Mercurial > repos > earlhaminst > ete
diff test-data/lineage-compress.txt @ 2:03c10736e497 draft
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 91b634b8f9b131045bbbbf43cc8edbea59ac686b-dirty
| author | earlhaminst |
|---|---|
| date | Tue, 07 Nov 2017 11:45:13 -0500 |
| parents | |
| children | 87b6de3ef63e |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/lineage-compress.txt Tue Nov 07 11:45:13 2017 -0500 @@ -0,0 +1,62 @@ +Latimeria chalumnae Eukaryota Chordata NA Coelacanthiformes Coelacanthidae Latimeria Latimeria chalumnae +Xenopus tropicalis Eukaryota Chordata Amphibia Batrachia Pipoidea Xenopus Xenopus tropicalis +Ornithorhynchus anatinus Eukaryota Chordata Mammalia Monotremata Ornithorhynchidae Ornithorhynchus Ornithorhynchus anatinus +Macropus eugenii Eukaryota Chordata Mammalia Diprotodontia Macropodidae Notamacropus Notamacropus eugenii +Sarcophilus harrisii Eukaryota Chordata Mammalia Dasyuromorphia Dasyuridae Sarcophilus Sarcophilus harrisii +Monodelphis domestica Eukaryota Chordata Mammalia Didelphimorphia Didelphidae Monodelphis Monodelphis domestica +Echinops telfairi Eukaryota Chordata Mammalia Afrotheria Tenrecidae Echinops Echinops telfairi +Procavia capensis Eukaryota Chordata Mammalia Afrotheria Procaviidae Procavia Procavia capensis +Loxodonta africana Eukaryota Chordata Mammalia Afrotheria Elephantidae Loxodonta Loxodonta africana +Dasypus novemcinctus Eukaryota Chordata Mammalia Xenarthra Dasypodidae Dasypus Dasypus novemcinctus +Choloepus hoffmanni Eukaryota Chordata Mammalia Xenarthra Megalonychidae Choloepus Choloepus hoffmanni +Ochotona princeps Eukaryota Chordata Mammalia Euarchontoglires Ochotonidae Ochotona Ochotona princeps +Oryctolagus cuniculus Eukaryota Chordata Mammalia Euarchontoglires Leporidae Oryctolagus Oryctolagus cuniculus +Cavia porcellus Eukaryota Chordata Mammalia Euarchontoglires Caviidae Cavia Cavia porcellus +Ictidomys tridecemlineatus Eukaryota Chordata Mammalia Euarchontoglires Sciuridae Ictidomys Ictidomys tridecemlineatus +Dipodomys ordii Eukaryota Chordata Mammalia Euarchontoglires Heteromyidae Dipodomys Dipodomys ordii +Rattus norvegicus Eukaryota Chordata Mammalia Euarchontoglires Muridae Rattus Rattus norvegicus +Mus musculus Eukaryota Chordata Mammalia Euarchontoglires Muridae Mus Mus musculus +Tupaia belangeri Eukaryota Chordata Mammalia Euarchontoglires Tupaiidae Tupaia Tupaia belangeri +Otolemur garnettii Eukaryota Chordata Mammalia Euarchontoglires Galagidae Otolemur Otolemur garnettii +Microcebus murinus Eukaryota Chordata Mammalia Euarchontoglires Cheirogaleidae Microcebus Microcebus murinus +Tarsius syrichta Eukaryota Chordata Mammalia Euarchontoglires Tarsiidae Carlito Carlito syrichta +Callithrix jacchus Eukaryota Chordata Mammalia Euarchontoglires Cebidae Callithrix Callithrix jacchus +Chlorocebus sabaeus Eukaryota Chordata Mammalia Euarchontoglires Cercopithecoidea Chlorocebus Chlorocebus sabaeus +Papio anubis Eukaryota Chordata Mammalia Euarchontoglires Cercopithecoidea Papio Papio anubis +Macaca mulatta Eukaryota Chordata Mammalia Euarchontoglires Cercopithecoidea Macaca Macaca mulatta +Nomascus leucogenys Eukaryota Chordata Mammalia Euarchontoglires Hominoidea Nomascus Nomascus leucogenys +Pongo abelii Eukaryota Chordata Mammalia Euarchontoglires Hominoidea Pongo Pongo abelii +Gorilla gorilla gorilla Eukaryota Chordata Mammalia Euarchontoglires Hominoidea Gorilla Gorilla gorilla +Pan troglodytes Eukaryota Chordata Mammalia Euarchontoglires Hominoidea Pan Pan troglodytes +Homo sapiens Eukaryota Chordata Mammalia Euarchontoglires Hominoidea Homo Homo sapiens +Sorex araneus Eukaryota Chordata Mammalia Laurasiatheria Soricidae Sorex Sorex araneus +Erinaceus europaeus Eukaryota Chordata Mammalia Laurasiatheria Erinaceidae Erinaceus Erinaceus europaeus +Pteropus vampyrus Eukaryota Chordata Mammalia Laurasiatheria Pteropodidae Pteropus Pteropus vampyrus +Myotis lucifugus Eukaryota Chordata Mammalia Laurasiatheria Vespertilionidae Myotis Myotis lucifugus +Felis catus Eukaryota Chordata Mammalia Laurasiatheria Felidae Felis Felis catus +Canis lupus familiaris Eukaryota Chordata Mammalia Laurasiatheria Canidae Canis Canis lupus +Mustela putorius furo Eukaryota Chordata Mammalia Laurasiatheria Mustelidae Mustela Mustela putorius +Ailuropoda melanoleuca Eukaryota Chordata Mammalia Laurasiatheria Ursidae Ailuropoda Ailuropoda melanoleuca +Equus caballus Eukaryota Chordata Mammalia Laurasiatheria Equidae Equus Equus caballus +Vicugna pacos Eukaryota Chordata Mammalia Laurasiatheria Camelidae Vicugna Vicugna pacos +Sus scrofa Eukaryota Chordata Mammalia Laurasiatheria Suidae Sus Sus scrofa +Tursiops truncatus Eukaryota Chordata Mammalia Laurasiatheria Delphinidae Tursiops Tursiops truncatus +Ovis aries Eukaryota Chordata Mammalia Laurasiatheria Bovidae Ovis Ovis aries +Bos taurus Eukaryota Chordata Mammalia Laurasiatheria Bovidae Bos Bos taurus +Anolis carolinensis Eukaryota Chordata NA Lepidosauria Dactyloidae Anolis Anolis carolinensis +Pelodiscus sinensis Eukaryota Chordata NA Testudines Trionychidae Pelodiscus Pelodiscus sinensis +Taeniopygia guttata Eukaryota Chordata Aves Neognathae Passeroidea Taeniopygia Taeniopygia guttata +Ficedula albicollis Eukaryota Chordata Aves Neognathae Muscicapidae Ficedula Ficedula albicollis +Anas platyrhynchos Eukaryota Chordata Aves Neognathae Anatidae Anas Anas platyrhynchos +Meleagris gallopavo Eukaryota Chordata Aves Neognathae Phasianidae Meleagris Meleagris gallopavo +Gallus gallus Eukaryota Chordata Aves Neognathae Phasianidae Gallus Gallus gallus +Lepisosteus oculatus Eukaryota Chordata Actinopterygii Semionotiformes Lepisosteidae Lepisosteus Lepisosteus oculatus +Danio rerio Eukaryota Chordata Actinopterygii Cypriniphysae Cyprinoidea Danio Danio rerio +Astyanax mexicanus Eukaryota Chordata Actinopterygii Characiphysae Characidae Astyanax Astyanax mexicanus +Gadus morhua Eukaryota Chordata Actinopterygii Gadiformes Gadidae Gadus Gadus morhua +Oreochromis niloticus Eukaryota Chordata Actinopterygii Cichlomorphae Cichlidae Oreochromis Oreochromis niloticus +Poecilia formosa Eukaryota Chordata Actinopterygii Atherinomorphae Poeciliidae Poecilia Poecilia formosa +Xiphophorus maculatus Eukaryota Chordata Actinopterygii Atherinomorphae Poeciliidae Xiphophorus Xiphophorus maculatus +Gasterosteus aculeatus Eukaryota Chordata Actinopterygii Perciformes Gasterosteidae Gasterosteus Gasterosteus aculeatus +Tetraodon nigroviridis Eukaryota Chordata Actinopterygii Tetraodontiformes Tetradontoidea Tetraodon Tetraodon nigroviridis +Takifugu rubripes Eukaryota Chordata Actinopterygii Tetraodontiformes Tetradontoidea Takifugu Takifugu rubripes