterosteusaculeatus_1 ENSPFOT00000009022_poeciliaformosa_1 85.36 526 77 0 6 531 42 567 0.0 949 +ENSONIT00000016435_oreochromisniloticus_1 ENSONIT00000016435_oreochromisniloticus_1 100.00 543 0 0 1 543 1 543 0.0 1127 +ENSONIT00000016435_oreochromisniloticus_1 ENSXMAT00000001796_xiphophorusmaculatus_1 77.32 529 120 0 1 529 1 529 0.0 845 +ENSETET00000017262_echinopstelfairi_1 ENSETET00000017262_echinopstelfairi_1 100.00 520 0 0 1 520 1 520 0.0 1019 +ENSETET00000017262_echinopstelfairi_1 ENSCAFT00000022963_canisfamiliaris_1 87.33 521 65 1 1 520 1 521 0.0 941 +ENSDORT00000011171_dipodomysordii_1 ENSDORT00000011171_dipodomysordii_1 100.00 548 0 0 1 548 1 548 0.0 950 +ENSDORT00000011171_dipodomysordii_1 ENSCAFT00000022963_canisfamiliaris_1 78.93 522 109 1 27 548 1 521 0.0 836 +ENSTNIT00000014720_tetraodonnigroviridis_1 ENSTNIT00000014720_tetraodonnigroviridis_1 100.00 524 0 0 1 524 1 524 0.0 1090 +ENSTNIT00000014720_tetraodonnigroviridis_1 ENSTRUT00000035430_takifugurubripes_1 88.57 525 58 2 1 524 9 532 0.0 975 +ENSCJAT00000058575_callithrixjacchus_1 ENSCJAT00000021080_callithrixjacchus_1 100.00 505 0 0 1 505 1 505 0.0 1045 +ENSCJAT00000058575_callithrixjacchus_1 ENSCJAT00000058575_callithrixjacchus_1 100.00 505 0 0 1 505 1 505 0.0 1045 +ENSCSAT00000012027_chlorocebussabaeus_1 ENSCSAT00000012027_chlorocebussabaeus_1 100.00 521 0 0 1 521 1 521 0.0 1079 +ENSCSAT00000012027_chlorocebussabaeus_1 ENSGGOT00000000206_gorillagorilla_1 98.85 521 6 0 1 521 1 521 0.0 1071 +ENSCPOT00000001038_caviaporcellus_1 ENSCPOT00000001038_caviaporcellus_1 100.00 510 0 0 1 510 1 510 0.0 1056 +ENSCPOT00000001038_caviaporcellus_1 ENSSTOT00000004965_ictidomystridecemlineatus_1 81.80 511 86 4 1 510 24 528 0.0 849 +ENSCPOT00000001039_caviaporcellus_1 ENSCPOT00000001039_caviaporcellus_1 100.00 489 0 0 1 489 1 489 0.0 1012 +ENSCPOT00000001039_caviaporcellus_1 ENSCPOT00000001038_caviaporcellus_1 85.86 488 47 3 24 489 1 488 0.0 833 +ENSMPUT00000012840_mustelaputoriusfuro_1 ENSMPUT00000012840_mustelaputoriusfuro_1 100.00 522 0 0 1 522 1 522 0.0 1080 +ENSMPUT00000012840_mustelaputoriusfuro_1 ENSAMET00000018029_ailuropodamelanoleuca_1 83.87 527 75 3 1 522 1 522 0.0 894 +ENSSTOT00000004965_ictidomystridecemlineatus_1 ENSSTOT00000004965_ictidomystridecemlineatus_1 100.00 528 0 0 1 528 1 528 0.0 1097 +ENSSTOT00000004965_ictidomystridecemlineatus_1 ENSECAT00000024641_equuscaballus_1 91.10 528 47 0 1 528 1 528 0.0 1023 +ENSMLUT00000001440_myotislucifugus_1 ENSMLUT00000001440_myotislucifugus_1 100.00 531 0 0 1 531 1 531 0.0 1103 +ENSMLUT00000001440_myotislucifugus_1 ENSPANT00000027606_papioanubis_1 89.81 530 54 0 2 531 2 531 0.0 996 +ENSORLT00000017214_oryziaslatipes_1 ENSORLT00000017214_oryziaslatipes_1 100.00 519 0 0 1 519 1 519 0.0 1074 +ENSORLT00000017214_oryziaslatipes_1 ENSPFOT00000009022_poeciliaformosa_1 84.42 520 76 2 5 519 48 567 0.0 911 +ENSMUST00000163344_musmusculus_1 ENSMUST00000163344_musmusculus_1 100.00 113 0 0 1 113 1 113 3e-80 229 +ENSMUST00000163344_musmusculus_1 ENSMUST00000168613_musmusculus_1 88.89 108 12 0 1 108 1 108 2e-63 189 +ENSACAT00000017993_anoliscarolinensis_1 ENSACAT00000017993_anoliscarolinensis_1 100.00 524 0 0 1 524 1 524 0.0 1088 +ENSACAT00000017993_anoliscarolinensis_1 ENSPSIT00000017443_pelodiscussinensis_1 78.34 517 112 0 1 517 1 517 0.0 842 +ENSCJAT00000021080_callithrixjacchus_1 ENSCJAT00000021080_callithrixjacchus_1 100.00 505 0 0 1 505 1 505 0.0 1045 +ENSCJAT00000021080_callithrixjacchus_1 ENSCJAT00000058575_callithrixjacchus_1 100.00 505 0 0 1 505 1 505 0.0 1045 +ENSOPRT00000000678_ochotonaprinceps_1 ENSOPRT00000000678_ochotonaprinceps_1 100.00 256 0 0 114 369 114 369 2e-157 445 +ENSOPRT00000000678_ochotonaprinceps_1 ENSOPRT00000000678_ochotonaprinceps_1 100.00 35 0 0 1 35 1 35 6e-20 83.6 +ENSOPRT00000000678_ochotonaprinceps_1 ENSOGAT00000030491_otolemurgarnettii_1 78.60 257 54 1 114 369 193 449 9e-143 413 +ENSOPRT00000000678_ochotonaprinceps_1 ENSOGAT00000030491_otolemurgarnettii_1 97.14 35 1 0 1 35 80 114 3e-19 82.4 +ENSMMUT00000027384_macacamulatta_1 ENSPANT00000027701_papioanubis_1 98.89 359 4 0 1 359 622 980 0.0 756 +ENSMMUT00000027384_macacamulatta_1 ENSMMUT00000027384_macacamulatta_1 100.00 361 0 0 1 361 1 361 0.0 753 +ENSMMUT00000027387_macacamulatta_1 ENSMMUT00000027387_macacamulatta_1 100.00 506 0 0 1 506 1 506 0.0 1048 +ENSMMUT00000027387_macacamulatta_1 ENSPANT00000027631_papioanubis_1 99.80 505 1 0 2 506 9 513 0.0 1046 +ENSLOCT00000019886_lepisosteusoculatus_1 ENSLOCT00000019886_lepisosteusoculatus_1 100.00 537 0 0 1 537 1 537 0.0 1105 +ENSLOCT00000019886_lepisosteusoculatus_1 ENSDART00000160057_daniorerio_1 59.45 508 206 0 4 511 6 513 0.0 665 +ENSLAFT00000015029_loxodontaafricana_1 ENSLAFT00000015029_loxodontaafricana_1 100.00 517 0 0 1 517 1 517 0.0 1075 +ENSLAFT00000015029_loxodontaafricana_1 ENSCAFT00000022963_canisfamiliaris_1 92.65 517 38 0 1 517 1 517 0.0 1011 +ENSEEUT00000006031_erinaceuseuropaeus_1 ENSEEUT00000006031_erinaceuseuropaeus_1 100.00 520 0 0 1 520 1 520 0.0 1000 +ENSEEUT00000006031_erinaceuseuropaeus_1 ENSCAFT00000022963_canisfamiliaris_1 87.12 520 66 1 1 519 1 520 0.0 937 +ENSMGAT00000016429_meleagrisgallopavo_1 ENSMGAT00000016429_meleagrisgallopavo_1 100.00 522 0 0 1 522 1 522 0.0 1079 +ENSMGAT00000016429_meleagrisgallopavo_1 ENSGALT00000036672_gallusgallus_1 97.50 519 13 0 4 522 4 522 0.0 1051 +ENSTTRT00000009047_tursiopstruncatus_1 ENSTTRT00000009047_tursiopstruncatus_1 100.00 360 0 0 1 360 1 360 0.0 752 +ENSTTRT00000009047_tursiopstruncatus_1 ENSSSCT00000013404_susscrofa_1 92.22 360 28 0 1 360 169 528 0.0 706 +ENSOANT00000010366_ornithorhynchusanatinus_1 ENSOANT00000010366_ornithorhynchusanatinus_1 100.00 518 0 0 1 518 1 518 0.0 1076 +ENSOANT00000010366_ornithorhynchusanatinus_1 ENSCJAT00000055001_callithrixjacchus_1 81.67 502 92 0 13 514 23 524 0.0 888 +ENSDNOT00000032236_dasypusnovemcinctus_1 ENSDNOT00000032236_dasypusnovemcinctus_1 100.00 523 0 0 1 523 1 523 0.0 1085 +ENSDNOT00000032236_dasypusnovemcinctus_1 ENSOGAT00000030491_otolemurgarnettii_1 83.14 510 78 6 16 523 2 505 0.0 869 +ENSOANT00000010361_ornithorhynchusanatinus_1 ENSOANT00000010361_ornithorhynchusanatinus_1 100.00 566 0 0 1 566 1 566 0.0 1171 +ENSOANT00000010361_ornithorhynchusanatinus_1 ENSMODT00000026840_monodelphisdomestica_1 83.14 522 87 1 45 566 1 521 0.0 918 +ENSCSAT00000012035_chlorocebussabaeus_1 ENSPANT00000027701_papioanubis_1 99.24 526 4 0 1 526 455 980 0.0 1108 +ENSCSAT00000012035_chlorocebussabaeus_1 ENSCSAT00000012035_chlorocebussabaeus_1 100.00 528 0 0 1 528 1 528 0.0 1098 +ENSSSCT00000023183_susscrofa_1 ENSSSCT00000023183_susscrofa_1 100.00 505 0 0 1 505 1 505 0.0 1044 +ENSSSCT00000023183_susscrofa_1 ENSSSCT00000033745_susscrofa_1 99.80 505 1 0 1 505 1 505 0.0 1043 +ENSETET00000008126_echinopstelfairi_1 ENSETET00000008126_echinopstelfairi_1 100.00 527 0 0 1 527 1 527 0.0 836 +ENSETET00000008126_echinopstelfairi_1 ENSLAFT00000000504_loxodontaafricana_1 70.66 518 152 0 4 521 1 518 0.0 749 +ENSGMOT00000015214_gadusmorhua_1 ENSGMOT00000015214_gadusmorhua_1 100.00 531 0 0 1 531 1 531 0.0 1106 +ENSGMOT00000015214_gadusmorhua_1 ENSGACT00000012444_gasterosteusaculeatus_1 77.78 531 115 1 1 531 4 531 0.0 882 +ENSGGOT00000000206_gorillagorilla_1 ENSGGOT00000000206_gorillagorilla_1 100.00 521 0 0 1 521 1 521 0.0 1080 +ENSGGOT00000000206_gorillagorilla_1 ENSPTRT00000040521_pantroglodytes_1 99.81 521 1 0 1 521 1 521 0.0 1077 +ENSNLET00000003121_nomascusleucogenys_1 ENSNLET00000003121_nomascusleucogenys_1 100.00 521 0 0 1 521 1 521 0.0 1080 +ENSNLET00000003121_nomascusleucogenys_1 ENSGGOT00000000206_gorillagorilla_1 98.85 521 6 0 1 521 1 521 0.0 1069 +ENSXETT00000010521_xenopustropicalis_1 ENSXETT00000010517_xenopustropicalis_1 100.00 452 0 0 1 452 94 545 0.0 952 +ENSXETT00000010521_xenopustropicalis_1 ENSXETT00000010521_xenopustropicalis_1 100.00 452 0 0 1 452 1 452 0.0 945 +ENSCJAT00000020968_callithrixjacchus_1 ENSCJAT00000055001_callithrixjacchus_1 100.00 395 0 0 1 395 134 528 0.0 828 +ENSCJAT00000020968_callithrixjacchus_1 ENSCJAT00000020968_callithrixjacchus_1 100.00 395 0 0 1 395 1 395 0.0 826 +ENSTTRT00000009129_tursiopstruncatus_1 ENSTTRT00000009129_tursiopstruncatus_1 100.00 556 0 0 1 556 1 556 0.0 1057 +ENSTTRT00000009129_tursiopstruncatus_1 ENSCAFT00000022963_canisfamiliaris_1 86.76 521 69 0 36 556 1 521 0.0 929 +ENSCAFT00000022963_canisfamiliaris_1 ENSCAFT00000022963_canisfamiliaris_1 100.00 521 0 0 1 521 1 521 0.0 1080 +ENSCAFT00000022963_canisfamiliaris_1 ENSAMET00000018029_ailuropodamelanoleuca_1 97.04 506 15 0 16 521 17 522 0.0 1021 +ENSGGOT00000008973_gorillagorilla_1 ENSPPYT00000023637_pongoabelii_1 99.62 528 2 0 1 528 413 940 0.0 1115 +ENSGGOT00000008973_gorillagorilla_1 ENSGGOT00000008973_gorillagorilla_1 100.00 528 0 0 1 528 1 528 0.0 1099 +ENSOGAT00000031973_otolemurgarnettii_1 ENSOGAT00000031973_otolemurgarnettii_1 100.00 276 0 0 1 276 1 276 0.0 568 +ENSOGAT00000031973_otolemurgarnettii_1 ENSOGAT00000005620_otolemurgarnettii_1 76.41 301 44 4 1 274 191 491 6e-155 440 +ENSGACT00000024065_gasterosteusaculeatus_1 ENSGACT00000024065_gasterosteusaculeatus_1 100.00 470 0 0 1 470 1 470 0.0 973 +ENSGACT00000024065_gasterosteusaculeatus_1 ENSGACT00000024064_gasterosteusaculeatus_1 96.75 462 15 0 9 470 1 462 0.0 924 +ENSGACT00000024064_gasterosteusaculeatus_1 ENSGACT00000024064_gasterosteusaculeatus_1 100.00 472 0 0 1 472 1 472 0.0 979 +ENSGACT00000024064_gasterosteusaculeatus_1 ENSGACT00000024065_gasterosteusaculeatus_1 96.75 462 15 0 1 462 9 470 0.0 924 +ENSAMET00000018029_ailuropodamelanoleuca_1 ENSAMET00000018029_ailuropodamelanoleuca_1 100.00 522 0 0 1 522 1 522 0.0 1082 +ENSAMET00000018029_ailuropodamelanoleuca_1 ENSCAFT00000022963_canisfamiliaris_1 97.04 506 15 0 17 522 16 521 0.0 1021 +ENSECAT00000001417_equuscaballus_1 ENSECAT00000001417_equuscaballus_1 100.00 521 0 0 1 521 1 521 0.0 1080 +ENSECAT00000001417_equuscaballus_1 ENSCAFT00000022963_canisfamiliaris_1 94.82 521 27 0 1 521 1 521 0.0 1036 +ENSTSYT00000009875_tarsiussyrichta_1 ENSTSYT00000009875_tarsiussyrichta_1 100.00 565 0 0 1 565 1 565 0.0 955 +ENSTSYT00000009875_tarsiussyrichta_1 ENSGGOT00000000206_gorillagorilla_1 84.16 505 76 1 65 565 17 521 0.0 880 +ENSSSCT00000033745_susscrofa_1 ENSSSCT00000033745_susscrofa_1 100.00 505 0 0 1 505 1 505 0.0 1043 +ENSSSCT00000033745_susscrofa_1 ENSSSCT00000023183_susscrofa_1 99.80 505 1 0 1 505 1 505 0.0 1043 +ENSOART00000003571_ovisaries_1 ENSOART00000003571_ovisaries_1 100.00 452 0 0 1 452 1 452 0.0 939 +ENSOART00000003571_ovisaries_1 ENSBTAT00000001698_bostaurus_1 93.63 455 24 1 3 452 67 521 0.0 881 +ENSMGAT00000016431_meleagrisgallopavo_1 ENSMGAT00000016431_meleagrisgallopavo_1 100.00 526 0 0 1 526 1 526 0.0 1093 +ENSMGAT00000016431_meleagrisgallopavo_1 ENSAPLT00000013855_anasplatyrhynchos_1 87.10 527 65 2 1 526 7 531 0.0 951 +ENSCHOT00000008295_choloepushoffmanni_1 ENSCHOT00000008295_choloepushoffmanni_1 100.00 527 0 0 1 527 1 527 0.0 902 +ENSCHOT00000008295_choloepushoffmanni_1 ENSECAT00000024641_equuscaballus_1 78.48 525 112 1 2 525 2 526 0.0 840 +ENSOCUT00000001433_oryctolaguscuniculus_1 ENSOCUT00000001433_oryctolaguscuniculus_1 100.00 947 0 0 1 947 1 947 0.0 1934 +ENSOCUT00000001433_oryctolaguscuniculus_1 ENSPPYT00000023637_pongoabelii_1 65.35 935 293 6 20 945 26 938 0.0 1154 +ENSPPYT00000023640_pongoabelii_1 ENSPPYT00000023640_pongoabelii_1 100.00 530 0 0 1 530 1 530 0.0 1097 +ENSPPYT00000023640_pongoabelii_1 ENSPPYT00000023641_pongoabelii_1 92.35 523 0 1 48 530 1 523 0.0 986 +ENSPPYT00000023641_pongoabelii_1 ENSPPYT00000023641_pongoabelii_1 100.00 523 0 0 1 523 1 523 0.0 1086 +ENSPPYT00000023641_pongoabelii_1 ENSPPYT00000023640_pongoabelii_1 92.35 523 0 1 1 523 48 530 0.0 986 +ENSOGAT00000030491_otolemurgarnettii_1 ENSOGAT00000030491_otolemurgarnettii_1 100.00 505 0 0 1 505 1 505 0.0 1049 +ENSOGAT00000030491_otolemurgarnettii_1 ENSCAFT00000022939_canisfamiliaris_1 92.67 505 37 0 1 505 24 528 0.0 992 +ENSCHOT00000004109_choloepushoffmanni_1 ENSCHOT00000004109_choloepushoffmanni_1 100.00 452 0 0 1 452 1 452 0.0 629 +ENSCHOT00000004109_choloepushoffmanni_1 ENSCAFT00000022963_canisfamiliaris_1 68.94 454 139 2 1 452 17 470 0.0 607 +ENSOCUT00000001438_oryctolaguscuniculus_1 ENSOCUT00000001438_oryctolaguscuniculus_1 100.00 521 0 0 1 521 1 521 0.0 1076 +ENSOCUT00000001438_oryctolaguscuniculus_1 ENSCAFT00000022963_canisfamiliaris_1 93.67 521 33 0 1 521 1 521 0.0 1021 +ENSTGUT00000006498_taeniopygiaguttata_1 ENSTGUT00000006498_taeniopygiaguttata_1 100.00 522 0 0 1 522 1 522 0.0 1080 +ENSTGUT00000006498_taeniopygiaguttata_1 ENSFALT00000001560_ficedulaalbicollis_1 96.47 510 18 0 13 522 14 523 0.0 1024 +ENSLACT00000026689_latimeriachalumnae_1 ENSLACT00000026689_latimeriachalumnae_1 100.00 523 0 0 1 523 1 523 0.0 1084 +ENSLACT00000026689_latimeriachalumnae_1 ENSLACT00000014695_latimeriachalumnae_1 87.08 511 59 3 17 523 12 519 0.0 923 +ENSPANT00000027701_papioanubis_1 ENSPANT00000027701_papioanubis_1 100.00 983 0 0 1 983 1 983 0.0 2001 +ENSPANT00000027701_papioanubis_1 ENSPPYT00000023637_pongoabelii_1 92.37 904 69 0 77 980 35 938 0.0 1710 +ENSPPYT00000023637_pongoabelii_1 ENSPPYT00000023637_pongoabelii_1 100.00 940 0 0 1 940 1 940 0.0 1915 +ENSPPYT00000023637_pongoabelii_1 ENSPANT00000027701_papioanubis_1 88.37 980 72 1 1 938 1 980 0.0 1690 +ENSMUST00000040820_musmusculus_1 ENSMUST00000040820_musmusculus_1 100.00 521 0 0 1 521 1 521 0.0 1079 +ENSMUST00000040820_musmusculus_1 ENSRNOT00000044009_rattusnorvegicus_1 96.93 521 16 0 1 521 1 521 0.0 1048 +ENSLAFT00000027936_loxodontaafricana_1 ENSLAFT00000027936_loxodontaafricana_1 100.00 431 0 0 1 431 1 431 0.0 900 +ENSLAFT00000027936_loxodontaafricana_1 ENSLAFT00000015029_loxodontaafricana_1 100.00 425 0 0 4 428 93 517 0.0 889 +ENSPSIT00000016442_pelodiscussinensis_1 ENSPSIT00000016442_pelodiscussinensis_1 100.00 510 0 0 1 510 1 510 0.0 1062 +ENSPSIT00000016442_pelodiscussinensis_1 ENSAPLT00000013117_anasplatyrhynchos_1 87.25 510 62 1 1 510 15 521 0.0 944 +ENSOART00000003319_ovisaries_1 ENSOART00000003319_ovisaries_1 100.00 528 0 0 1 528 1 528 0.0 1100 +ENSOART00000003319_ovisaries_1 ENSBTAT00000021570_bostaurus_1 98.11 528 10 0 1 528 1 528 0.0 1085 +ENSMMUT00000046681_macacamulatta_1 ENSMMUT00000046681_macacamulatta_1 100.00 46 0 0 1 46 1 46 2e-29 94.4 +ENSMMUT00000046681_macacamulatta_1 ENSPANT00000027701_papioanubis_1 100.00 46 0 0 1 46 511 556 9e-29 101 +ENSMMUT00000046680_macacamulatta_1 ENSMMUT00000046680_macacamulatta_1 100.00 65 0 0 1 65 1 65 2e-45 136 +ENSMMUT00000046680_macacamulatta_1 ENSCSAT00000012035_chlorocebussabaeus_1 100.00 65 0 0 1 65 103 167 2e-44 144 +ENSBTAT00000021570_bostaurus_1 ENSBTAT00000021570_bostaurus_1 100.00 528 0 0 1 528 1 528 0.0 1098 +ENSBTAT00000021570_bostaurus_1 ENSOART00000003319_ovisaries_1 98.11 528 10 0 1 528 1 528 0.0 1085 +ENST00000378069_homosapiens_1 ENST00000378069_homosapiens_1 100.00 521 0 0 1 521 1 521 0.0 1080 +ENST00000378069_homosapiens_1 ENSGGOT00000000206_gorillagorilla_1 99.81 521 1 0 1 521 1 521 0.0 1077 +ENSPANT00000027606_papioanubis_1 ENSPANT00000027606_papioanubis_1 100.00 531 0 0 1 531 1 531 0.0 1100 +ENSPANT00000027606_papioanubis_1 ENSPANT00000027631_papioanubis_1 98.64 514 4 1 18 531 3 513 0.0 1041 +ENSLAFT00000000504_loxodontaafricana_1 ENSLAFT00000000504_loxodontaafricana_1 100.00 518 0 0 1 518 1 518 0.0 1078 +ENSLAFT00000000504_loxodontaafricana_1 ENSECAT00000024641_equuscaballus_1 90.93 518 47 0 1 518 5 522 0.0 1000 +ENSPCAT00000006605_procaviacapensis_1 ENSPCAT00000006605_procaviacapensis_1 100.00 527 0 0 1 527 1 527 0.0 901 +ENSPCAT00000006605_procaviacapensis_1 ENSLAFT00000000504_loxodontaafricana_1 77.22 518 117 1 5 521 1 518 0.0 801 +ENSLOCT00000002323_lepisosteusoculatus_1 ENSLOCT00000002323_lepisosteusoculatus_1 100.00 526 0 0 1 526 1 526 0.0 1090 +ENSLOCT00000002323_lepisosteusoculatus_1 ENSDART00000028225_daniorerio_1 75.29 522 122 4 3 522 3 519 0.0 816 +ENSMUST00000173143_musmusculus_1 ENSMUST00000173143_musmusculus_1 100.00 36 0 0 1 36 1 36 6e-21 72.0 +ENSMUST00000173143_musmusculus_1 ENSMUST00000163344_musmusculus_1 100.00 15 0 0 1 15 1 15 4e-06 33.5 +ENSRNOT00000044009_rattusnorvegicus_1 ENSRNOT00000044009_rattusnorvegicus_1 100.00 521 0 0 1 521 1 521 0.0 1078 +ENSRNOT00000044009_rattusnorvegicus_1 ENSMUST00000040820_musmusculus_1 96.93 521 16 0 1 521 1 521 0.0 1048 +ENSMODT00000026841_monodelphisdomestica_1 ENSMODT00000026841_monodelphisdomestica_1 100.00 554 0 0 1 554 1 554 0.0 1148 +ENSMODT00000026841_monodelphisdomestica_1 ENSCAFT00000022939_canisfamiliaris_1 76.78 534 109 1 17 550 4 522 0.0 869 +ENSLACT00000015911_latimeriachalumnae_1 ENSLACT00000015911_latimeriachalumnae_1 100.00 508 0 0 1 508 1 508 0.0 1059 +ENSLACT00000015911_latimeriachalumnae_1 ENSLACT00000026572_latimeriachalumnae_1 92.38 499 1 2 10 508 1 462 0.0 941 +ENSSSCT00000035258_susscrofa_1 ENSSSCT00000035258_susscrofa_1 100.00 143 0 0 1 143 1 143 2e-106 297 +ENSSSCT00000035258_susscrofa_1 ENSSSCT00000013404_susscrofa_1 87.20 164 0 1 1 143 345 508 3e-97 287 +ENSTRUT00000011582_takifugurubripes_1 ENSTRUT00000011582_takifugurubripes_1 100.00 473 0 0 1 473 1 473 0.0 974 +ENSTRUT00000011582_takifugurubripes_1 ENSTRUT00000011581_takifugurubripes_1 99.79 469 1 0 5 473 4 472 0.0 964 +ENSPSIT00000017443_pelodiscussinensis_1 ENSPSIT00000017443_pelodiscussinensis_1 100.00 522 0 0 1 522 1 522 0.0 1080 +ENSPSIT00000017443_pelodiscussinensis_1 ENSPSIT00000017454_pelodiscussinensis_1 100.00 507 0 0 16 522 25 531 0.0 1053 +ENSTRUT00000011580_takifugurubripes_1 ENSTRUT00000011580_takifugurubripes_1 100.00 471 0 0 1 471 1 471 0.0 971 +ENSTRUT00000011580_takifugurubripes_1 ENSTRUT00000011581_takifugurubripes_1 99.35 464 3 0 8 471 9 472 0.0 951 +ENSTRUT00000011581_takifugurubripes_1 ENSTRUT00000011581_takifugurubripes_1 100.00 472 0 0 1 472 1 472 0.0 971 +ENSTRUT00000011581_takifugurubripes_1 ENSTRUT00000011582_takifugurubripes_1 99.79 469 1 0 4 472 5 473 0.0 964
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output.tabular Mon Dec 12 07:13:57 2016 -0500 @@ -0,0 +1,161 @@ +ENSFCAT00000013089_feliscatus_1 ENSCAFT00000022939_canisfamiliaris_1 100 +ENSCAFT00000022939_canisfamiliaris_1 ENSFCAT00000013089_feliscatus_1 100 +ENSAMXT00000002585_astyanaxmexicanus_1 ENSDART00000028225_daniorerio_1 100 +ENSPCAT00000008534_procaviacapensis_1 ENST00000378069_homosapiens_1 100 +ENSLOCT00000017020_lepisosteusoculatus_1 ENSLACT00000026689_latimeriachalumnae_1 100 +ENSCPOT00000000986_caviaporcellus_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSTGUT00000016508_taeniopygiaguttata_1 ENSTGUT00000006603_taeniopygiaguttata_1 100 +ENSPFOT00000010657_poeciliaformosa_1 ENSXMAT00000001796_xiphophorusmaculatus_1 100 +ENSDNOT00000016434_dasypusnovemcinctus_1 ENSDNOT00000036768_dasypusnovemcinctus_1 100 +ENSPMAT00000010398_petromyzonmarinus_1 ENSLACT00000015911_latimeriachalumnae_1 64 +ENSAMET00000018099_ailuropodamelanoleuca_1 ENSCAFT00000022939_canisfamiliaris_1 100 +ENSEEUT00000005606_erinaceuseuropaeus_1 ENSMPUT00000012759_mustelaputoriusfuro_1 100 +ENSSHAT00000006757_sarcophilusharrisii_1 ENSMODT00000026841_monodelphisdomestica_1 100 +ENSPSIT00000017454_pelodiscussinensis_1 ENSPSIT00000017443_pelodiscussinensis_1 100 +ENSPFOT00000022544_poeciliaformosa_1 ENSXMAT00000001796_xiphophorusmaculatus_1 100 +ENSMICT00000002052_microcebusmurinus_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSMICT00000002052_microcebusmurinus_1 ENSCAFT00000022963_canisfamiliaris_1 46 +ENSRNOT00000066674_rattusnorvegicus_1 ENSMUST00000026013_musmusculus_1 100 +ENSFCAT00000013090_feliscatus_1 ENSAMET00000018029_ailuropodamelanoleuca_1 100 +ENSONIT00000020514_oreochromisniloticus_1 ENSPFOT00000009022_poeciliaformosa_1 100 +ENSLACT00000026572_latimeriachalumnae_1 ENSLACT00000015911_latimeriachalumnae_1 100 +ENSPMAT00000003449_petromyzonmarinus_1 ENSGGOT00000000206_gorillagorilla_1 100 +ENSSART00000014230_sorexaraneus_1 ENSSTOT00000004965_ictidomystridecemlineatus_1 100 +ENSSART00000014230_sorexaraneus_1 ENSSTOT00000004965_ictidomystridecemlineatus_1 44 +ENSBTAT00000001698_bostaurus_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSTBET00000006983_tupaiabelangeri_1 ENSAMET00000018099_ailuropodamelanoleuca_1 100 +ENSLACT00000014274_latimeriachalumnae_1 ENSLACT00000026689_latimeriachalumnae_1 100 +ENSPFOT00000009022_poeciliaformosa_1 ENSTRUT00000035430_takifugurubripes_1 100 +ENSSHAT00000005478_sarcophilusharrisii_1 ENSMODT00000026840_monodelphisdomestica_1 100 +ENSTBET00000000639_tupaiabelangeri_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSTGUT00000006603_taeniopygiaguttata_1 ENSFALT00000001591_ficedulaalbicollis_1 100 +ENSSART00000014241_sorexaraneus_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSPVAT00000011223_pteropusvampyrus_1 ENSCAFT00000022939_canisfamiliaris_1 100 +ENSPVAT00000011226_pteropusvampyrus_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSAPLT00000013117_anasplatyrhynchos_1 ENSMGAT00000016429_meleagrisgallopavo_1 100 +ENSFALT00000001560_ficedulaalbicollis_1 ENSTGUT00000006498_taeniopygiaguttata_1 100 +ENST00000338702_homosapiens_1 ENSPPYT00000023637_pongoabelii_1 100 +ENSXMAT00000001796_xiphophorusmaculatus_1 ENSONIT00000016435_oreochromisniloticus_1 100 +ENSSSCT00000013404_susscrofa_1 ENSPPYT00000023637_pongoabelii_1 100 +ENSGALT00000036672_gallusgallus_1 ENSMGAT00000016429_meleagrisgallopavo_1 100 +ENSOPRT00000017156_ochotonaprinceps_1 ENSOCUT00000001438_oryctolaguscuniculus_1 100 +ENSOPRT00000017156_ochotonaprinceps_1 ENSOCUT00000001438_oryctolaguscuniculus_1 17 +ENSSTOT00000004988_ictidomystridecemlineatus_1 ENSPANT00000027606_papioanubis_1 100 +ENSECAT00000024641_equuscaballus_1 ENSCAFT00000022939_canisfamiliaris_1 100 +ENSAPLT00000013855_anasplatyrhynchos_1 ENSMGAT00000016431_meleagrisgallopavo_1 100 +ENSDART00000132084_daniorerio_1 ENSDART00000160057_daniorerio_1 100 +ENSNLET00000003021_nomascusleucogenys_1 ENSPPYT00000023637_pongoabelii_1 100 +ENSPTRT00000040521_pantroglodytes_1 ENSGGOT00000000206_gorillagorilla_1 100 +ENSPTRT00000040520_pantroglodytes_1 ENSPPYT00000023637_pongoabelii_1 100 +ENSMEUT00000003745_macropuseugenii_1 ENSMODT00000026841_monodelphisdomestica_1 100 +ENSMICT00000002042_microcebusmurinus_1 ENSDNOT00000039756_dasypusnovemcinctus_1 100 +ENSXETT00000010517_xenopustropicalis_1 ENSXETT00000010521_xenopustropicalis_1 100 +ENSMODT00000026840_monodelphisdomestica_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSMLUT00000001428_myotislucifugus_1 ENSAMET00000018099_ailuropodamelanoleuca_1 100 +ENST00000542639_homosapiens_1 ENSPPYT00000023637_pongoabelii_1 100 +ENST00000542639_homosapiens_1 ENST00000338702_homosapiens_1 100 +ENSCJAT00000055001_callithrixjacchus_1 ENSPPYT00000023637_pongoabelii_1 100 +ENSTSYT00000009837_tarsiussyrichta_1 ENSSTOT00000004965_ictidomystridecemlineatus_1 100 +ENSTRUT00000035430_takifugurubripes_1 ENSTNIT00000014720_tetraodonnigroviridis_1 100 +ENSMEUT00000006183_macropuseugenii_1 ENSMODT00000026840_monodelphisdomestica_1 100 +ENSFALT00000001591_ficedulaalbicollis_1 ENSTGUT00000006603_taeniopygiaguttata_1 100 +ENSMUST00000168613_musmusculus_1 ENSMUST00000040820_musmusculus_1 100 +ENSSSCT00000032764_susscrofa_1 ENSSSCT00000013404_susscrofa_1 100 +ENSGALT00000026158_gallusgallus_1 ENSMGAT00000016431_meleagrisgallopavo_1 100 +ENSDART00000160057_daniorerio_1 ENSDART00000132084_daniorerio_1 100 +ENSMPUT00000012759_mustelaputoriusfuro_1 ENSCAFT00000022939_canisfamiliaris_1 100 +ENSDORT00000003971_dipodomysordii_1 ENSSTOT00000004965_ictidomystridecemlineatus_1 100 +ENSVPAT00000000658_vicugnapacos_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSLACT00000009516_latimeriachalumnae_1 ENSLOCT00000017020_lepisosteusoculatus_1 100 +ENSLACT00000014694_latimeriachalumnae_1 ENSLACT00000014695_latimeriachalumnae_1 100 +ENSLACT00000014695_latimeriachalumnae_1 ENSLACT00000026689_latimeriachalumnae_1 100 +ENSXMAT00000006977_xiphophorusmaculatus_1 ENSPFOT00000009022_poeciliaformosa_1 100 +ENSVPAT00000000657_vicugnapacos_1 ENSSSCT00000013404_susscrofa_1 100 +ENSDART00000028225_daniorerio_1 ENSAMXT00000002585_astyanaxmexicanus_1 100 +ENSXETT00000010504_xenopustropicalis_1 ENSAPLT00000013117_anasplatyrhynchos_1 100 +ENSPANT00000027631_papioanubis_1 ENSMMUT00000027387_macacamulatta_1 100 +ENSMUST00000026013_musmusculus_1 ENSRNOT00000066674_rattusnorvegicus_1 100 +ENSACAT00000017988_anoliscarolinensis_1 ENSAPLT00000013117_anasplatyrhynchos_1 100 +ENSDNOT00000036768_dasypusnovemcinctus_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSOGAT00000005620_otolemurgarnettii_1 ENSECAT00000001417_equuscaballus_1 100 +ENSDNOT00000039756_dasypusnovemcinctus_1 ENSPANT00000027701_papioanubis_1 100 +ENSGACT00000012444_gasterosteusaculeatus_1 ENSPFOT00000009022_poeciliaformosa_1 100 +ENSONIT00000016435_oreochromisniloticus_1 ENSXMAT00000001796_xiphophorusmaculatus_1 100 +ENSETET00000017262_echinopstelfairi_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSDORT00000011171_dipodomysordii_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSTNIT00000014720_tetraodonnigroviridis_1 ENSTRUT00000035430_takifugurubripes_1 100 +ENSCJAT00000058575_callithrixjacchus_1 ENSCJAT00000021080_callithrixjacchus_1 100 +ENSCSAT00000012027_chlorocebussabaeus_1 ENSGGOT00000000206_gorillagorilla_1 100 +ENSCPOT00000001038_caviaporcellus_1 ENSSTOT00000004965_ictidomystridecemlineatus_1 100 +ENSCPOT00000001039_caviaporcellus_1 ENSCPOT00000001038_caviaporcellus_1 100 +ENSMPUT00000012840_mustelaputoriusfuro_1 ENSAMET00000018029_ailuropodamelanoleuca_1 100 +ENSSTOT00000004965_ictidomystridecemlineatus_1 ENSECAT00000024641_equuscaballus_1 100 +ENSMLUT00000001440_myotislucifugus_1 ENSPANT00000027606_papioanubis_1 100 +ENSORLT00000017214_oryziaslatipes_1 ENSPFOT00000009022_poeciliaformosa_1 100 +ENSMUST00000163344_musmusculus_1 ENSMUST00000168613_musmusculus_1 63 +ENSACAT00000017993_anoliscarolinensis_1 ENSPSIT00000017443_pelodiscussinensis_1 100 +ENSCJAT00000021080_callithrixjacchus_1 ENSCJAT00000058575_callithrixjacchus_1 100 +ENSOPRT00000000678_ochotonaprinceps_1 ENSOGAT00000030491_otolemurgarnettii_1 100 +ENSOPRT00000000678_ochotonaprinceps_1 ENSOGAT00000030491_otolemurgarnettii_1 19 +ENSMMUT00000027384_macacamulatta_1 ENSPANT00000027701_papioanubis_1 100 +ENSMMUT00000027387_macacamulatta_1 ENSPANT00000027631_papioanubis_1 100 +ENSLOCT00000019886_lepisosteusoculatus_1 ENSDART00000160057_daniorerio_1 100 +ENSLAFT00000015029_loxodontaafricana_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSEEUT00000006031_erinaceuseuropaeus_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSMGAT00000016429_meleagrisgallopavo_1 ENSGALT00000036672_gallusgallus_1 100 +ENSTTRT00000009047_tursiopstruncatus_1 ENSSSCT00000013404_susscrofa_1 100 +ENSOANT00000010366_ornithorhynchusanatinus_1 ENSCJAT00000055001_callithrixjacchus_1 100 +ENSDNOT00000032236_dasypusnovemcinctus_1 ENSOGAT00000030491_otolemurgarnettii_1 100 +ENSOANT00000010361_ornithorhynchusanatinus_1 ENSMODT00000026840_monodelphisdomestica_1 100 +ENSCSAT00000012035_chlorocebussabaeus_1 ENSPANT00000027701_papioanubis_1 100 +ENSSSCT00000023183_susscrofa_1 ENSSSCT00000033745_susscrofa_1 100 +ENSETET00000008126_echinopstelfairi_1 ENSLAFT00000000504_loxodontaafricana_1 100 +ENSGMOT00000015214_gadusmorhua_1 ENSGACT00000012444_gasterosteusaculeatus_1 100 +ENSGGOT00000000206_gorillagorilla_1 ENSPTRT00000040521_pantroglodytes_1 100 +ENSNLET00000003121_nomascusleucogenys_1 ENSGGOT00000000206_gorillagorilla_1 100 +ENSXETT00000010521_xenopustropicalis_1 ENSXETT00000010517_xenopustropicalis_1 100 +ENSCJAT00000020968_callithrixjacchus_1 ENSCJAT00000055001_callithrixjacchus_1 100 +ENSTTRT00000009129_tursiopstruncatus_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSCAFT00000022963_canisfamiliaris_1 ENSAMET00000018029_ailuropodamelanoleuca_1 100 +ENSGGOT00000008973_gorillagorilla_1 ENSPPYT00000023637_pongoabelii_1 100 +ENSOGAT00000031973_otolemurgarnettii_1 ENSOGAT00000005620_otolemurgarnettii_1 100 +ENSGACT00000024065_gasterosteusaculeatus_1 ENSGACT00000024064_gasterosteusaculeatus_1 100 +ENSGACT00000024064_gasterosteusaculeatus_1 ENSGACT00000024065_gasterosteusaculeatus_1 100 +ENSAMET00000018029_ailuropodamelanoleuca_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSECAT00000001417_equuscaballus_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSTSYT00000009875_tarsiussyrichta_1 ENSGGOT00000000206_gorillagorilla_1 100 +ENSSSCT00000033745_susscrofa_1 ENSSSCT00000023183_susscrofa_1 100 +ENSOART00000003571_ovisaries_1 ENSBTAT00000001698_bostaurus_1 100 +ENSMGAT00000016431_meleagrisgallopavo_1 ENSAPLT00000013855_anasplatyrhynchos_1 100 +ENSCHOT00000008295_choloepushoffmanni_1 ENSECAT00000024641_equuscaballus_1 100 +ENSOCUT00000001433_oryctolaguscuniculus_1 ENSPPYT00000023637_pongoabelii_1 100 +ENSPPYT00000023640_pongoabelii_1 ENSPPYT00000023641_pongoabelii_1 100 +ENSPPYT00000023641_pongoabelii_1 ENSPPYT00000023640_pongoabelii_1 100 +ENSOGAT00000030491_otolemurgarnettii_1 ENSCAFT00000022939_canisfamiliaris_1 100 +ENSCHOT00000004109_choloepushoffmanni_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSOCUT00000001438_oryctolaguscuniculus_1 ENSCAFT00000022963_canisfamiliaris_1 100 +ENSTGUT00000006498_taeniopygiaguttata_1 ENSFALT00000001560_ficedulaalbicollis_1 100 +ENSLACT00000026689_latimeriachalumnae_1 ENSLACT00000014695_latimeriachalumnae_1 100 +ENSPANT00000027701_papioanubis_1 ENSPPYT00000023637_pongoabelii_1 100 +ENSPPYT00000023637_pongoabelii_1 ENSPANT00000027701_papioanubis_1 100 +ENSMUST00000040820_musmusculus_1 ENSRNOT00000044009_rattusnorvegicus_1 100 +ENSLAFT00000027936_loxodontaafricana_1 ENSLAFT00000015029_loxodontaafricana_1 100 +ENSPSIT00000016442_pelodiscussinensis_1 ENSAPLT00000013117_anasplatyrhynchos_1 100 +ENSOART00000003319_ovisaries_1 ENSBTAT00000021570_bostaurus_1 100 +ENSMMUT00000046681_macacamulatta_1 ENSPANT00000027701_papioanubis_1 28 +ENSMMUT00000046680_macacamulatta_1 ENSCSAT00000012035_chlorocebussabaeus_1 44 +ENSBTAT00000021570_bostaurus_1 ENSOART00000003319_ovisaries_1 100 +ENST00000378069_homosapiens_1 ENSGGOT00000000206_gorillagorilla_1 100 +ENSPANT00000027606_papioanubis_1 ENSPANT00000027631_papioanubis_1 100 +ENSLAFT00000000504_loxodontaafricana_1 ENSECAT00000024641_equuscaballus_1 100 +ENSPCAT00000006605_procaviacapensis_1 ENSLAFT00000000504_loxodontaafricana_1 100 +ENSLOCT00000002323_lepisosteusoculatus_1 ENSDART00000028225_daniorerio_1 100 +ENSMUST00000173143_musmusculus_1 ENSMUST00000163344_musmusculus_1 5 +ENSRNOT00000044009_rattusnorvegicus_1 ENSMUST00000040820_musmusculus_1 100 +ENSMODT00000026841_monodelphisdomestica_1 ENSCAFT00000022939_canisfamiliaris_1 100 +ENSLACT00000015911_latimeriachalumnae_1 ENSLACT00000026572_latimeriachalumnae_1 100 +ENSSSCT00000035258_susscrofa_1 ENSSSCT00000013404_susscrofa_1 97 +ENSTRUT00000011582_takifugurubripes_1 ENSTRUT00000011581_takifugurubripes_1 100 +ENSPSIT00000017443_pelodiscussinensis_1 ENSPSIT00000017454_pelodiscussinensis_1 100 +ENSTRUT00000011580_takifugurubripes_1 ENSTRUT00000011581_takifugurubripes_1 100 +ENSTRUT00000011581_takifugurubripes_1 ENSTRUT00000011582_takifugurubripes_1 100