Mercurial > repos > earlhaminst > ensembl_get_genetree

diff get_genetree.xml @ 2:950d9d11b6fb draft

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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/Ensembl-REST commit 099d38157cec200f0a343579ca9babcd8acb266f
author earlhaminst
date Wed, 21 Dec 2016 15:16:35 -0500
parents 98aba0efe77a
children 181e12d6ac96
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line diff
--- a/get_genetree.xml	Mon Dec 12 07:47:26 2016 -0500
+++ b/get_genetree.xml	Wed Dec 21 15:16:35 2016 -0500
@@ -1,4 +1,4 @@
-<tool id="get_genetree" name="Get gene tree by Ensembl ID" version="0.1.1">
+<tool id="get_genetree" name="Get gene tree by Ensembl ID" version="0.1.2">
     <description>using REST API</description>
     <macros>
         <xml name="sequence_conditional">
@@ -21,7 +21,8 @@
         </xml>
     </macros>
     <requirements>
-        <requirement type="package" version="2.7">requests</requirement>
+        <requirement type="package" version="2.12.4">requests</requirement>
+        <requirement type="package" version="1.10.0">six</requirement>
     </requirements>
     <command>
 <![CDATA[
@@ -108,7 +109,7 @@
             <param name="sequence_selector" value="protein" />
             <param name="aligned" value="0" />
             <param name="cigar" value="0" />
-            <output name="output" file="genetree.json" ftype="json" />
+            <output name="output" file="genetree.json" ftype="json" compare="sim_size" />
         </test>
         <test>
             <param name="input_type" value="gene_tree_id" />
@@ -117,7 +118,7 @@
             <param name="sequence_selector" value="protein" />
             <param name="aligned" value="0" />
             <param name="cigar" value="0" />
-            <output name="output" file="genetree.json" ftype="json" />
+            <output name="output" file="genetree.json" ftype="json" compare="sim_size" />
         </test>
         <test>
             <param name="input_type" value="gene_tree_id" />