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comparison ete_init_taxdb.xml @ 3:077021c45b96 draft

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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit a22e605b871c2185e98d89598aebb2fa3a82bb8f
author earlhaminst
date Mon, 12 Mar 2018 12:51:48 -0400
parents 03c10736e497
children d40b9a7debe5
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2:03c10736e497 3:077021c45b96
32 <param name="taxdump" ftype="tar" value="taxdump.tar.gz" /> 32 <param name="taxdump" ftype="tar" value="taxdump.tar.gz" />
33 <output name="database" file="taxdump.sqlite" compare="sim_size" /> 33 <output name="database" file="taxdump.sqlite" compare="sim_size" />
34 </test> 34 </test>
35 </tests> 35 </tests>
36 <help><![CDATA[ 36 <help><![CDATA[
37 Generates the ETE sqlite data base from the NCBI taxdump.tar.gz using the .. _ETE Toolkit: http://etetoolkit.org/ 37 Generates the ETE sqlite data base from the NCBI taxdump.tar.gz using the `ETE Toolkit`_.
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39 .. _ETE Toolkit: http://etetoolkit.org/
38 40
39 **Input** 41 **Input**
40 42
41 - NCBI taxdump: NCBI taxdump in tar.gz format. If not given the latest is downloaded from ftp://ftp.ncbi.nih.gov/pub/taxonomy/taxdump.tar.gz 43 - NCBI taxdump: NCBI taxdump in tar.gz format. If not given the latest is downloaded from ftp://ftp.ncbi.nih.gov/pub/taxonomy/taxdump.tar.gz
42 44