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comparison ete_homology_classifier.xml @ 16:e4d5d9a69c9d draft default tip

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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/main/tools/ete commit a0d7ab86b86bb764e457767bf8e8bc29868d0cbb
author earlhaminst
date Mon, 10 Mar 2025 23:28:17 +0000
parents 1e85af7a29c4
children
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15:1e85af7a29c4 16:e4d5d9a69c9d
1 <tool id="ete_homology_classifier" name="Homology Classifier and Filter" version="@VERSION@"> 1 <tool id="ete_homology_classifier" name="Homology Classifier and Filter" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
2 <description>from a genetree using the ETE Toolkit</description> 2 <description>from a genetree using the ETE Toolkit</description>
3 <macros> 3 <macros>
4 <import>ete_macros.xml</import> 4 <import>ete_macros.xml</import>
5 <xml name="homologies_macro" token_label="" token_help=""> 5 <xml name="homologies_macro" token_label="" token_help="">
6 <param name="homologies" type="select" multiple="true" optional="false" label="@LABEL@" help="@HELP@"> 6 <param name="homologies" type="select" multiple="true" optional="false" label="@LABEL@" help="@HELP@">
48 </data> 48 </data>
49 </outputs> 49 </outputs>
50 <tests> 50 <tests>
51 <test> 51 <test>
52 <param name="genetreeFile" ftype="nhx" value="genetree.nhx" /> 52 <param name="genetreeFile" ftype="nhx" value="genetree.nhx" />
53 <param name="out_format" value="tabular"/> 53 <conditional name="format_type">
54 <param name="homologies" value="one-to-one,one-to-many,many-to-one,many-to-many,paralogs" /> 54 <param name="out_format" value="tabular"/>
55 <param name="homologies" value="one-to-one,one-to-many,many-to-one,many-to-many,paralogs" />
56 </conditional>
55 <output name="homology" file="11_homology.tabular" /> 57 <output name="homology" file="11_homology.tabular" />
56 </test> 58 </test>
57 <test> 59 <test>
58 <param name="genetreeFile" ftype="nhx" value="11_genetree.nhx" /> 60 <param name="genetreeFile" ftype="nhx" value="11_genetree.nhx" />
59 <param name="out_format" value="csv"/> 61 <conditional name="format_type">
62 <param name="out_format" value="csv"/>
63 </conditional>
60 <output name="homology" file="11_homology.csv" /> 64 <output name="homology" file="11_homology.csv" />
61 </test> 65 </test>
62 </tests> 66 </tests>
63 <help> 67 <help>
64 <![CDATA[ 68 <![CDATA[