Mercurial > repos > earlhaminst > export_to_cluster
view export_to_cluster.xml @ 5:8b8466d30d50 draft default tip
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/main/tools/export_to_cluster/ commit d96cd7ee9c686c185b6734aa08ab5a891cc44149-dirty
author | earlhaminst |
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date | Mon, 03 Mar 2025 17:49:27 +0000 |
parents | 9838eed606ad |
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<tool id="export_to_cluster" name="Export datasets to cluster" version="0.1.0"> <requirements> <requirement type="package" version="3.13">python</requirement> <requirement type="set_environment">EXPORT_DIR_PREFIX</requirement> </requirements> <command detect_errors="aggressive"><![CDATA[ python3 '$__tool_directory__/export_to_cluster.py' -d '$export_dir' -p "\$EXPORT_DIR_PREFIX" #for $d in $datasets '${d}' '${d.hid}: ${d.element_identifier}' '${d.ext}' #end for > '$log' ]]></command> <inputs> <param name="datasets" type="data" format="data" multiple="true" label="Datasets to export" /> <param name="export_dir" type="text" value="" label="Directory where to export the datasets" help="Must be writable by the Galaxy user"> <validator type="empty_field" /> <sanitizer sanitize="false" /> </param> </inputs> <outputs> <data name="log" format="txt" /> </outputs> <tests> </tests> <help><![CDATA[ Simple tool to copy datasets to a directory on the cluster. ]]></help> <citations/> </tool>