diff test-data/lineage-compress.txt @ 2:03c10736e497 draft

planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 91b634b8f9b131045bbbbf43cc8edbea59ac686b-dirty
author earlhaminst
date Tue, 07 Nov 2017 11:45:13 -0500
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children 87b6de3ef63e
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/lineage-compress.txt	Tue Nov 07 11:45:13 2017 -0500
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+Latimeria chalumnae	Eukaryota	Chordata	NA	Coelacanthiformes	Coelacanthidae	Latimeria	Latimeria chalumnae
+Xenopus tropicalis	Eukaryota	Chordata	Amphibia	Batrachia	Pipoidea	Xenopus	Xenopus tropicalis
+Ornithorhynchus anatinus	Eukaryota	Chordata	Mammalia	Monotremata	Ornithorhynchidae	Ornithorhynchus	Ornithorhynchus anatinus
+Macropus eugenii	Eukaryota	Chordata	Mammalia	Diprotodontia	Macropodidae	Notamacropus	Notamacropus eugenii
+Sarcophilus harrisii	Eukaryota	Chordata	Mammalia	Dasyuromorphia	Dasyuridae	Sarcophilus	Sarcophilus harrisii
+Monodelphis domestica	Eukaryota	Chordata	Mammalia	Didelphimorphia	Didelphidae	Monodelphis	Monodelphis domestica
+Echinops telfairi	Eukaryota	Chordata	Mammalia	Afrotheria	Tenrecidae	Echinops	Echinops telfairi
+Procavia capensis	Eukaryota	Chordata	Mammalia	Afrotheria	Procaviidae	Procavia	Procavia capensis
+Loxodonta africana	Eukaryota	Chordata	Mammalia	Afrotheria	Elephantidae	Loxodonta	Loxodonta africana
+Dasypus novemcinctus	Eukaryota	Chordata	Mammalia	Xenarthra	Dasypodidae	Dasypus	Dasypus novemcinctus
+Choloepus hoffmanni	Eukaryota	Chordata	Mammalia	Xenarthra	Megalonychidae	Choloepus	Choloepus hoffmanni
+Ochotona princeps	Eukaryota	Chordata	Mammalia	Euarchontoglires	Ochotonidae	Ochotona	Ochotona princeps
+Oryctolagus cuniculus	Eukaryota	Chordata	Mammalia	Euarchontoglires	Leporidae	Oryctolagus	Oryctolagus cuniculus
+Cavia porcellus	Eukaryota	Chordata	Mammalia	Euarchontoglires	Caviidae	Cavia	Cavia porcellus
+Ictidomys tridecemlineatus	Eukaryota	Chordata	Mammalia	Euarchontoglires	Sciuridae	Ictidomys	Ictidomys tridecemlineatus
+Dipodomys ordii	Eukaryota	Chordata	Mammalia	Euarchontoglires	Heteromyidae	Dipodomys	Dipodomys ordii
+Rattus norvegicus	Eukaryota	Chordata	Mammalia	Euarchontoglires	Muridae	Rattus	Rattus norvegicus
+Mus musculus	Eukaryota	Chordata	Mammalia	Euarchontoglires	Muridae	Mus	Mus musculus
+Tupaia belangeri	Eukaryota	Chordata	Mammalia	Euarchontoglires	Tupaiidae	Tupaia	Tupaia belangeri
+Otolemur garnettii	Eukaryota	Chordata	Mammalia	Euarchontoglires	Galagidae	Otolemur	Otolemur garnettii
+Microcebus murinus	Eukaryota	Chordata	Mammalia	Euarchontoglires	Cheirogaleidae	Microcebus	Microcebus murinus
+Tarsius syrichta	Eukaryota	Chordata	Mammalia	Euarchontoglires	Tarsiidae	Carlito	Carlito syrichta
+Callithrix jacchus	Eukaryota	Chordata	Mammalia	Euarchontoglires	Cebidae	Callithrix	Callithrix jacchus
+Chlorocebus sabaeus	Eukaryota	Chordata	Mammalia	Euarchontoglires	Cercopithecoidea	Chlorocebus	Chlorocebus sabaeus
+Papio anubis	Eukaryota	Chordata	Mammalia	Euarchontoglires	Cercopithecoidea	Papio	Papio anubis
+Macaca mulatta	Eukaryota	Chordata	Mammalia	Euarchontoglires	Cercopithecoidea	Macaca	Macaca mulatta
+Nomascus leucogenys	Eukaryota	Chordata	Mammalia	Euarchontoglires	Hominoidea	Nomascus	Nomascus leucogenys
+Pongo abelii	Eukaryota	Chordata	Mammalia	Euarchontoglires	Hominoidea	Pongo	Pongo abelii
+Gorilla gorilla gorilla	Eukaryota	Chordata	Mammalia	Euarchontoglires	Hominoidea	Gorilla	Gorilla gorilla
+Pan troglodytes	Eukaryota	Chordata	Mammalia	Euarchontoglires	Hominoidea	Pan	Pan troglodytes
+Homo sapiens	Eukaryota	Chordata	Mammalia	Euarchontoglires	Hominoidea	Homo	Homo sapiens
+Sorex araneus	Eukaryota	Chordata	Mammalia	Laurasiatheria	Soricidae	Sorex	Sorex araneus
+Erinaceus europaeus	Eukaryota	Chordata	Mammalia	Laurasiatheria	Erinaceidae	Erinaceus	Erinaceus europaeus
+Pteropus vampyrus	Eukaryota	Chordata	Mammalia	Laurasiatheria	Pteropodidae	Pteropus	Pteropus vampyrus
+Myotis lucifugus	Eukaryota	Chordata	Mammalia	Laurasiatheria	Vespertilionidae	Myotis	Myotis lucifugus
+Felis catus	Eukaryota	Chordata	Mammalia	Laurasiatheria	Felidae	Felis	Felis catus
+Canis lupus familiaris	Eukaryota	Chordata	Mammalia	Laurasiatheria	Canidae	Canis	Canis lupus
+Mustela putorius furo	Eukaryota	Chordata	Mammalia	Laurasiatheria	Mustelidae	Mustela	Mustela putorius
+Ailuropoda melanoleuca	Eukaryota	Chordata	Mammalia	Laurasiatheria	Ursidae	Ailuropoda	Ailuropoda melanoleuca
+Equus caballus	Eukaryota	Chordata	Mammalia	Laurasiatheria	Equidae	Equus	Equus caballus
+Vicugna pacos	Eukaryota	Chordata	Mammalia	Laurasiatheria	Camelidae	Vicugna	Vicugna pacos
+Sus scrofa	Eukaryota	Chordata	Mammalia	Laurasiatheria	Suidae	Sus	Sus scrofa
+Tursiops truncatus	Eukaryota	Chordata	Mammalia	Laurasiatheria	Delphinidae	Tursiops	Tursiops truncatus
+Ovis aries	Eukaryota	Chordata	Mammalia	Laurasiatheria	Bovidae	Ovis	Ovis aries
+Bos taurus	Eukaryota	Chordata	Mammalia	Laurasiatheria	Bovidae	Bos	Bos taurus
+Anolis carolinensis	Eukaryota	Chordata	NA	Lepidosauria	Dactyloidae	Anolis	Anolis carolinensis
+Pelodiscus sinensis	Eukaryota	Chordata	NA	Testudines	Trionychidae	Pelodiscus	Pelodiscus sinensis
+Taeniopygia guttata	Eukaryota	Chordata	Aves	Neognathae	Passeroidea	Taeniopygia	Taeniopygia guttata
+Ficedula albicollis	Eukaryota	Chordata	Aves	Neognathae	Muscicapidae	Ficedula	Ficedula albicollis
+Anas platyrhynchos	Eukaryota	Chordata	Aves	Neognathae	Anatidae	Anas	Anas platyrhynchos
+Meleagris gallopavo	Eukaryota	Chordata	Aves	Neognathae	Phasianidae	Meleagris	Meleagris gallopavo
+Gallus gallus	Eukaryota	Chordata	Aves	Neognathae	Phasianidae	Gallus	Gallus gallus
+Lepisosteus oculatus	Eukaryota	Chordata	Actinopterygii	Semionotiformes	Lepisosteidae	Lepisosteus	Lepisosteus oculatus
+Danio rerio	Eukaryota	Chordata	Actinopterygii	Cypriniphysae	Cyprinoidea	Danio	Danio rerio
+Astyanax mexicanus	Eukaryota	Chordata	Actinopterygii	Characiphysae	Characidae	Astyanax	Astyanax mexicanus
+Gadus morhua	Eukaryota	Chordata	Actinopterygii	Gadiformes	Gadidae	Gadus	Gadus morhua
+Oreochromis niloticus	Eukaryota	Chordata	Actinopterygii	Cichlomorphae	Cichlidae	Oreochromis	Oreochromis niloticus
+Poecilia formosa	Eukaryota	Chordata	Actinopterygii	Atherinomorphae	Poeciliidae	Poecilia	Poecilia formosa
+Xiphophorus maculatus	Eukaryota	Chordata	Actinopterygii	Atherinomorphae	Poeciliidae	Xiphophorus	Xiphophorus maculatus
+Gasterosteus aculeatus	Eukaryota	Chordata	Actinopterygii	Perciformes	Gasterosteidae	Gasterosteus	Gasterosteus aculeatus
+Tetraodon nigroviridis	Eukaryota	Chordata	Actinopterygii	Tetraodontiformes	Tetradontoidea	Tetraodon	Tetraodon nigroviridis
+Takifugu rubripes	Eukaryota	Chordata	Actinopterygii	Tetraodontiformes	Tetradontoidea	Takifugu	Takifugu rubripes