Mercurial > repos > earlhaminst > ete
diff test-data/lineage-wid.txt @ 6:f1eca1158f21 draft
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 133bb57feca9672734d664e6b34e428488cf2e73
author | earlhaminst |
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date | Wed, 10 Oct 2018 05:24:04 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/lineage-wid.txt Wed Oct 10 05:24:04 2018 -0400 @@ -0,0 +1,63 @@ +# query taxid kingdom phylum class order family genus species +Latimeria chalumnae 7897 Eukaryota Chordata NA Coelacanthiformes Coelacanthidae Latimeria Latimeria chalumnae +Xenopus tropicalis 8364 Eukaryota Chordata Amphibia Batrachia Pipoidea Xenopus Xenopus tropicalis +Ornithorhynchus anatinus 9258 Eukaryota Chordata Mammalia Monotremata Ornithorhynchidae Ornithorhynchus Ornithorhynchus anatinus +Macropus eugenii 9315 Eukaryota Chordata Mammalia Diprotodontia Macropodidae Notamacropus Notamacropus eugenii +Sarcophilus harrisii 9305 Eukaryota Chordata Mammalia Dasyuromorphia Dasyuridae Sarcophilus Sarcophilus harrisii +Monodelphis domestica 13616 Eukaryota Chordata Mammalia Didelphimorphia Didelphidae Monodelphis Monodelphis domestica +Echinops telfairi 9371 Eukaryota Chordata Mammalia Afrotheria Tenrecidae Echinops Echinops telfairi +Procavia capensis 9813 Eukaryota Chordata Mammalia Afrotheria Procaviidae Procavia Procavia capensis +Loxodonta africana 9785 Eukaryota Chordata Mammalia Afrotheria Elephantidae Loxodonta Loxodonta africana +Dasypus novemcinctus 9361 Eukaryota Chordata Mammalia Xenarthra Dasypodidae Dasypus Dasypus novemcinctus +Choloepus hoffmanni 9358 Eukaryota Chordata Mammalia Xenarthra Megalonychidae Choloepus Choloepus hoffmanni +Ochotona princeps 9978 Eukaryota Chordata Mammalia Euarchontoglires Ochotonidae Ochotona Ochotona princeps +Oryctolagus cuniculus 9986 Eukaryota Chordata Mammalia Euarchontoglires Leporidae Oryctolagus Oryctolagus cuniculus +Cavia porcellus 10141 Eukaryota Chordata Mammalia Euarchontoglires Caviidae Cavia Cavia porcellus +Ictidomys tridecemlineatus 43179 Eukaryota Chordata Mammalia Euarchontoglires Sciuridae Ictidomys Ictidomys tridecemlineatus +Dipodomys ordii 10020 Eukaryota Chordata Mammalia Euarchontoglires Heteromyidae Dipodomys Dipodomys ordii +Rattus norvegicus 10116 Eukaryota Chordata Mammalia Euarchontoglires Muridae Rattus Rattus norvegicus +Mus musculus 10090 Eukaryota Chordata Mammalia Euarchontoglires Muridae Mus Mus musculus +Tupaia belangeri 37347 Eukaryota Chordata Mammalia Euarchontoglires Tupaiidae Tupaia Tupaia belangeri +Otolemur garnettii 30611 Eukaryota Chordata Mammalia Euarchontoglires Galagidae Otolemur Otolemur garnettii +Microcebus murinus 30608 Eukaryota Chordata Mammalia Euarchontoglires Cheirogaleidae Microcebus Microcebus murinus +Tarsius syrichta 1868482 Eukaryota Chordata Mammalia Euarchontoglires Tarsiidae Carlito Carlito syrichta +Callithrix jacchus 9483 Eukaryota Chordata Mammalia Euarchontoglires Cebidae Callithrix Callithrix jacchus +Chlorocebus sabaeus 60711 Eukaryota Chordata Mammalia Euarchontoglires Cercopithecoidea Chlorocebus Chlorocebus sabaeus +Papio anubis 9555 Eukaryota Chordata Mammalia Euarchontoglires Cercopithecoidea Papio Papio anubis +Macaca mulatta 9544 Eukaryota Chordata Mammalia Euarchontoglires Cercopithecoidea Macaca Macaca mulatta +Nomascus leucogenys 61853 Eukaryota Chordata Mammalia Euarchontoglires Hominoidea Nomascus Nomascus leucogenys +Pongo abelii 9601 Eukaryota Chordata Mammalia Euarchontoglires Hominoidea Pongo Pongo abelii +Gorilla gorilla gorilla 9595 Eukaryota Chordata Mammalia Euarchontoglires Hominoidea Gorilla Gorilla gorilla +Pan troglodytes 9598 Eukaryota Chordata Mammalia Euarchontoglires Hominoidea Pan Pan troglodytes +Homo sapiens 9606 Eukaryota Chordata Mammalia Euarchontoglires Hominoidea Homo Homo sapiens +Sorex araneus 42254 Eukaryota Chordata Mammalia Laurasiatheria Soricidae Sorex Sorex araneus +Erinaceus europaeus 9365 Eukaryota Chordata Mammalia Laurasiatheria Erinaceidae Erinaceus Erinaceus europaeus +Pteropus vampyrus 132908 Eukaryota Chordata Mammalia Laurasiatheria Pteropodidae Pteropus Pteropus vampyrus +Myotis lucifugus 59463 Eukaryota Chordata Mammalia Laurasiatheria Vespertilionidae Myotis Myotis lucifugus +Felis catus 9685 Eukaryota Chordata Mammalia Laurasiatheria Felidae Felis Felis catus +Canis lupus familiaris 9615 Eukaryota Chordata Mammalia Laurasiatheria Canidae Canis Canis lupus +Mustela putorius furo 9669 Eukaryota Chordata Mammalia Laurasiatheria Mustelidae Mustela Mustela putorius +Ailuropoda melanoleuca 9646 Eukaryota Chordata Mammalia Laurasiatheria Ursidae Ailuropoda Ailuropoda melanoleuca +Equus caballus 9796 Eukaryota Chordata Mammalia Laurasiatheria Equidae Equus Equus caballus +Vicugna pacos 30538 Eukaryota Chordata Mammalia Laurasiatheria Camelidae Vicugna Vicugna pacos +Sus scrofa 9823 Eukaryota Chordata Mammalia Laurasiatheria Suidae Sus Sus scrofa +Tursiops truncatus 9739 Eukaryota Chordata Mammalia Laurasiatheria Delphinidae Tursiops Tursiops truncatus +Ovis aries 9940 Eukaryota Chordata Mammalia Laurasiatheria Bovidae Ovis Ovis aries +Bos taurus 9913 Eukaryota Chordata Mammalia Laurasiatheria Bovidae Bos Bos taurus +Anolis carolinensis 28377 Eukaryota Chordata NA Lepidosauria Dactyloidae Anolis Anolis carolinensis +Pelodiscus sinensis 13735 Eukaryota Chordata NA Testudines Trionychidae Pelodiscus Pelodiscus sinensis +Taeniopygia guttata 59729 Eukaryota Chordata Aves Neognathae Passeroidea Taeniopygia Taeniopygia guttata +Ficedula albicollis 59894 Eukaryota Chordata Aves Neognathae Muscicapidae Ficedula Ficedula albicollis +Anas platyrhynchos 8839 Eukaryota Chordata Aves Neognathae Anatidae Anas Anas platyrhynchos +Meleagris gallopavo 9103 Eukaryota Chordata Aves Neognathae Phasianidae Meleagris Meleagris gallopavo +Gallus gallus 9031 Eukaryota Chordata Aves Neognathae Phasianidae Gallus Gallus gallus +Lepisosteus oculatus 7918 Eukaryota Chordata Actinopterygii Semionotiformes Lepisosteidae Lepisosteus Lepisosteus oculatus +Danio rerio 7955 Eukaryota Chordata Actinopterygii Cypriniphysae Cyprinoidea Danio Danio rerio +Astyanax mexicanus 7994 Eukaryota Chordata Actinopterygii Characiphysae Characidae Astyanax Astyanax mexicanus +Gadus morhua 8049 Eukaryota Chordata Actinopterygii Gadiformes Gadidae Gadus Gadus morhua +Oreochromis niloticus 8128 Eukaryota Chordata Actinopterygii Cichlomorphae Cichlidae Oreochromis Oreochromis niloticus +Poecilia formosa 48698 Eukaryota Chordata Actinopterygii Atherinomorphae Poeciliidae Poecilia Poecilia formosa +Xiphophorus maculatus 8083 Eukaryota Chordata Actinopterygii Atherinomorphae Poeciliidae Xiphophorus Xiphophorus maculatus +Gasterosteus aculeatus 69293 Eukaryota Chordata Actinopterygii Perciformes Gasterosteidae Gasterosteus Gasterosteus aculeatus +Tetraodon nigroviridis 99883 Eukaryota Chordata Actinopterygii Tetraodontiformes Tetradontoidea Tetraodon Tetraodon nigroviridis +Takifugu rubripes 31033 Eukaryota Chordata Actinopterygii Tetraodontiformes Tetradontoidea Takifugu Takifugu rubripes