Mercurial > repos > earlhaminst > geneseqtofamily

annotate GeneFamilies_GeneSeqToFamily.ga @ 5:06470b2e491f draft

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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
author earlhaminst
date Mon, 25 Jun 2018 18:50:55 -0400
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children
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5
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
diff changeset
1 {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
diff changeset
2 "a_galaxy_workflow": "true",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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3 "annotation": "",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
diff changeset
4 "format-version": "0.1",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
diff changeset
5 "name": "GeneFamilies_GeneSeqToFamily",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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6 "steps": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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7 "0": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
diff changeset
8 "annotation": "",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
diff changeset
9 "content_id": null,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
diff changeset
10 "errors": null,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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11 "id": 0,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
diff changeset
12 "input_connections": {},
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
diff changeset
13 "inputs": [
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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14 {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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15 "description": "",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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16 "name": "CDS"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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17 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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18 ],
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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19 "label": "CDS",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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20 "name": "Input dataset",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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21 "outputs": [],
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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22 "position": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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23 "left": 200,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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24 "top": 390.5
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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25 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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26 "tool_id": null,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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27 "tool_state": "{\"name\": \"CDS\"}",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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28 "tool_version": null,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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29 "type": "data_input",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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30 "uuid": "d2777a78-6429-47f6-9567-cb15140ace8d",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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31 "workflow_outputs": [
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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32 {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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33 "label": null,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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34 "output_name": "output",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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35 "uuid": "7eedd485-b41e-4b55-9359-9f7e56d84f54"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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36 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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37 ]
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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38 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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39 "1": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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40 "annotation": "",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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41 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: transeq101/5.0.0",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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42 "errors": null,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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43 "id": 1,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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44 "input_connections": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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45 "input1": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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46 "id": 0,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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47 "output_name": "output"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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48 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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49 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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50 "inputs": [
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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51 {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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52 "description": "runtime parameter for tool transeq",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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53 "name": "input1"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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54 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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55 ],
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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56 "label": null,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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57 "name": "transeq",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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58 "outputs": [
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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59 {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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60 "name": "out_file1",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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61 "type": "fasta"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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62 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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63 ],
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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64 "position": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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65 "left": 460.0625,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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66 "top": 324.5
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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67 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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68 "post_job_actions": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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69 "HideDatasetActionout_file1": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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70 "action_arguments": {},
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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71 "action_type": "HideDatasetAction",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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72 "output_name": "out_file1"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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73 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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74 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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75 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: transeq101/5.0.0",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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76 "tool_shed_repository": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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77 "changeset_revision": "1b6538ec8b56",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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78 "name": "emboss_5",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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79 "owner": "devteam",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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80 "tool_shed": "toolshed.g2.bx.psu.edu"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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81 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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82 "tool_state": "{\"trim\": \"\\\"no\\\"\", \"__page__\": null, \"input1\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"out_format1\": \"\\\"fasta\\\"\", \"frame\": \"\\\"1\\\"\", \"regions\": \"\\\"\\\"\", \"clean\": \"\\\"no\\\"\", \"table\": \"\\\"0\\\"\", \"alternative\": \"\\\"no\\\"\", \"__rerun_remap_job_id__\": null}",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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parents:
diff changeset
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06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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84 "type": "tool",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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86 "workflow_outputs": []
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earlhaminst
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diff changeset
87 },
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88 "2": {
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89 "annotation": "",
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92 "id": 2,
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93 "input_connections": {
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94 "input_file": {
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95 "id": 1,
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96 "output_name": "out_file1"
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97 }
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98 },
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100 {
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101 "description": "runtime parameter for tool NCBI BLAST+ makeblastdb",
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102 "name": "mask_data_file"
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103 },
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earlhaminst
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104 {
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105 "description": "runtime parameter for tool NCBI BLAST+ makeblastdb",
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106 "name": "input_file"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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107 }
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108 ],
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109 "label": null,
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110 "name": "NCBI BLAST+ makeblastdb",
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112 {
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113 "name": "outfile",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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114 "type": "data"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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115 }
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116 ],
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117 "position": {
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118 "left": 689.171875,
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earlhaminst
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120 },
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121 "post_job_actions": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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122 "HideDatasetActionoutfile": {
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123 "action_arguments": {},
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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124 "action_type": "HideDatasetAction",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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125 "output_name": "outfile"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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126 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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127 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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128 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.1.08",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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129 "tool_shed_repository": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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130 "changeset_revision": "6f386c5dc4fb",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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131 "name": "ncbi_blast_plus",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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132 "owner": "devteam",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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133 "tool_shed": "toolshed.g2.bx.psu.edu"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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134 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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135 "tool_state": "{\"__page__\": null, \"mask_data_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"dbtype\": \"\\\"prot\\\"\", \"__rerun_remap_job_id__\": null, \"hash_index\": \"\\\"true\\\"\", \"tax\": \"{\\\"__current_case__\\\": 0, \\\"taxselect\\\": \\\"\\\"}\", \"title\": \"\\\"\\\"\", \"parse_seqids\": \"\\\"false\\\"\"}",
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earlhaminst
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136 "tool_version": "0.2.01",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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137 "type": "tool",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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138 "uuid": "c72477fb-cc1d-45ec-a0cd-8215be8fe8ee",
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earlhaminst
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139 "workflow_outputs": []
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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140 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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141 "3": {
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earlhaminst
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142 "annotation": "",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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143 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastp_wrapper/0.2.01",
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earlhaminst
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144 "errors": null,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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145 "id": 3,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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146 "input_connections": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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147 "db_opts|histdb": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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148 "id": 2,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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149 "output_name": "outfile"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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150 },
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earlhaminst
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151 "query": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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152 "id": 1,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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153 "output_name": "out_file1"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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154 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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155 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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156 "inputs": [
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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157 {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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158 "description": "runtime parameter for tool NCBI BLAST+ blastp",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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159 "name": "db_opts"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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160 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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161 {
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earlhaminst
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162 "description": "runtime parameter for tool NCBI BLAST+ blastp",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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163 "name": "query"
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164 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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165 ],
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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166 "label": null,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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169 {
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06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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177 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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180 "action_arguments": {},
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181 "action_type": "HideDatasetAction",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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182 "output_name": "output1"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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183 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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184 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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earlhaminst
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06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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188 "name": "ncbi_blast_plus",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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189 "owner": "devteam",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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191 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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194 "type": "tool",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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196 "workflow_outputs": []
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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197 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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199 "annotation": "",
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204 "input": {
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205 "id": 3,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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206 "output_name": "output1"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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207 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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208 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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diff changeset
209 "inputs": [
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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210 {
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211 "description": "runtime parameter for tool BLAST parser",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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212 "name": "input"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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213 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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214 ],
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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216 "name": "BLAST parser",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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217 "outputs": [
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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218 {
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219 "name": "output",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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220 "type": "tabular"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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221 }
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222 ],
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223 "position": {
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226 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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228 "tool_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/blast_parser/blast_parser/0.1.1",
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229 "tool_shed_repository": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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230 "changeset_revision": "363f3480622d",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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231 "name": "blast_parser",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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232 "owner": "earlhaminst",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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233 "tool_shed": "toolshed.g2.bx.psu.edu"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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234 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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235 "tool_state": "{\"input\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"reciprocal\": \"\\\"true\\\"\", \"__page__\": null}",
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236 "tool_version": "0.1.2",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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237 "type": "tool",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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238 "uuid": "3eb98d54-a52d-4605-b068-28a700290d92",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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239 "workflow_outputs": [
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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240 {
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06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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242 "output_name": "output",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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244 }
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earlhaminst
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06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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246 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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247 "5": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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248 "annotation": "",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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249 "content_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/hcluster_sg/hcluster_sg/0.5.1",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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250 "errors": null,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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251 "id": 5,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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252 "input_connections": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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253 "inputFile": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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254 "id": 4,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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255 "output_name": "output"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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256 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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257 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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258 "inputs": [
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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259 {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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260 "description": "runtime parameter for tool hcluster_sg",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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261 "name": "c_conditional"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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262 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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263 {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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264 "description": "runtime parameter for tool hcluster_sg",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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265 "name": "inputFile"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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266 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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267 ],
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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268 "label": null,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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269 "name": "hcluster_sg",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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270 "outputs": [
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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271 {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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272 "name": "outputFile",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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273 "type": "tabular"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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274 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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275 ],
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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276 "position": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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277 "left": 1462.921875,
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
parents:
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278 "top": 331.5
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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279 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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280 "post_job_actions": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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281 "HideDatasetActionoutputFile": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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282 "action_arguments": {},
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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283 "action_type": "HideDatasetAction",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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284 "output_name": "outputFile"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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285 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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286 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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287 "tool_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/hcluster_sg/hcluster_sg/0.5.1",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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288 "tool_shed_repository": {
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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289 "changeset_revision": "1d2de27d7a9c",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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290 "name": "hcluster_sg",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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291 "owner": "earlhaminst",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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292 "tool_shed": "toolshed.g2.bx.psu.edu"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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293 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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294 "tool_state": "{\"__page__\": null, \"__rerun_remap_job_id__\": null, \"c_conditional\": \"{\\\"c\\\": \\\"\\\", \\\"b\\\": \\\"0.1\\\", \\\"m\\\": \\\"500\\\", \\\"C\\\": {\\\"__class__\\\": \\\"RuntimeValue\\\"}, \\\"O\\\": {\\\"O_selector\\\": \\\"\\\", \\\"__current_case__\\\": 1}, \\\"L\\\": \\\"2\\\", \\\"s\\\": \\\"0.34\\\", \\\"__current_case__\\\": 1}\", \"w\": \"\\\"0\\\"\", \"inputFile\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\"}",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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295 "tool_version": "0.5.1.1",
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earlhaminst
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296 "type": "tool",
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earlhaminst
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297 "uuid": "d2b2ba89-b47d-4241-8adf-0d780f834412",
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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298 "workflow_outputs": []
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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299 }
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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300 },
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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301 "tags": [],
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
earlhaminst
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302 "uuid": "5bad18ae-08f1-4da5-b375-5a43d0440616"
06470b2e491f planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 2c7c545579169dda723cd7d91d9ccef1c5061fed
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303 }