diff GeneSeqToFamily.ga @ 6:266800d51605 draft

"planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 3dbeddc06c9d15aadcc66a7eb7376c29da9233a3"
author earlhaminst
date Thu, 10 Jun 2021 16:18:59 +0000
parents cc5419f7dff7
children e732a731f778
line wrap: on
line diff
--- a/GeneSeqToFamily.ga	Mon Jun 25 18:50:55 2018 -0400
+++ b/GeneSeqToFamily.ga	Thu Jun 10 16:18:59 2021 +0000
@@ -20,8 +20,8 @@
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@@ -45,26 +45,26 @@
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@@ -77,26 +77,26 @@
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@@ -818,18 +842,18 @@
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             ], 
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-                "left": 1299.921875, 
-                "top": 747.5
+                "left": 2184.890625, 
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             "tool_shed_repository": {
-                "changeset_revision": "c388666f58e0", 
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                 "name": "gafa", 
                 "owner": "earlhaminst", 
                 "tool_shed": "toolshed.g2.bx.psu.edu"
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+            "tool_state": "{\"__page__\": null, \"treeFile\": \"{\\\"__class__\\\": \\\"ConnectedValue\\\"}\", \"__rerun_remap_job_id__\": null, \"alignmentFile\": \"{\\\"__class__\\\": \\\"ConnectedValue\\\"}\", \"genesFile\": \"{\\\"__class__\\\": \\\"ConnectedValue\\\"}\"}", 
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@@ -840,8 +864,91 @@
                     "uuid": "a3dbb7a3-356a-4019-a10d-08896e990c8e"
                 }
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+        }, 
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+            "annotation": "", 
+            "content_id": "__FLATTEN__", 
+            "errors": null, 
+            "id": 19, 
+            "input_connections": {
+                "input": {
+                    "id": 17, 
+                    "output_name": "genetrees_lists"
+                }
+            }, 
+            "inputs": [], 
+            "label": null, 
+            "name": "Flatten Collection", 
+            "outputs": [
+                {
+                    "name": "output", 
+                    "type": "input"
+                }
+            ], 
+            "position": {
+                "left": 2206.984375, 
+                "top": 1024.96875
+            }, 
+            "post_job_actions": {
+                "HideDatasetActionoutput": {
+                    "action_arguments": {}, 
+                    "action_type": "HideDatasetAction", 
+                    "output_name": "output"
+                }
+            }, 
+            "tool_id": "__FLATTEN__", 
+            "tool_state": "{\"input\": \"{\\\"__class__\\\": \\\"ConnectedValue\\\"}\", \"__rerun_remap_job_id__\": null, \"join_identifier\": \"\\\"_\\\"\", \"__page__\": null}", 
+            "tool_version": "1.0.0", 
+            "type": "tool", 
+            "uuid": "5f6a95f6-1036-4a33-b610-a080b971a324", 
+            "workflow_outputs": []
+        }, 
+        "20": {
+            "annotation": "", 
+            "content_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/ete/ete_homology_classifier/3.1.1", 
+            "errors": null, 
+            "id": 20, 
+            "input_connections": {
+                "genetreeFile": {
+                    "id": 19, 
+                    "output_name": "output"
+                }
+            }, 
+            "inputs": [], 
+            "label": null, 
+            "name": "Homology Classifier and Filter", 
+            "outputs": [
+                {
+                    "name": "homology", 
+                    "type": "tabular"
+                }
+            ], 
+            "position": {
+                "left": 2341.984375, 
+                "top": 1160.96875
+            }, 
+            "post_job_actions": {}, 
+            "tool_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/ete/ete_homology_classifier/3.1.1", 
+            "tool_shed_repository": {
+                "changeset_revision": "6a5282f71f82", 
+                "name": "ete", 
+                "owner": "earlhaminst", 
+                "tool_shed": "toolshed.g2.bx.psu.edu"
+            }, 
+            "tool_state": "{\"__page__\": null, \"__rerun_remap_job_id__\": null, \"genetreeFile\": \"{\\\"__class__\\\": \\\"ConnectedValue\\\"}\", \"format_type\": \"{\\\"__current_case__\\\": 0, \\\"homologies\\\": [\\\"one-to-one\\\", \\\"one-to-many\\\", \\\"many-to-one\\\", \\\"many-to-many\\\", \\\"paralogs\\\"], \\\"out_format\\\": \\\"tabular\\\"}\"}", 
+            "tool_version": "3.1.1", 
+            "type": "tool", 
+            "uuid": "427c5e21-0ed7-41b9-8e2b-447ea99e5c29", 
+            "workflow_outputs": [
+                {
+                    "label": null, 
+                    "output_name": "homology", 
+                    "uuid": "d20dba82-b0c5-41d7-9f2e-f67240548967"
+                }
+            ]
         }
     }, 
     "tags": [], 
-    "uuid": "bbf45200-b853-41bf-a853-abb1dec8ca9d"
+    "uuid": "45eedb69-98b5-4ea2-9f17-791fa54ef823", 
+    "version": 20
 }
\ No newline at end of file