annotate test-data/Mus_musculus.GRCm38.cds.longest.fa @ 2:6cf9f7f6509c draft default tip

planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
author earlhaminst
date Wed, 15 Mar 2017 20:23:13 -0400
parents 4dba69135845
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
1 >ENSMUST00000196221.1 cds chromosome:GRCm38:14:54113468:54113476:1 gene:ENSMUSG00000096749.2 gene_biotype:TR_D_gene transcript_biotype:TR_D_gene gene_symbol:Trdd1 description:T cell receptor delta diversity 1 [Source:MGI Symbol;Acc:MGI:4439547]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
2 ATGGCATAT
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
3 >ENSMUST00000177564.1 cds chromosome:GRCm38:14:54122226:54122241:1 gene:ENSMUSG00000096176.1 gene_biotype:TR_D_gene transcript_biotype:TR_D_gene gene_symbol:Trdd2 description:T cell receptor delta diversity 2 [Source:MGI Symbol;Acc:MGI:4439546]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
4 ATCGGAGGGATACGAG
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
5 >ENSMUST00000178537.1 cds chromosome:GRCm38:6:41533201:41533212:1 gene:ENSMUSG00000095668.1 gene_biotype:TR_D_gene transcript_biotype:TR_D_gene gene_symbol:Trbd1 description:T cell receptor beta, D region 1 [Source:MGI Symbol;Acc:MGI:4439571]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
6 GGGACAGGGGGC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
7 >ENSMUST00000178862.1 cds chromosome:GRCm38:6:41542163:41542176:1 gene:ENSMUSG00000094569.1 gene_biotype:TR_D_gene transcript_biotype:TR_D_gene gene_symbol:Trbd2 description:T cell receptor beta, D region 2 [Source:MGI Symbol;Acc:MGI:4439727]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
8 GGGACTGGGGGGGC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
9 >ENSMUST00000179520.1 cds chromosome:GRCm38:12:113430528:113430538:-1 gene:ENSMUSG00000094028.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd4-1 description:immunoglobulin heavy diversity 4-1 [Source:MGI Symbol;Acc:MGI:4439801]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
10 CTAACTGGGAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
11 >ENSMUST00000179883.1 cds chromosome:GRCm38:12:113448214:113448229:-1 gene:ENSMUSG00000094552.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd3-2 description:immunoglobulin heavy diversity 3-2 [Source:MGI Symbol;Acc:MGI:4439707]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
12 AGACAGCTCAGGCTAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
13 >ENSMUST00000195858.1 cds chromosome:GRCm38:12:113449588:113449597:-1 gene:ENSMUSG00000096420.2 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd5-6 description:immunoglobulin heavy diversity 5-6 [Source:MGI Symbol;Acc:MGI:4937234]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
14 GAATACCTAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
15 >ENSMUST00000180001.1 cds chromosome:GRCm38:12:113450851:113450867:-1 gene:ENSMUSG00000095656.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd2-8 description:immunoglobulin heavy diversity 2-8 [Source:MGI Symbol;Acc:MGI:4439706]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
16 TCTACTATGGTAACTAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
17 >ENSMUST00000178815.1 cds chromosome:GRCm38:12:113454942:113454951:-1 gene:ENSMUSG00000094957.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd5-5 description:immunoglobulin heavy diversity 5-5 [Source:MGI Symbol;Acc:MGI:4937334]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
18 GACTACCTAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
19 >ENSMUST00000177965.1 cds chromosome:GRCm38:12:113456720:113456736:-1 gene:ENSMUSG00000094057.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd2-7 description:immunoglobulin heavy diversity 2-7 [Source:MGI Symbol;Acc:MGI:4439866]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
20 TCTACTATGGTTACGAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
21 >ENSMUST00000178909.1 cds chromosome:GRCm38:12:113459864:113459892:-1 gene:ENSMUSG00000094268.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd5-8 description:immunoglobulin heavy diversity 5-8 [Source:MGI Symbol;Acc:MGI:4937171]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
22 AGACAGCTAGCCTCTGCAGTGCCACAACC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
23 >ENSMUST00000177646.1 cds chromosome:GRCm38:12:113460101:113460110:-1 gene:ENSMUSG00000096884.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd5-4 description:immunoglobulin heavy diversity 5-4 [Source:MGI Symbol;Acc:MGI:4937058]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
24 GAATACCTAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
25 >ENSMUST00000178230.1 cds chromosome:GRCm38:12:113461369:113461385:-1 gene:ENSMUSG00000096250.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd2-6 description:immunoglobulin heavy diversity 2-6 [Source:MGI Symbol;Acc:MGI:4439865]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
26 CCTACTATAGTAACTAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
27 >ENSMUST00000178483.1 cds chromosome:GRCm38:12:113464524:113464552:-1 gene:ENSMUSG00000095592.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd5-7 description:immunoglobulin heavy diversity 5-7 [Source:MGI Symbol;Acc:MGI:4936973]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
28 AGGCAGCTAGCCTCTGCAGTGCCACAACC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
29 >ENSMUST00000179262.1 cds chromosome:GRCm38:12:113464761:113464770:-1 gene:ENSMUSG00000093876.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd5-3 description:immunoglobulin heavy diversity 5-3 [Source:MGI Symbol;Acc:MGI:4937297]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
30 GAATACCTAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
31 >ENSMUST00000178549.1 cds chromosome:GRCm38:12:113466027:113466043:-1 gene:ENSMUSG00000095897.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd2-5 description:immunoglobulin heavy diversity 2-5 [Source:MGI Symbol;Acc:MGI:4439705]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
32 CCTACTATAGTAACTAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
33 >ENSMUST00000193012.1 cds chromosome:GRCm38:12:113469189:113469217:-1 gene:ENSMUSG00000103203.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Gm37327 description:predicted gene, 37327 [Source:MGI Symbol;Acc:MGI:5610555]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
34 AGGCAGCTAGCCTCTGCAGTGCCACAACC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
35 >ENSMUST00000179166.1 cds chromosome:GRCm38:12:113469426:113469435:-1 gene:ENSMUSG00000096396.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd5-2 description:immunoglobulin heavy diversity 5-2 [Source:MGI Symbol;Acc:MGI:4936898]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
36 GAATACCTAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
37 >ENSMUST00000179560.1 cds chromosome:GRCm38:12:113470694:113470710:-1 gene:ENSMUSG00000095444.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd2-4 description:immunoglobulin heavy diversity 2-4 [Source:MGI Symbol;Acc:MGI:4439709]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
38 TCTACTATGATTACGAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
39 >ENSMUST00000177839.1 cds chromosome:GRCm38:12:113475400:113475416:-1 gene:ENSMUSG00000096568.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd2-3 description:immunoglobulin heavy diversity 2-3 [Source:MGI Symbol;Acc:MGI:4439708]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
40 TCTATGATGGTTACTAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
41 >ENSMUST00000103439.1 cds chromosome:GRCm38:12:113482170:113482192:-1 gene:ENSMUSG00000076630.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd1-1 description:immunoglobulin heavy diversity 1-1 [Source:MGI Symbol;Acc:MGI:4439871]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
42 TTTATTACTACGGTAGTAGCTAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
43 >ENSMUST00000180266.1 cds chromosome:GRCm38:12:113525313:113525329:-1 gene:ENSMUSG00000093818.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Ighd3-1 description:immunoglobulin heavy diversity 3-1 [Source:MGI Symbol;Acc:MGI:4439891]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
44 GGCACAGCTCGGGCTAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
45 >ENSMUST00000103441.1 cds chromosome:GRCm38:12:113528032:113528054:-1 gene:ENSMUSG00000076632.1 gene_biotype:IG_D_gene transcript_biotype:IG_D_gene gene_symbol:Gm16968 description:predicted gene, 16968 [Source:MGI Symbol;Acc:MGI:4439892]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
46 TATATAACTAAAGTGGTAGCTCA
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
47 >ENSMUST00000177622.3 cds chromosome:GRCm38:14:53443249:53443839:1 gene:ENSMUSG00000096908.3 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav7-3 description:T cell receptor alpha variable 7-3 [Source:MGI Symbol;Acc:MGI:3649556]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
48 ATGAAATCCTTGAGTGTTTCCCTAGTGGTCCTGTGGCTCCAGTTAAACTGGGTGAACAGC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
49 CAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCATTGTCCCAGAGGGAGCCATGACCTCT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
50 CTCAACTGCACTTTCAGCGACAGTGCTTCTCAGTATTTTGCATGGTACAGACAGCATTCT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
51 GGGAAAGCCCCCAAGGCACTGATGTCCATCTTCTCCAATGGTGAAAAAGAAGAAGGCAGA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
52 TTCACAATTCACCTCAATAAAGCCAGTCTGCATTTCTCCCTGCACATCAGAGACTCCCAG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
53 CCCAGTGACTCTGCTCTCTACCTCTGTGCAGTGAGCA
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
54 >ENSMUST00000180711.2 cds chromosome:GRCm38:14:53454296:53454784:1 gene:ENSMUSG00000094468.5 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav6-4 description:T cell receptor alpha variable 6-4 [Source:MGI Symbol;Acc:MGI:3702153]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
55 ATGAATACTTCTCCAGTTTTAGTAACTGTGATGCTGCTGTTCATGCTTGGGATGAGAAAG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
56 ACCCACGGAGATTCAGTGACCCAGAAACAAGGTCAAGTGACCCTTTCAGAAGATGACTTC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
57 CTATTTATAAATTGCACTTATTCTACCACAACATACCCAACTCTTTTGTGGTATGTCCAA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
58 TATCTTGGACAAGGTCCACAGCTCCTTCTGAAAGTGACAACTGCCAACAATAAGGGAATC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
59 AGCAGAGGCTTTGAAGCTACATATGACAAAGGGACCACGTCCTTCCACTTGCAGAAAGCC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
60 TCAGTGCAGGAGTCAGACTCAGCCGTGTACTTCTGTGCTCTGGTTGA
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
61 >ENSMUST00000181728.2 cds chromosome:GRCm38:14:53461099:53461738:1 gene:ENSMUSG00000094766.3 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav7-4 description:T cell receptor alpha variable 7-4 [Source:MGI Symbol;Acc:MGI:3649611]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
62 ATGAAATCCTTGAGTGTTTCACTAGTGGTCCTGTGGCTCCAGTTAAACTGCGTGAGGAGC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
63 CAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCAGTGTCCCAGAGGGAGGCATGGCCTCT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
64 CTCAACTGCACTTCAAGTGATCGTAATTTTCAGTACTTCTGGTGGTACAGACAGCATTCT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
65 GGAGAAGGCCCCAAGGCACTGATGTCAATCTTCTCTGATGGTGACAAGAAAGAAGGCAGA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
66 TTCACAGCTCACCTCAATAAGGCCAGCCTGCATGTTTCCCTGCACATCAGAGACTCCCAG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
67 CCCAGTGACTCCGCTCTCTACTTCTGTGCAGCTAGTGAGCA
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
68 >ENSMUST00000103643.3 cds chromosome:GRCm38:14:53469756:53470232:1 gene:ENSMUSG00000076831.3 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav8-1 description:T cell receptor alpha variable 8-1 [Source:MGI Symbol;Acc:MGI:3649608]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
69 ATGCACAGCCTCCTGGGGTTGTTGTTGTGGCTGCAACTGACAAGGGTGAATAGTCAACTA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
70 GCAGAAGAGAATTCGTGGGCCCTGAGCGTCCACGAGGGTGAAAGTGTCACGGTGAATTGT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
71 AGTTACAAGACATCCATAACTGCCCTACAGTGGTACAGACAGAAGTCAGGCAAAGGCCCT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
72 GCCCAGCTAATCTTAATACGTTCAAATGAGAGAGAGAAGCGCAATGGAAGACTCAGAGCC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
73 ACCCTTGACACCTCCAGCCAGAGCAGCTCCTTGTCCATCACTGCTACTCGGTGTGAAGAC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
74 ACCGCTGTGTACTTCTGTGCTACTGATG
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
75 >ENSMUST00000103581.5 cds chromosome:GRCm38:14:53488045:53488567:1 gene:ENSMUSG00000096900.3 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav9-1 description:T cell receptor alpha variable 9-1 [Source:MGI Symbol;Acc:MGI:3650356]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
76 ATGCTCCTGGTTCTCATCTCGTTCCTCGGGATACATTTCTTCCTGGATGTCCAAACACAG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
77 ACAGTTTCCCAGTCTGATGCCCATGTCACTGTCTTCGAAGGAGACTCGGTGGAGCTGAGA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
78 TGCAACTATTCCTATGGTGGATCCATTTACCTCTCCTGGTACATCCAGCACCATGGCCAT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
79 GGCCTCCAGTTTCTCCTCAAGTACTATTCGGGAAACCCAGTGGTTCAAGGAGTGAACGGC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
80 TTCGAGGCTGAGTTCAGCAAGAGCGACTCTTCCTTCCACCTTCGGAAAGCCTCTGTGCAC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
81 TGGAGCGACTCGGCTGTGTACTTCTGTGCTGTGAGCG
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
82 >ENSMUST00000181210.2 cds chromosome:GRCm38:14:53491115:53491622:1 gene:ENSMUSG00000096149.5 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav6-5 description:T cell receptor alpha variable 6-5 [Source:MGI Symbol;Acc:MGI:3649609]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
83 ATGAACCTTTGTCCTGAACTGGGTATTCTACTCTTCCTAATGCTTGGAGAAAGCAATGGA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
84 GACTCAGTGACTCAGACAGAAGGCCCAGTGACACTGTCTGAAGGGACTTCTCTGACTGTG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
85 AACTGTTCCTATGAAACCAAACAGTACCCAACCCTGTTCTGGTATGTGCAGTATCCCGGA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
86 GAAGGTCCACAGCTCCTCTTTAAAGTCCCAAAGGCCAACGAGAAGGGAAGCAACAGAGGT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
87 TTTGAAGCTACATACAATAAAGAAGCCACCTCCTTCCACTTGCAGAAAGCCTCAGTGCAA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
88 GAGTCAGACTCGGCTGTGTACTACTGTGCTCTGAGTGA
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
89 >ENSMUST00000103583.4 cds chromosome:GRCm38:14:53505727:53506286:1 gene:ENSMUSG00000096551.2 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav10 description:T cell receptor alpha variable 10 [Source:MGI Symbol;Acc:MGI:3704132]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
90 ATGAAGACATCCCTTCACACTGTATTCCTATTCTTGTGGCTATGGATGGACTGGGAGAGC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
91 CATGGAGAGAAGGTCGAGCAACATGAGTCTACACTGAGTGTTCGAGAGGGAGACAGCGCT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
92 GTCATCAACTGCACTTACACAGATACTGCTTCATCATACTTCCCTTGGTACAAGCAAGAA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
93 GCTGGAAAGAGTCTCCACTTTGTGATAGACATTCGTTCAAATGTGGACAGAAAACAGAGC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
94 CAAAGACTTATAGTTTTGTTGGATAAGAAAGCCAAACGATTCTCCCTGCACATCACAGCC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
95 ACACAGCCTGAAGATTCAGCCATCTACTTCTGTGCAGCAAGCA
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
96 >ENSMUST00000103584.3 cds chromosome:GRCm38:14:53516929:53517366:1 gene:ENSMUSG00000095862.1 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav6-6 description:T cell receptor alpha variable 6-6 [Source:MGI Symbol;Acc:MGI:4439905]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
97 ATGGACTCTTCTCCAGGCTTCGTGGCTGTGATACTTCTCATACTTGGAAGGACCCACGGA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
98 GATTCCGTGACTCAAACAGAAGGCCCAGTGACCGTCTCAGAAAGCGAGTCCCTGATAATA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
99 AATTGCACGTATTCAGCCACAAGCATAGCTTACCCTAATCTTTTCTGGTATGTTCGATAT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
100 CCTGGAGAAGGTCTACAACTCCTCCTGAAAGTCATTACGGCTGGCCAGAAGGGAAGCAGC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
101 AGAGGGTTTGAAGCCACATACAATAAAGAAACCACCTCCTTCCACTTGCAGAAAGCCTCA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
102 GTGCAAGAGTCAGACTCGGCTGTGTACTACTGTGCTCTGGGTGA
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
103 >ENSMUST00000103585.3 cds chromosome:GRCm38:14:53519303:53519859:1 gene:ENSMUSG00000096615.1 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav11 description:T cell receptor alpha variable 11 [Source:MGI Symbol;Acc:MGI:3642163]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
104 ATGAAAAAGCGCCTGAGTGCCTGCTGGGTGGTCTTGTGGCTGCATTATCAGTGGGTGGCT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
105 GGCAAGACCCAAGTGGAGCAGAGTCCTCAGTCCCTGGTTGTCCGTCAGGGAGAGAACTGC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
106 GTCCTTCAATGTAATTACAGTGTGACCCCCGACAACCACTTAAGGTGGTTCAAACAGGAC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
107 ACAGGCAAAGGTCTTGTGTCCCTGACAGTCCTGGTTGACCAAAAAGACAAAACGTCAAAT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
108 GGGAGATACTCAGCAACTCTGGATAAAGATGCTAAGCACAGCACGCTGCACATCACAGCC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
109 ACCCTGCTGGATGACACTGCCACCTACATCTGTGTGGTGGGCG
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
110 >ENSMUST00000200609.1 cds chromosome:GRCm38:14:53530786:53531313:1 gene:ENSMUSG00000106620.1 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav7-5 description:T cell receptor alpha variable 7-5 [Source:MGI Symbol;Acc:MGI:3648929]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
111 ATGAAATCCTTGAGTGTTTCACTAGTGGTCCTGTGGCTCCAGTTTAATTGGGTGAGCAGC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
112 CAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCACTGTCTCAGAGGGAGCCATGGCCTCT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
113 CTCAACTGCACGTTCAGTGATGGTACTTCTAACAACTTCAGGTGGTACAGACAGCATTCT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
114 GCGAAAGGCCTTGAGGTGCTAGTGTCCATCTTCTCTGATGGTGAAAAGGAAGAAGGCAGA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
115 TTTACAGCTCACCTCAATAGAGCCAACTTGCATGTTTCCCTACACATCAGAGAACCACAA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
116 CCCAGTGACTCTGCTGTCTACCTCTGTGCAGTGAGCA
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
117 >ENSMUST00000200115.1 cds chromosome:GRCm38:14:53538191:53538738:1 gene:ENSMUSG00000096825.2 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav12-1 description:T cell receptor alpha variable 12-1 [Source:MGI Symbol;Acc:MGI:4440525]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
118 ATGAACATGCGTCCTGTCACCTCCTCAGTTCTCGTGCTCCTCCTAATGCTCAGAAGGAGC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
119 AATGGAGACTCCGTGACCCAGACAGAAGGCCTGGTCACTGTCACCGAGGGGTTGCCTGTG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
120 AAGCTGAACTGCACCTATCAGACTACTTATTTAACTATTGCCTTTTTCTGGTATGTGCAA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
121 TATCTCAACGAAGCCCCTCAGGTACTCCTGAAGAGCTCCACAGACAACAAGAGGACCGAG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
122 CACCAAGGGTTCCACGCCACTCTCCATAAGAGCAGCAGCTCCTTCCATCTGCAGAAGTCC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
123 TCAGCGCAGCTGTCAGACTCTGCCCTGTACTACTGTGCTCTGAGTGA
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
124 >ENSMUST00000103651.3 cds chromosome:GRCm38:14:53545014:53545525:1 gene:ENSMUSG00000076839.3 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav13-1 description:T cell receptor alpha variable 13-1 [Source:MGI Symbol;Acc:MGI:4439904]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
125 ATGAAGAGGCTGCTGAGCTCTCTGCTGGGGCTTCTGTGCACCCAGGTTTGCTGGGTGAAA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
126 GGACAGCAAGTGCAGCAGAGCCCCGCGTCCTTGGTTCTGCAGGAGGGGGAGAACGCAGAG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
127 CTGCAGTGTAACTTTTCCACATCTTTGAACAGTATGCAGTGGTTTTACCAACGTCCTGGG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
128 GGAAGTCTCGTCAGCCTGTTCTACAATCCTTCTGGGACAAAGCATAGTGGGAGACTGACA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
129 TCCACTACAGTCATCAAAGAACGTCGCAGCTCTTTGCACATTTCCTCCTCCCAGACAACA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
130 GACTCAGGCACTTATCTCTGTGCTTTGGAAC
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
131 >ENSMUST00000198297.1 cds chromosome:GRCm38:14:53554022:53554558:1 gene:ENSMUSG00000076840.4 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav14-1 description:T cell receptor alpha variable 14-1 [Source:MGI Symbol;Acc:MGI:3646773]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
132 ATGGACAAGATTCTGACAGCATCATTTTTACTCCTAGGCCTTCACCTAGCTGGGGTGAAT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
133 GGCCAGCAGAAGGAGAAACATGACCAGCAGCAGGTGAGACAAAGTCCCCAATCTCTGACA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
134 GTCTGGGAAGGAGGAACCACAGTTCTGACCTGCAGTTATGAGGACAGCACTTTTAACTAC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
135 TTCCCATGGTACCAACAGTTCCCTGGGGAAGGCCCTGCACTTCTGATATCCATACTTTCA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
136 GTGTCCGATAAAAAGGAAGATGGACGATTCACAACCTTCTTCAATAAAAGGGAGAAAAAG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
137 CTCTCCTTGCACATCATAGACTCTCAGCCTGGAGACTCAGCCACCTACTTCTGTGCAGCA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
138 AGTG
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
139 >ENSMUST00000200101.1 cds chromosome:GRCm38:14:53559632:53560247:1 gene:ENSMUSG00000094016.2 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav15-1-dv6-1 description:T cell receptor alpha variable 15-1-DV6-1 [Source:MGI Symbol;Acc:MGI:4439369]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
140 ATGCCTCCTCACAGCCTGCTCTGTGTGCTGGTGGCCTTGGCTTTCTCTGGATCTAATGTG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
141 GCCCAGAAAGTGATTCAGGTCTGGTCAACAACAAGCAGGCAGGAGGGCGAAAAACTCACA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
142 CTGGACTGTTCATATAAGACAAGTCAGGTCTTATACCATCTTTTCTGGTACAAGCACCTT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
143 CTTAGTGGAGAGATGGTTTTGCTTATTCGACAAATGCCTTCTACTATTGCAATAGAGAGG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
144 AGCGGCCGCTATTCTGTAGTCTTCCAGAAATCACGCAAATCCATCAGCCTTGTCATTTCA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
145 ACCTTACAACCAGACGATTCGGGAAAGTATTTCTGTGCTCTCTGGGAGCTGG
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
146 >ENSMUST00000103654.2 cds chromosome:GRCm38:14:53590857:53591514:1 gene:ENSMUSG00000094966.2 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav9-2 description:T cell receptor alpha variable 9-2 [Source:MGI Symbol;Acc:MGI:4439903]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
147 ATGCTCCTGGCGCTCCTCCCAGTGCTGGGGATACACTTTGTCCTGAGAGATGCCCAAGCT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
148 CAGTCAGTGACGCAGCCCGATGCTCGCGTCACTGTCTCTGAAGGAGCCTCTCTGCAGCTG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
149 AGATGCAAGTATTCCTACTCTGGGACACCTTATCTGTTCTGGTATGTCCAGTACCCGCGG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
150 CAGGGGCTGCAGCTGCTCCTCAAGTACTATTCAGGAGACCCAGTGGTTCAAGGAGTGAAT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
151 GGCTTCGAGGCTGAGTTCAGCAAGAGTAACTCTTCCTTCCACCTGCGGAAAGCCTCTGTG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
152 CACTGGAGCGACTCTGCTGTGTACTTCTGTGTTTTGAGCG
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
153 >ENSMUST00000103655.2 cds chromosome:GRCm38:14:53598828:53599410:1 gene:ENSMUSG00000093966.2 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav4-3 description:T cell receptor alpha variable 4-3 [Source:MGI Symbol;Acc:MGI:4440478]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
154 ATGCAGAGGAACCTGGGAGCTGTGCTGGGGATTCTGTGGGTGCAGATTTGCTGGGTGAGC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
155 GGAGATAAGGTGAAACAAAGTCCCTCAGCGCTGAGTCTCCAAGAAGGAACCAATTCTGCT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
156 CTGAGATGCAATTTTTCTATCGCCGCGACAACTGTGCAGTGGTTCCTACAGAATCCCAGG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
157 GGCAGCCTCATCAATCTTTTTTACCTGGTTCCAGGAACAAAGGAGAATGGGAGGTTAAAG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
158 TCAGCATTCGATTCTAAGGAGAGCTACAGCACCCTGCACATCAGGGATGCCCAGCTGGAG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
159 GACTCAGGCACTTACTTCTGTGCTGCTGAGG
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
160 >ENSMUST00000180972.2 cds chromosome:GRCm38:14:53616315:53616914:1 gene:ENSMUSG00000096656.6 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav12-2 description:T cell receptor alpha variable 12-2 [Source:MGI Symbol;Acc:MGI:5293447]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
161 ATGAACATGCGTCCTGACACCTGCTCAGTTCTTGTGCTCCTCTTAATGCTCAGAAGGAAC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
162 AATGGAGACTCTGTGACCCAGACAGAAGGCCTGGTCACTCTCACCGAGGGGTTGCCTGTG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
163 ATGCTGAACTGCACCTATCAGAGTACTTACTCACCTTTCCTTTTCTGGTATGTGCAACAT
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
164 CTCAACGAAGCCCCTAAGCTACTTTTGAAGAGCTTCACAGACAACAAGAGGCCCGAGCAC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
165 CAAGGGTTCCACGCCACTCTCCATAAGAGCAGCAGCTCCTTCCATCTGCAGAAGTCCTCA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
166 GCGCAGCTGTCAGACTCTGCCCTGTACTACTGTGCTTTGAGTGA
2
6cf9f7f6509c planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 651fae48371f845578753052c6fe173e3bb35670
earlhaminst
parents: 0
diff changeset
167 >ENSMUST00000103657.5 cds chromosome:GRCm38:14:53621657:53622245:1 gene:ENSMUSG00000095958.3 gene_biotype:TR_V_gene transcript_biotype:TR_V_gene gene_symbol:Trav12-3 description:T cell receptor alpha variable 12-3 [Source:MGI Symbol;Acc:MGI:3648633]
0
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
168 ATGCGTCCTGGCACCTGCTCAGTTCTTGTGCTCCTCCTAATGCTCAGGAGGAGCAATGGA
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
169 GATGGAGACTCAGTGACCCAGAAGGAAGGCCTGGTCACTCTCACCGAGGGGTTGCCTGTG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
170 ATGCTGAACTGCACCTATCAGACTATTTACTCAAATGCTTTCCTTTTCTGGTATGTGCAC
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
171 TATCTCAATGAATCCCCTCGGCTACTCCTGAAGAGCTCCACAGACAACAAGAGGACCGAG
4dba69135845 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
earlhaminst
parents:
diff changeset
172 CACCAAGGGTTCCACGCCACTCTCCATAAGAGCAGCAGCTCCTTCCATCTGCAGAAGTCC