Mercurial > repos > earlhaminst > export_to_cluster
comparison export_to_cluster.py @ 4:ddd9749d3b00 draft default tip
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/main/tools/export_to_cluster/ commit 457bb20f9c1c007b42d79b08527f5c558529ab8a-dirty
| author | earlhaminst |
|---|---|
| date | Mon, 24 Feb 2025 17:06:57 +0000 |
| parents | 9838eed606ad |
| children |
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| 3:9838eed606ad | 4:ddd9749d3b00 |
|---|---|
| 35 dataset_exts = args[2::3] | 35 dataset_exts = args[2::3] |
| 36 exit_code = 0 | 36 exit_code = 0 |
| 37 for dp, dn, de in zip(dataset_paths, dataset_names, dataset_exts): | 37 for dp, dn, de in zip(dataset_paths, dataset_names, dataset_exts): |
| 38 """ | 38 """ |
| 39 Copied from get_valid_filename from django | 39 Copied from get_valid_filename from django |
| 40 https://github.com/django/django/blob/master/django/utils/text.py | 40 https://github.com/django/django/blob/main/django/utils/text.py |
| 41 """ | 41 """ |
| 42 dn_de = "%s.%s" % (dn, de) | 42 dn_de = "%s.%s" % (dn, de) |
| 43 dn_de_safe = re.sub(r'(?u)[^-\w.]', '', dn_de.strip().replace(' ', '_')) | 43 dn_de_safe = re.sub(r'(?u)[^-\w.]', '', dn_de.strip().replace(' ', '_')) |
| 44 dest = os.path.join(real_export_dir, dn_de_safe) | 44 dest = os.path.join(real_export_dir, dn_de_safe) |
| 45 try: | 45 try: |