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diff test-data/Mus_musculus.GRCm38.cds.longest.fa @ 0:4dba69135845 draft

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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ensembl_longest_cds_per_gene commit 26c70aecb56c19099455bb5a432615b09ad322d1
author earlhaminst
date Tue, 07 Mar 2017 05:54:30 -0500
parents
children 6cf9f7f6509c
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line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/Mus_musculus.GRCm38.cds.longest.fa	Tue Mar 07 05:54:30 2017 -0500
@@ -0,0 +1,172 @@
+>ENSMUST00000196221
+ATGGCATAT
+>ENSMUST00000177564
+ATCGGAGGGATACGAG
+>ENSMUST00000178537
+GGGACAGGGGGC
+>ENSMUST00000178862
+GGGACTGGGGGGGC
+>ENSMUST00000179520
+CTAACTGGGAC
+>ENSMUST00000179883
+AGACAGCTCAGGCTAC
+>ENSMUST00000195858
+GAATACCTAC
+>ENSMUST00000180001
+TCTACTATGGTAACTAC
+>ENSMUST00000178815
+GACTACCTAC
+>ENSMUST00000177965
+TCTACTATGGTTACGAC
+>ENSMUST00000178909
+AGACAGCTAGCCTCTGCAGTGCCACAACC
+>ENSMUST00000177646
+GAATACCTAC
+>ENSMUST00000178230
+CCTACTATAGTAACTAC
+>ENSMUST00000178483
+AGGCAGCTAGCCTCTGCAGTGCCACAACC
+>ENSMUST00000179262
+GAATACCTAC
+>ENSMUST00000178549
+CCTACTATAGTAACTAC
+>ENSMUST00000193012
+AGGCAGCTAGCCTCTGCAGTGCCACAACC
+>ENSMUST00000179166
+GAATACCTAC
+>ENSMUST00000179560
+TCTACTATGATTACGAC
+>ENSMUST00000177839
+TCTATGATGGTTACTAC
+>ENSMUST00000103439
+TTTATTACTACGGTAGTAGCTAC
+>ENSMUST00000180266
+GGCACAGCTCGGGCTAC
+>ENSMUST00000103441
+TATATAACTAAAGTGGTAGCTCA
+>ENSMUST00000177622
+ATGAAATCCTTGAGTGTTTCCCTAGTGGTCCTGTGGCTCCAGTTAAACTGGGTGAACAGC
+CAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCATTGTCCCAGAGGGAGCCATGACCTCT
+CTCAACTGCACTTTCAGCGACAGTGCTTCTCAGTATTTTGCATGGTACAGACAGCATTCT
+GGGAAAGCCCCCAAGGCACTGATGTCCATCTTCTCCAATGGTGAAAAAGAAGAAGGCAGA
+TTCACAATTCACCTCAATAAAGCCAGTCTGCATTTCTCCCTGCACATCAGAGACTCCCAG
+CCCAGTGACTCTGCTCTCTACCTCTGTGCAGTGAGCA
+>ENSMUST00000180711
+ATGAATACTTCTCCAGTTTTAGTAACTGTGATGCTGCTGTTCATGCTTGGGATGAGAAAG
+ACCCACGGAGATTCAGTGACCCAGAAACAAGGTCAAGTGACCCTTTCAGAAGATGACTTC
+CTATTTATAAATTGCACTTATTCTACCACAACATACCCAACTCTTTTGTGGTATGTCCAA
+TATCTTGGACAAGGTCCACAGCTCCTTCTGAAAGTGACAACTGCCAACAATAAGGGAATC
+AGCAGAGGCTTTGAAGCTACATATGACAAAGGGACCACGTCCTTCCACTTGCAGAAAGCC
+TCAGTGCAGGAGTCAGACTCAGCCGTGTACTTCTGTGCTCTGGTTGA
+>ENSMUST00000181728
+ATGAAATCCTTGAGTGTTTCACTAGTGGTCCTGTGGCTCCAGTTAAACTGCGTGAGGAGC
+CAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCAGTGTCCCAGAGGGAGGCATGGCCTCT
+CTCAACTGCACTTCAAGTGATCGTAATTTTCAGTACTTCTGGTGGTACAGACAGCATTCT
+GGAGAAGGCCCCAAGGCACTGATGTCAATCTTCTCTGATGGTGACAAGAAAGAAGGCAGA
+TTCACAGCTCACCTCAATAAGGCCAGCCTGCATGTTTCCCTGCACATCAGAGACTCCCAG
+CCCAGTGACTCCGCTCTCTACTTCTGTGCAGCTAGTGAGCA
+>ENSMUST00000103643
+ATGCACAGCCTCCTGGGGTTGTTGTTGTGGCTGCAACTGACAAGGGTGAATAGTCAACTA
+GCAGAAGAGAATTCGTGGGCCCTGAGCGTCCACGAGGGTGAAAGTGTCACGGTGAATTGT
+AGTTACAAGACATCCATAACTGCCCTACAGTGGTACAGACAGAAGTCAGGCAAAGGCCCT
+GCCCAGCTAATCTTAATACGTTCAAATGAGAGAGAGAAGCGCAATGGAAGACTCAGAGCC
+ACCCTTGACACCTCCAGCCAGAGCAGCTCCTTGTCCATCACTGCTACTCGGTGTGAAGAC
+ACCGCTGTGTACTTCTGTGCTACTGATG
+>ENSMUST00000103581
+ATGCTCCTGGTTCTCATCTCGTTCCTCGGGATACATTTCTTCCTGGATGTCCAAACACAG
+ACAGTTTCCCAGTCTGATGCCCATGTCACTGTCTTCGAAGGAGACTCGGTGGAGCTGAGA
+TGCAACTATTCCTATGGTGGATCCATTTACCTCTCCTGGTACATCCAGCACCATGGCCAT
+GGCCTCCAGTTTCTCCTCAAGTACTATTCGGGAAACCCAGTGGTTCAAGGAGTGAACGGC
+TTCGAGGCTGAGTTCAGCAAGAGCGACTCTTCCTTCCACCTTCGGAAAGCCTCTGTGCAC
+TGGAGCGACTCGGCTGTGTACTTCTGTGCTGTGAGCG
+>ENSMUST00000181210
+ATGAACCTTTGTCCTGAACTGGGTATTCTACTCTTCCTAATGCTTGGAGAAAGCAATGGA
+GACTCAGTGACTCAGACAGAAGGCCCAGTGACACTGTCTGAAGGGACTTCTCTGACTGTG
+AACTGTTCCTATGAAACCAAACAGTACCCAACCCTGTTCTGGTATGTGCAGTATCCCGGA
+GAAGGTCCACAGCTCCTCTTTAAAGTCCCAAAGGCCAACGAGAAGGGAAGCAACAGAGGT
+TTTGAAGCTACATACAATAAAGAAGCCACCTCCTTCCACTTGCAGAAAGCCTCAGTGCAA
+GAGTCAGACTCGGCTGTGTACTACTGTGCTCTGAGTGA
+>ENSMUST00000103583
+ATGAAGACATCCCTTCACACTGTATTCCTATTCTTGTGGCTATGGATGGACTGGGAGAGC
+CATGGAGAGAAGGTCGAGCAACATGAGTCTACACTGAGTGTTCGAGAGGGAGACAGCGCT
+GTCATCAACTGCACTTACACAGATACTGCTTCATCATACTTCCCTTGGTACAAGCAAGAA
+GCTGGAAAGAGTCTCCACTTTGTGATAGACATTCGTTCAAATGTGGACAGAAAACAGAGC
+CAAAGACTTATAGTTTTGTTGGATAAGAAAGCCAAACGATTCTCCCTGCACATCACAGCC
+ACACAGCCTGAAGATTCAGCCATCTACTTCTGTGCAGCAAGCA
+>ENSMUST00000103584
+ATGGACTCTTCTCCAGGCTTCGTGGCTGTGATACTTCTCATACTTGGAAGGACCCACGGA
+GATTCCGTGACTCAAACAGAAGGCCCAGTGACCGTCTCAGAAAGCGAGTCCCTGATAATA
+AATTGCACGTATTCAGCCACAAGCATAGCTTACCCTAATCTTTTCTGGTATGTTCGATAT
+CCTGGAGAAGGTCTACAACTCCTCCTGAAAGTCATTACGGCTGGCCAGAAGGGAAGCAGC
+AGAGGGTTTGAAGCCACATACAATAAAGAAACCACCTCCTTCCACTTGCAGAAAGCCTCA
+GTGCAAGAGTCAGACTCGGCTGTGTACTACTGTGCTCTGGGTGA
+>ENSMUST00000103585
+ATGAAAAAGCGCCTGAGTGCCTGCTGGGTGGTCTTGTGGCTGCATTATCAGTGGGTGGCT
+GGCAAGACCCAAGTGGAGCAGAGTCCTCAGTCCCTGGTTGTCCGTCAGGGAGAGAACTGC
+GTCCTTCAATGTAATTACAGTGTGACCCCCGACAACCACTTAAGGTGGTTCAAACAGGAC
+ACAGGCAAAGGTCTTGTGTCCCTGACAGTCCTGGTTGACCAAAAAGACAAAACGTCAAAT
+GGGAGATACTCAGCAACTCTGGATAAAGATGCTAAGCACAGCACGCTGCACATCACAGCC
+ACCCTGCTGGATGACACTGCCACCTACATCTGTGTGGTGGGCG
+>ENSMUST00000200609
+ATGAAATCCTTGAGTGTTTCACTAGTGGTCCTGTGGCTCCAGTTTAATTGGGTGAGCAGC
+CAGCAGAAGGTGCAGCAGAGCCCAGAATCCCTCACTGTCTCAGAGGGAGCCATGGCCTCT
+CTCAACTGCACGTTCAGTGATGGTACTTCTAACAACTTCAGGTGGTACAGACAGCATTCT
+GCGAAAGGCCTTGAGGTGCTAGTGTCCATCTTCTCTGATGGTGAAAAGGAAGAAGGCAGA
+TTTACAGCTCACCTCAATAGAGCCAACTTGCATGTTTCCCTACACATCAGAGAACCACAA
+CCCAGTGACTCTGCTGTCTACCTCTGTGCAGTGAGCA
+>ENSMUST00000200115
+ATGAACATGCGTCCTGTCACCTCCTCAGTTCTCGTGCTCCTCCTAATGCTCAGAAGGAGC
+AATGGAGACTCCGTGACCCAGACAGAAGGCCTGGTCACTGTCACCGAGGGGTTGCCTGTG
+AAGCTGAACTGCACCTATCAGACTACTTATTTAACTATTGCCTTTTTCTGGTATGTGCAA
+TATCTCAACGAAGCCCCTCAGGTACTCCTGAAGAGCTCCACAGACAACAAGAGGACCGAG
+CACCAAGGGTTCCACGCCACTCTCCATAAGAGCAGCAGCTCCTTCCATCTGCAGAAGTCC
+TCAGCGCAGCTGTCAGACTCTGCCCTGTACTACTGTGCTCTGAGTGA
+>ENSMUST00000103651
+ATGAAGAGGCTGCTGAGCTCTCTGCTGGGGCTTCTGTGCACCCAGGTTTGCTGGGTGAAA
+GGACAGCAAGTGCAGCAGAGCCCCGCGTCCTTGGTTCTGCAGGAGGGGGAGAACGCAGAG
+CTGCAGTGTAACTTTTCCACATCTTTGAACAGTATGCAGTGGTTTTACCAACGTCCTGGG
+GGAAGTCTCGTCAGCCTGTTCTACAATCCTTCTGGGACAAAGCATAGTGGGAGACTGACA
+TCCACTACAGTCATCAAAGAACGTCGCAGCTCTTTGCACATTTCCTCCTCCCAGACAACA
+GACTCAGGCACTTATCTCTGTGCTTTGGAAC
+>ENSMUST00000198297
+ATGGACAAGATTCTGACAGCATCATTTTTACTCCTAGGCCTTCACCTAGCTGGGGTGAAT
+GGCCAGCAGAAGGAGAAACATGACCAGCAGCAGGTGAGACAAAGTCCCCAATCTCTGACA
+GTCTGGGAAGGAGGAACCACAGTTCTGACCTGCAGTTATGAGGACAGCACTTTTAACTAC
+TTCCCATGGTACCAACAGTTCCCTGGGGAAGGCCCTGCACTTCTGATATCCATACTTTCA
+GTGTCCGATAAAAAGGAAGATGGACGATTCACAACCTTCTTCAATAAAAGGGAGAAAAAG
+CTCTCCTTGCACATCATAGACTCTCAGCCTGGAGACTCAGCCACCTACTTCTGTGCAGCA
+AGTG
+>ENSMUST00000200101
+ATGCCTCCTCACAGCCTGCTCTGTGTGCTGGTGGCCTTGGCTTTCTCTGGATCTAATGTG
+GCCCAGAAAGTGATTCAGGTCTGGTCAACAACAAGCAGGCAGGAGGGCGAAAAACTCACA
+CTGGACTGTTCATATAAGACAAGTCAGGTCTTATACCATCTTTTCTGGTACAAGCACCTT
+CTTAGTGGAGAGATGGTTTTGCTTATTCGACAAATGCCTTCTACTATTGCAATAGAGAGG
+AGCGGCCGCTATTCTGTAGTCTTCCAGAAATCACGCAAATCCATCAGCCTTGTCATTTCA
+ACCTTACAACCAGACGATTCGGGAAAGTATTTCTGTGCTCTCTGGGAGCTGG
+>ENSMUST00000103654
+ATGCTCCTGGCGCTCCTCCCAGTGCTGGGGATACACTTTGTCCTGAGAGATGCCCAAGCT
+CAGTCAGTGACGCAGCCCGATGCTCGCGTCACTGTCTCTGAAGGAGCCTCTCTGCAGCTG
+AGATGCAAGTATTCCTACTCTGGGACACCTTATCTGTTCTGGTATGTCCAGTACCCGCGG
+CAGGGGCTGCAGCTGCTCCTCAAGTACTATTCAGGAGACCCAGTGGTTCAAGGAGTGAAT
+GGCTTCGAGGCTGAGTTCAGCAAGAGTAACTCTTCCTTCCACCTGCGGAAAGCCTCTGTG
+CACTGGAGCGACTCTGCTGTGTACTTCTGTGTTTTGAGCG
+>ENSMUST00000103655
+ATGCAGAGGAACCTGGGAGCTGTGCTGGGGATTCTGTGGGTGCAGATTTGCTGGGTGAGC
+GGAGATAAGGTGAAACAAAGTCCCTCAGCGCTGAGTCTCCAAGAAGGAACCAATTCTGCT
+CTGAGATGCAATTTTTCTATCGCCGCGACAACTGTGCAGTGGTTCCTACAGAATCCCAGG
+GGCAGCCTCATCAATCTTTTTTACCTGGTTCCAGGAACAAAGGAGAATGGGAGGTTAAAG
+TCAGCATTCGATTCTAAGGAGAGCTACAGCACCCTGCACATCAGGGATGCCCAGCTGGAG
+GACTCAGGCACTTACTTCTGTGCTGCTGAGG
+>ENSMUST00000180972
+ATGAACATGCGTCCTGACACCTGCTCAGTTCTTGTGCTCCTCTTAATGCTCAGAAGGAAC
+AATGGAGACTCTGTGACCCAGACAGAAGGCCTGGTCACTCTCACCGAGGGGTTGCCTGTG
+ATGCTGAACTGCACCTATCAGAGTACTTACTCACCTTTCCTTTTCTGGTATGTGCAACAT
+CTCAACGAAGCCCCTAAGCTACTTTTGAAGAGCTTCACAGACAACAAGAGGCCCGAGCAC
+CAAGGGTTCCACGCCACTCTCCATAAGAGCAGCAGCTCCTTCCATCTGCAGAAGTCCTCA
+GCGCAGCTGTCAGACTCTGCCCTGTACTACTGTGCTTTGAGTGA
+>ENSMUST00000103657
+ATGCGTCCTGGCACCTGCTCAGTTCTTGTGCTCCTCCTAATGCTCAGGAGGAGCAATGGA
+GATGGAGACTCAGTGACCCAGAAGGAAGGCCTGGTCACTCTCACCGAGGGGTTGCCTGTG
+ATGCTGAACTGCACCTATCAGACTATTTACTCAAATGCTTTCCTTTTCTGGTATGTGCAC
+TATCTCAATGAATCCCCTCGGCTACTCCTGAAGAGCTCCACAGACAACAAGAGGACCGAG
+CACCAAGGGTTCCACGCCACTCTCCATAAGAGCAGCAGCTCCTTCCATCTGCAGAAGTCC